RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CD24P25063 80 aa5.59□□□□□ -1.52
ZNF540-202ENST00000343599 CDAP32320 146 aa5.59□□□□□ -1.52
ZNF540-202ENST00000343599 CACNG7P62955 275 aa5.59□□□□□ -1.52
ZNF540-202ENST00000343599 CASC10Q5T4H9 136 aa5.59□□□□□ -1.52
ZNF540-202ENST00000343599 PRADC1Q9BSG0 188 aa5.59□□□□□ -1.52
ZNF540-202ENST00000343599 FOXA2Q9Y261 457 aaPredicted RBP5.59□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF256Q9Y2P7 627 aaPredicted RBP5.59□□□□□ -1.52
ZNF540-202ENST00000343599 M0R2P5 195 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 ORM2P19652 201 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 GATD1Q8NB37 220 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 BORCS8Q96FH0 119 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF414Q96IQ9 312 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 MXRA5Q9NR99 2828 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 IGKV2D-26A0A0A0MRZ7 120 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 TRAV24A0A0B4J272 114 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 FAM229AH3BQW9 127 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 VCYO14598 125 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 TMEM219Q86XT9 240 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 C5orf56Q8N8D9 126 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 OR8A1Q8NGG7 326 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 FLYWCH2Q96CP2 140 aaKnown RBP5.58□□□□□ -1.52
ZNF540-202ENST00000343599 SGK494Q96LW2 274 aa5.58□□□□□ -1.52
ZNF540-202ENST00000343599 C11orf68Q9H3H3 251 aaKnown RBP5.58□□□□□ -1.52
ZNF540-202ENST00000343599 UBE2D3P61077 147 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 UBE2D2P62837 147 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 Q6ZQT7 251 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF503Q96F45 646 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 HHLA3Q9XRX5 114 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 LINC01548A6NM66 108 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 EMC6Q9BV81 110 aa5.57□□□□□ -1.52
ZNF540-202ENST00000343599 A8MWV9 139 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 IGHV3-9P01782 118 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 PSMB8P28062 276 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 ANKRD29Q8N6D5 301 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF714Q96N38 554 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 RPP21Q9H633 154 aaKnown RBP5.56□□□□□ -1.52
ZNF540-202ENST00000343599 TRBV7-3A0A075B6L6 115 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 IGKV1D-17A0A075B6S4 117 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 WI2-2373I1.2A0A1W2PRP0 233 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 ASPHD1Q5U4P2 390 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 MIR17HGQ75NE6 70 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 WDR86Q86TI4 376 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 RFESDQ8TAC1 157 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 ODF3Q96PU9 254 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 DNAH9Q9NYC9 4486 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 SRRM4A7MD48 611 aaKnown RBP5.56□□□□□ -1.52
ZNF540-202ENST00000343599 K7EMI3 77 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 LYPD2Q6UXB3 125 aa5.56□□□□□ -1.52
ZNF540-202ENST00000343599 LY6HO94772 140 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 ORM1P02763 201 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 IL4P05112 153 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 CRYGDP07320 174 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 IGLC6P0CF74 106 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 C8orf88P0DMB2 117 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 EIF4EBP1Q13541 118 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-202ENST00000343599 LYRM7Q5U5X0 104 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 TMEM200BQ69YZ2 307 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 LINC01600Q96MT4 127 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 DUX3Q96PT4 197 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 SPANXDQ9BXN6 97 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 FREM1Q5H8C1 2179 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 OR2H2O95918 312 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 PSMB2P49721 201 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 HERVK_113P63121 156 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 Q6ZS46 218 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 C3orf22Q8N5N4 141 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 PRSS3P2Q8NHM4 247 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 IFI27L1Q96BM0 104 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 USMG5Q96IX5 58 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF488Q96MN9 340 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 TPSG1Q9NRR2 321 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF492Q9P255 531 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 FZR1Q9UM11 496 aa5.55□□□□□ -1.52
ZNF540-202ENST00000343599 TIMM8BQ9Y5J9 83 aaPredicted RBP5.55□□□□□ -1.52
ZNF540-202ENST00000343599 USP17L23D6RBM5 183 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 LYNX1G3V0Z9 82 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 LYNX1P0DP58 116 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 HES1Q14469 280 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 UTF1Q5T230 341 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 SLC25A2Q9BXI2 301 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 DKK2Q9UBU2 259 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 TRBV7-7A0A0K0K1E9 115 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 MYMXA0A1B0GTQ4 84 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 C19orf71A6NCJ1 209 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 BUB1B-PAK6H3BSN5 160 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 NBR2O15453 112 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 HBDP02042 147 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 EMP1P54849 157 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 PGLYRP4Q96LB8 373 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 CHCHD5Q9BSY4 110 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 KRTAP10-11P60412 298 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 LINC00526Q96FQ7 95 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 TTTY13Q9BZ97 58 aa5.54□□□□□ -1.52
ZNF540-202ENST00000343599 TRRAPQ9Y4A5 3859 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 H3BUX3 64 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 PEX7O00628 323 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 SCGB1C2P0DMR2 95 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 ZNF493Q6ZR52 646 aa5.53□□□□□ -1.52
ZNF540-202ENST00000343599 MLST8Q9BVC4 326 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms