RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 A8MWL6 223 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 H3BVH4 76 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 CIDEAO60543 219 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 SH2D1AO60880 128 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 RNASE1P07998 156 aaKnown RBP4.06□□□□□ -1.76
CD47-201ENST00000355354 GATA4P43694 442 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 LINC01545Q5VT33 79 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 CLEC2AQ6UVW9 174 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 TEX29Q8N6K0 151 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 IL19Q9UHD0 177 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 LOC100131303A0A0U1RQF7 123 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 CXorf1O96002 111 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 CLEC19AQ6UXS0 136 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 ZNF625Q96I27 306 aaPredicted RBP4.06□□□□□ -1.76
CD47-201ENST00000355354 COMMD5Q9GZQ3 224 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 GFRA4Q9GZZ7 299 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 JPT1Q9UK76 154 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 IGHV3-38A0A0C4DH36 116 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 CTXN2P0C2S0 81 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 XGP55808 180 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 SMIM21Q3B7S5 101 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 SOSTDC1Q6X4U4 206 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 TXN2Q99757 166 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 PSG8Q9UQ74 426 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 CD7P09564 240 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 TRPT1Q86TN4 253 aaKnown RBP4.06□□□□□ -1.76
CD47-201ENST00000355354 VAMP8Q9BV40 100 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 GNB1LQ9BYB4 327 aa4.06□□□□□ -1.76
CD47-201ENST00000355354 OCIAD2Q56VL3 154 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 IFNA1P01562 189 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 S100A12P80511 92 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 ECSCRQ19T08 205 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 PLEKHA3Q9HB20 300 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 IGHV3-16A0A0C4DH30 117 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 C9JCJ5 164 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 M0R381 172 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 GIG44P09565 113 aaPredicted RBP4.05□□□□□ -1.76
CD47-201ENST00000355354 ZNF22P17026 224 aaPredicted RBP4.05□□□□□ -1.76
CD47-201ENST00000355354 SMAGPQ0VAQ4 97 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 Q8N6K4 173 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 APCSP02743 223 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 MT-ATP8P03928 68 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 ARL3P36405 182 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 C10orf126Q8N4M7 172 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 ZNF714Q96N38 554 aa4.05□□□□□ -1.76
CD47-201ENST00000355354 B9A039 149 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 IGHV4-59P01825 116 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 Q8IYB0 196 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 OSTCQ9NRP0 149 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 C11orf86A6NJI1 115 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 RAB31Q13636 194 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 RNF125Q96EQ8 232 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 ONECUT1Q9UBC0 465 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 IGHV1-69-2A0A0G2JMI3 117 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 C7orf71A4D174 169 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 CD3EP07766 207 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 CEACAM3P40198 252 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 ATP5J2P56134 94 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 OR4C13Q8NGP0 309 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 IGLV4-69A0A075B6H9 119 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 TRAV9-2A0A087WT02 112 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 GNG7O60262 68 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 LEPROTL1O95214 131 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 ERVK-16P61578 105 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 CATR1Q13166 79 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 APRG1Q8IVJ8 170 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 TIMD4Q96H15 378 aa4.04□□□□□ -1.76
CD47-201ENST00000355354 CT45A10P0DMU9 189 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 UBE2G1P62253 170 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 LINC01356Q8N9X3 169 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 THAP8Q8NA92 274 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 KRTAP17-1Q9BYP8 105 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 BET1LQ9NYM9 111 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 FAM90A26D6RGX4 464 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 TSTD3H0UI37 97 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 FUSP35637 526 aaKnown RBP eCLIP4.03□□□□□ -1.76
CD47-201ENST00000355354 COX6A2Q02221 97 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 BOD1L2Q8IYS8 172 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 OR1L8Q8NGR8 309 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 OSR1Q8TAX0 266 aaPredicted RBP4.03□□□□□ -1.76
CD47-201ENST00000355354 CHODLQ9H9P2 273 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 TIMM9Q9Y5J7 89 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 A0A0G2JQZ4 141 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 A0A1W2PNN7 141 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 MOB1BQ7L9L4 216 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 OR10X1Q8NGY0 326 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 LINC00312Q9Y6C7 94 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 NCBP2LA6PVI3 153 aaKnown RBP4.03□□□□□ -1.76
CD47-201ENST00000355354 NDUFA3O95167 84 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 ZNF688P0C7X2 276 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 RHOBP62745 196 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 C10orf113Q5VZT2 155 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 SIRPDQ9H106 197 aa4.03□□□□□ -1.76
CD47-201ENST00000355354 NHP2Q9NX24 153 aaKnown RBP4.03□□□□□ -1.76
CD47-201ENST00000355354 TMEM238C9JI98 176 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 J3QLI3 93 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 SYNJ2BPP57105 145 aa4.02□□□□□ -1.77
CD47-201ENST00000355354 DEFB4AO15263 64 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms