RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 ZC2HC1AQ96GY0 325 aa9.86□□□□□ -0.83
HMGN3-202ENST00000344726 KANTRA0A1W2PQU2 76 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 RS1O15537 224 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 SRIP30626 198 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 PPT1P50897 306 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 ZNF506Q5JVG8 444 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 CFAP126Q5VTH2 177 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 FAM213BQ8TBF2 198 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 MBD3L1Q8WWY6 194 aa9.85□□□□□ -0.83
HMGN3-202ENST00000344726 A0A1B0GV50 99 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 FABP5P3A8MUU1 101 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 PAGE4O60829 102 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 ORM1P02763 201 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 CST9LP1Q5W188 147 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 TMUB2Q71RG4 321 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 STOML3Q8TAV4 291 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
HMGN3-202ENST00000344726 IGHV3-73A0A0B4J1V6 119 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 LINC00315P59091 139 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
HMGN3-202ENST00000344726 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 PCNPQ8WW12 178 aaKnown RBP9.83□□□□□ -0.84
HMGN3-202ENST00000344726 PTH2Q96A98 100 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
HMGN3-202ENST00000344726 TRBV6-1A0A0K0K1D8 114 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 C16orf90A8MZG2 172 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 SH2D1AO60880 128 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 LTAP01374 205 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 UBE2G1P62253 170 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 ZFP30Q9Y2G7 519 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
HMGN3-202ENST00000344726 B4DEV8 164 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 KRBOX1C9JBD0 128 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 M0R036 132 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 PFDN1O60925 122 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 GHRHP01286 108 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 ASIPP42127 132 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 SPATA12Q7Z6I5 190 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 TXNDC17Q9BRA2 123 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 JPT2Q9H910 190 aa9.81□□□□□ -0.84
HMGN3-202ENST00000344726 SCO2A0A1W2PP80 73 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 GRIFINA4D1Z8 144 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 H3BVH4 76 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 TPT1P13693 172 aaKnown RBP9.8□□□□□ -0.84
HMGN3-202ENST00000344726 BTF3P20290 206 aaKnown RBP9.8□□□□□ -0.84
HMGN3-202ENST00000344726 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
HMGN3-202ENST00000344726 AKR1C3P42330 323 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
HMGN3-202ENST00000344726 DNLZQ5SXM8 178 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 FAM162BQ5T6X4 162 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 Q6ZSN1 163 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 NHLRC2Q8NBF2 726 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 IL36BQ9NZH7 164 aa9.8□□□□□ -0.84
HMGN3-202ENST00000344726 TRBV6-4A0A1B0GX49 114 aa9.79□□□□□ -0.84
HMGN3-202ENST00000344726 CIDEAO60543 219 aa9.79□□□□□ -0.84
HMGN3-202ENST00000344726 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
HMGN3-202ENST00000344726 CCL20P78556 96 aa9.79□□□□□ -0.84
HMGN3-202ENST00000344726 TCTE3Q8IZS6 198 aa9.79□□□□□ -0.84
HMGN3-202ENST00000344726 PARLQ9H300 379 aa9.79□□□□□ -0.84
HMGN3-202ENST00000344726 ARMS2P0C7Q2 107 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 RHOHQ15669 191 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 UFSP1Q6NVU6 142 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 Q6ZNX1 250 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 SAMD10Q9BYL1 202 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
HMGN3-202ENST00000344726 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 DNAH10OSP0CZ25 163 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 TIRAPP58753 221 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 PRADC1Q9BSG0 188 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 MLST8Q9BVC4 326 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 SCRT2Q9NQ03 307 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 Q9UF83 564 aa9.77□□□□□ -0.85
HMGN3-202ENST00000344726 A8MWV9 139 aa9.76□□□□□ -0.85
HMGN3-202ENST00000344726 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
HMGN3-202ENST00000344726 MGST1P10620 155 aaKnown RBP9.76□□□□□ -0.85
HMGN3-202ENST00000344726 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
HMGN3-202ENST00000344726 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
HMGN3-202ENST00000344726 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
HMGN3-202ENST00000344726 C1QBP02746 253 aa9.75□□□□□ -0.85
HMGN3-202ENST00000344726 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
HMGN3-202ENST00000344726 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
HMGN3-202ENST00000344726 S100A9P06702 114 aaKnown RBP9.74□□□□□ -0.85
HMGN3-202ENST00000344726 SULT1A2P50226 295 aa9.74□□□□□ -0.85
HMGN3-202ENST00000344726 BAGE2Q86Y30 109 aa9.74□□□□□ -0.85
HMGN3-202ENST00000344726 C14orf178Q8N769 122 aaPredicted RBP9.74□□□□□ -0.85
HMGN3-202ENST00000344726 DERL1Q9BUN8 251 aa9.74□□□□□ -0.85
HMGN3-202ENST00000344726 GNG13Q9P2W3 67 aa9.74□□□□□ -0.85
HMGN3-202ENST00000344726 TRAV9-2A0A087WT02 112 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
HMGN3-202ENST00000344726 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 101.3 ms