RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MLST8Q9BVC4 326 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 H3BUA1 57 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 IGHV1-69P01742 117 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 MED14OSP0DP75 135 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 SPRNQ5BIV9 151 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 LINC00322Q6ZN03 302 aaPredicted RBP14.04□□□□□ -0.16
SMC4-201ENST00000344722 C1orf43Q9BWL3 253 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 RPL35AP18077 110 aaKnown RBP14.04□□□□□ -0.16
SMC4-201ENST00000344722 MRPL36Q9P0J6 103 aaKnown RBP14.04□□□□□ -0.16
SMC4-201ENST00000344722 XCL2Q9UBD3 114 aa14.04□□□□□ -0.16
SMC4-201ENST00000344722 F6UB75 175 aa14.03□□□□□ -0.16
SMC4-201ENST00000344722 CACNA1EQ15878 2313 aa14.03□□□□□ -0.16
SMC4-201ENST00000344722 INTS1Q8N201 2190 aaKnown RBP14.03□□□□□ -0.16
SMC4-201ENST00000344722 CRYGCP07315 174 aa14.03□□□□□ -0.16
SMC4-201ENST00000344722 MRPL23Q16540 153 aaKnown RBP14.03□□□□□ -0.16
SMC4-201ENST00000344722 NXPH4O95158 308 aa14.03□□□□□ -0.16
SMC4-201ENST00000344722 SPRY2O43597 315 aa14.02□□□□□ -0.16
SMC4-201ENST00000344722 CTSGP08311 255 aa14.02□□□□□ -0.16
SMC4-201ENST00000344722 EML6Q6ZMW3 1958 aa14.02□□□□□ -0.16
SMC4-201ENST00000344722 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.02□□□□□ -0.17
SMC4-201ENST00000344722 IGKV2-29A2NJV5 120 aaPredicted RBP14.02□□□□□ -0.17
SMC4-201ENST00000344722 C9orf47Q6ZRZ4 202 aa14.02□□□□□ -0.17
SMC4-201ENST00000344722 BRWD1-AS2P59051 145 aa14.02□□□□□ -0.17
SMC4-201ENST00000344722 IGKV1D-37A0A075B6S9 117 aa14.01□□□□□ -0.17
SMC4-201ENST00000344722 BUB3O43684 328 aa14.01□□□□□ -0.17
SMC4-201ENST00000344722 TEX22C9J3V5 150 aa14.01□□□□□ -0.17
SMC4-201ENST00000344722 LINC00643Q86TS7 51 aa14.01□□□□□ -0.17
SMC4-201ENST00000344722 CITED2Q99967 270 aaPredicted RBP14.01□□□□□ -0.17
SMC4-201ENST00000344722 IGKV3D-7A0A0C4DH55 119 aa14.01□□□□□ -0.17
SMC4-201ENST00000344722 RPL39P62891 51 aaKnown RBP14□□□□□ -0.17
SMC4-201ENST00000344722 IGFL3Q6UXB1 125 aa14□□□□□ -0.17
SMC4-201ENST00000344722 Q8N1Y9 231 aa14□□□□□ -0.17
SMC4-201ENST00000344722 C3orf56Q8N813 242 aa14□□□□□ -0.17
SMC4-201ENST00000344722 NDUFC2O95298 119 aa14□□□□□ -0.17
SMC4-201ENST00000344722 PRSS33Q8NF86 280 aa14□□□□□ -0.17
SMC4-201ENST00000344722 RNF114Q9Y508 228 aa14□□□□□ -0.17
SMC4-201ENST00000344722 E7EUB6 86 aa14□□□□□ -0.17
SMC4-201ENST00000344722 C11orf44Q8N8P7 122 aa14□□□□□ -0.17
SMC4-201ENST00000344722 SPATA25Q9BR10 227 aa14□□□□□ -0.17
SMC4-201ENST00000344722 CLEC2BQ92478 149 aa13.99□□□□□ -0.17
SMC4-201ENST00000344722 PRAC2D3DTV9 90 aa13.99□□□□□ -0.17
SMC4-201ENST00000344722 FAM215AQ9Y5M1 114 aa13.99□□□□□ -0.17
SMC4-201ENST00000344722 LINC01619G3V211 115 aa13.98□□□□□ -0.17
SMC4-201ENST00000344722 DEFB130BP0DP73 79 aa13.98□□□□□ -0.17
SMC4-201ENST00000344722 DEFB130AP0DP74 79 aa13.98□□□□□ -0.17
SMC4-201ENST00000344722 EIF4EBP1Q13541 118 aaPredicted RBP13.98□□□□□ -0.17
SMC4-201ENST00000344722 C2orf91Q6ZV80 131 aa13.98□□□□□ -0.17
SMC4-201ENST00000344722 NUP210Q8TEM1 1887 aaPredicted RBP13.98□□□□□ -0.17
SMC4-201ENST00000344722 ZNF407Q9C0G0 2248 aa13.97□□□□□ -0.17
SMC4-201ENST00000344722 C16orf54Q6UWD8 224 aa13.97□□□□□ -0.17
SMC4-201ENST00000344722 IGHG2P01859 326 aa13.96□□□□□ -0.17
SMC4-201ENST00000344722 PSMB8P28062 276 aa13.96□□□□□ -0.17
SMC4-201ENST00000344722 SND1-IT1Q9HBX3 110 aa13.96□□□□□ -0.17
SMC4-201ENST00000344722 UQCRQO14949 82 aa13.96□□□□□ -0.18
SMC4-201ENST00000344722 IGHV7-81A0A0B4J1V7 117 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 CRYGBP07316 175 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 HOXB4P17483 251 aaPredicted RBP13.95□□□□□ -0.18
SMC4-201ENST00000344722 CFHR3Q02985 330 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 APC2O95996 2303 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 IGLC6P0CF74 106 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 GATA3P23771 443 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 NSUN5P1Q3KNT7 163 aa13.95□□□□□ -0.18
SMC4-201ENST00000344722 U3KQK5 164 aa13.94□□□□□ -0.18
SMC4-201ENST00000344722 TRAV25A0A0B4J276 109 aa13.94□□□□□ -0.18
SMC4-201ENST00000344722 AKAP6Q13023 2319 aa13.94□□□□□ -0.18
SMC4-201ENST00000344722 IGHV1-58A0A0C4DH39 117 aa13.93□□□□□ -0.18
SMC4-201ENST00000344722 hADV29S1A0JD25 119 aa13.93□□□□□ -0.18
SMC4-201ENST00000344722 PROP1O75360 226 aa13.93□□□□□ -0.18
SMC4-201ENST00000344722 ZNF561-AS1K7EIQ3 104 aa13.93□□□□□ -0.18
SMC4-201ENST00000344722 MSMBP08118 114 aa13.93□□□□□ -0.18
SMC4-201ENST00000344722 ARHGAP21Q5T5U3 1957 aa13.93□□□□□ -0.18
SMC4-201ENST00000344722 HOXD3P31249 432 aaPredicted RBP13.92□□□□□ -0.18
SMC4-201ENST00000344722 LINC01356Q8N9X3 169 aa13.92□□□□□ -0.18
SMC4-201ENST00000344722 JMJD7-PLA2G4BH0Y9G9 81 aa13.92□□□□□ -0.18
SMC4-201ENST00000344722 CDK2AP2O75956 126 aa13.92□□□□□ -0.18
SMC4-201ENST00000344722 IGKV2D-26A0A0A0MRZ7 120 aa13.92□□□□□ -0.18
SMC4-201ENST00000344722 NEXN-AS1Q8NBZ9 246 aa13.92□□□□□ -0.18
SMC4-201ENST00000344722 NOTCH4Q99466 2003 aa13.92□□□□□ -0.18
SMC4-201ENST00000344722 NBL1P41271 181 aa13.91□□□□□ -0.18
SMC4-201ENST00000344722 DAND5Q8N907 189 aa13.91□□□□□ -0.18
SMC4-201ENST00000344722 C5orf47Q569G3 176 aa13.91□□□□□ -0.18
SMC4-201ENST00000344722 Q8N976 141 aa13.91□□□□□ -0.18
SMC4-201ENST00000344722 TEX49A0A1B0GTD5 131 aa13.91□□□□□ -0.18
SMC4-201ENST00000344722 ZDBF2Q9HCK1 2354 aa13.9□□□□□ -0.18
SMC4-201ENST00000344722 LINC00310P59036 64 aa13.9□□□□□ -0.18
SMC4-201ENST00000344722 MIAQ16674 131 aa13.9□□□□□ -0.18
SMC4-201ENST00000344722 U3KQE9 123 aa13.9□□□□□ -0.18
SMC4-201ENST00000344722 ZNF80P51504 273 aaPredicted RBP13.9□□□□□ -0.18
SMC4-201ENST00000344722 WNK2Q9Y3S1 2297 aa13.9□□□□□ -0.18
SMC4-201ENST00000344722 MAPKAPK5-AS1Q8N8E1 139 aa13.9□□□□□ -0.18
SMC4-201ENST00000344722 DOCK7Q96N67 2140 aa13.9□□□□□ -0.19
SMC4-201ENST00000344722 IGHV3-30-3P0DP02 117 aa13.89□□□□□ -0.19
SMC4-201ENST00000344722 C3orf22Q8N5N4 141 aa13.89□□□□□ -0.19
SMC4-201ENST00000344722 H3BQ85 93 aa13.89□□□□□ -0.19
SMC4-201ENST00000344722 IGLV1-47P01700 117 aa13.89□□□□□ -0.19
SMC4-201ENST00000344722 C20orf203Q8NBC4 194 aa13.89□□□□□ -0.19
SMC4-201ENST00000344722 CENPVL3A0A0U1RRI6 287 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 P0DMU3 169 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 FAM231AP0DMU4 169 aa13.88□□□□□ -0.19
SMC4-201ENST00000344722 FAM231CP0DMU5 169 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms