RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 TMEM136Q6ZRR5 245 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 OR2D3Q8NGH3 330 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 NDFIP1Q9BT67 221 aa11.59□□□□□ -0.55
RAB5C-201ENST00000346213 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
RAB5C-201ENST00000346213 A0A0J9YX75 114 aa11.58□□□□□ -0.56
RAB5C-201ENST00000346213 SNURFLB1AK76 121 aa11.58□□□□□ -0.56
RAB5C-201ENST00000346213 SPINK4O60575 86 aa11.58□□□□□ -0.56
RAB5C-201ENST00000346213 FOXA3P55318 350 aaPredicted RBP11.58□□□□□ -0.56
RAB5C-201ENST00000346213 ANKRD39Q53RE8 183 aa11.58□□□□□ -0.56
RAB5C-201ENST00000346213 COA6Q5JTJ3 125 aaKnown RBP11.58□□□□□ -0.56
RAB5C-201ENST00000346213 MRPL54Q6P161 138 aaKnown RBP11.58□□□□□ -0.56
RAB5C-201ENST00000346213 C9orf47Q6ZRZ4 202 aa11.58□□□□□ -0.56
RAB5C-201ENST00000346213 ATP5L2Q7Z4Y8 100 aa11.58□□□□□ -0.56
RAB5C-201ENST00000346213 A8MTW9 85 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 ERCC8Q13216 396 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 FAM162BQ5T6X4 162 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 SAMD13Q5VXD3 122 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 MORN3Q6PF18 240 aaPredicted RBP11.57□□□□□ -0.56
RAB5C-201ENST00000346213 FOXI2Q6ZQN5 318 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 GTSF1Q8WW33 167 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 AGPAT4-IT1Q9H0P7 198 aa11.57□□□□□ -0.56
RAB5C-201ENST00000346213 HLA-DQA1P01909 254 aa11.56□□□□□ -0.56
RAB5C-201ENST00000346213 NUTF2P61970 127 aaKnown RBP11.56□□□□□ -0.56
RAB5C-201ENST00000346213 Q8TAT8 98 aa11.56□□□□□ -0.56
RAB5C-201ENST00000346213 NDUFAF3Q9BU61 184 aa11.56□□□□□ -0.56
RAB5C-201ENST00000346213 SH2D1AO60880 128 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 PRM2P04554 102 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 TMEM78Q5T7P6 136 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 CEMP1Q6PRD7 247 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-201ENST00000346213 OR10D4PQ8NGN7 298 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 A0A1B0GXF2 115 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 XKRY2A2RUG3 117 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 ZNF138P52744 262 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 ZNF705AQ6ZN79 300 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-201ENST00000346213 C1orf158Q8N1D5 194 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 HIST3H2BBQ8N257 126 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 ZNF738Q8NE65 137 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 PHLDA1Q8WV24 401 aaPredicted RBP11.55□□□□□ -0.56
RAB5C-201ENST00000346213 LENEPQ9Y5L5 61 aa11.55□□□□□ -0.56
RAB5C-201ENST00000346213 IFITM10A6NMD0 228 aa11.54□□□□□ -0.56
RAB5C-201ENST00000346213 LINC00477Q96M19 166 aa11.54□□□□□ -0.56
RAB5C-201ENST00000346213 TMEM189A5PLL7 270 aa11.53□□□□□ -0.56
RAB5C-201ENST00000346213 FABP5P3A8MUU1 101 aa11.53□□□□□ -0.56
RAB5C-201ENST00000346213 GZMBP10144 247 aa11.53□□□□□ -0.56
RAB5C-201ENST00000346213 ZNF80P51504 273 aaPredicted RBP11.53□□□□□ -0.56
RAB5C-201ENST00000346213 Q6AWC8 147 aa11.53□□□□□ -0.56
RAB5C-201ENST00000346213 LINC00476Q8WZB0 136 aa11.53□□□□□ -0.56
RAB5C-201ENST00000346213 PGLYRP4Q96LB8 373 aa11.53□□□□□ -0.56
RAB5C-201ENST00000346213 CRXO43186 299 aaPredicted RBP11.52□□□□□ -0.56
RAB5C-201ENST00000346213 ID1P41134 155 aa11.52□□□□□ -0.56
RAB5C-201ENST00000346213 RPS20P60866 119 aaKnown RBP11.52□□□□□ -0.56
RAB5C-201ENST00000346213 JOSD1Q15040 202 aaPredicted RBP11.52□□□□□ -0.56
RAB5C-201ENST00000346213 GFI1BQ5VTD9 330 aa11.52□□□□□ -0.56
RAB5C-201ENST00000346213 C11orf45Q8TAV5 145 aa11.52□□□□□ -0.56
RAB5C-201ENST00000346213 HBBP68871 147 aa11.52□□□□□ -0.57
RAB5C-201ENST00000346213 GAGE1Q13065 139 aa11.52□□□□□ -0.57
RAB5C-201ENST00000346213 Q6ZTC4 211 aa11.52□□□□□ -0.57
RAB5C-201ENST00000346213 OR10J6PQ8NGY7 276 aa11.52□□□□□ -0.57
RAB5C-201ENST00000346213 CLUHP3Q96NS8 147 aa11.52□□□□□ -0.57
RAB5C-201ENST00000346213 M0R2Z0 102 aa11.51□□□□□ -0.57
RAB5C-201ENST00000346213 MIFP14174 115 aa11.51□□□□□ -0.57
RAB5C-201ENST00000346213 KIR3DS1Q14943 382 aa11.51□□□□□ -0.57
RAB5C-201ENST00000346213 FRAS1Q86XX4 4008 aa11.51□□□□□ -0.57
RAB5C-201ENST00000346213 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
RAB5C-201ENST00000346213 APCSP02743 223 aa11.5□□□□□ -0.57
RAB5C-201ENST00000346213 LINC00614P0C842 121 aa11.5□□□□□ -0.57
RAB5C-201ENST00000346213 CRISP2P16562 243 aa11.5□□□□□ -0.57
RAB5C-201ENST00000346213 HIST1H1AQ02539 215 aaPredicted RBP11.5□□□□□ -0.57
RAB5C-201ENST00000346213 IGHV3OR16-12A0A075B7B8 117 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 A0A1B0GUT8 65 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 CAMPP49913 170 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 SPINK13Q1W4C9 94 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 C12orf74Q32Q52 190 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 OR8A1Q8NGG7 326 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 TRBV7-9A0A0J9YWB2 115 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 A0A1B0GW15 77 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 Q0VG73 95 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 SLAQ13239 276 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 RIGQ13278 110 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 LINC01559Q495D7 138 aa11.49□□□□□ -0.57
RAB5C-201ENST00000346213 DNAH6Q9C0G6 4158 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 TRAV12-2A0A075B6T6 113 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 KIAA1644Q3SXP7 199 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 EBLN2Q6P2I7 272 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 ZNF575Q86XF7 245 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 GATD1Q8NB37 220 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 FAM19A4Q96LR4 140 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 PACRGQ96M98 296 aaPredicted RBP11.48□□□□□ -0.57
RAB5C-201ENST00000346213 DNAH10Q8IVF4 4471 aa11.48□□□□□ -0.57
RAB5C-201ENST00000346213 GRIFINA4D1Z8 144 aa11.47□□□□□ -0.57
RAB5C-201ENST00000346213 ORM1P02763 201 aa11.47□□□□□ -0.57
RAB5C-201ENST00000346213 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
RAB5C-201ENST00000346213 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
RAB5C-201ENST00000346213 LCE2DQ5TA82 110 aaPredicted RBP11.47□□□□□ -0.57
RAB5C-201ENST00000346213 BORCS7Q96B45 105 aa11.47□□□□□ -0.57
RAB5C-201ENST00000346213 TMSB15BA0A087X1C1 80 aa11.46□□□□□ -0.57
RAB5C-201ENST00000346213 IGLC6P0CF74 106 aa11.46□□□□□ -0.57
RAB5C-201ENST00000346213 OR10J3Q5JRS4 329 aa11.46□□□□□ -0.57
RAB5C-201ENST00000346213 LYZL1Q6UWQ5 148 aa11.46□□□□□ -0.57
RAB5C-201ENST00000346213 HIST1H2BLQ99880 126 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms