RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 B4DSR2 109 aa11.5□□□□□ -0.57
RRP1B-201ENST00000340648 ZNF80P51504 273 aaPredicted RBP11.5□□□□□ -0.57
RRP1B-201ENST00000340648 ZFHX2Q9C0A1 2572 aaPredicted RBP11.5□□□□□ -0.57
RRP1B-201ENST00000340648 IGHV7-4-1A0A0J9YVY3 117 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 IFITM1P13164 125 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 ATG2AQ2TAZ0 1938 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 UTRNP46939 3433 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 HIST1H4AP62805 103 aaKnown RBP11.49□□□□□ -0.57
RRP1B-201ENST00000340648 PIP4P1Q86T03 277 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 LINC00574Q9H8X3 128 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 C10orf142B7Z368 130 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 PF4P02776 101 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 CARD19Q96LW7 228 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 INSP01308 110 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 GNLYP22749 145 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 TMEM86BQ8N661 226 aa11.49□□□□□ -0.57
RRP1B-201ENST00000340648 LGALS1P09382 135 aaKnown RBP11.48□□□□□ -0.57
RRP1B-201ENST00000340648 MALP21145 153 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 EDA2RQ9HAV5 297 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 LENEPQ9Y5L5 61 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 PCNTO95613 3336 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 PLXNB1O43157 2135 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 Q8N976 141 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 K7ENP7 123 aa11.48□□□□□ -0.57
RRP1B-201ENST00000340648 FANCD2OSQ96PS1 177 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 KIAA1549Q9HCM3 1950 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 CEP350Q5VT06 3117 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 HTN3P15516 51 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 DEFB1P60022 68 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 SUMO4Q6EEV6 95 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 C15orf53Q8NAA6 179 aa11.47□□□□□ -0.57
RRP1B-201ENST00000340648 RPL39P62891 51 aaKnown RBP11.46□□□□□ -0.57
RRP1B-201ENST00000340648 BAALCQ8WXS3 180 aa11.46□□□□□ -0.57
RRP1B-201ENST00000340648 B5MCH6 92 aa11.46□□□□□ -0.57
RRP1B-201ENST00000340648 MYCNOSP40205 109 aa11.46□□□□□ -0.57
RRP1B-201ENST00000340648 XCL2Q9UBD3 114 aa11.46□□□□□ -0.57
RRP1B-201ENST00000340648 HCFC1P51610 2035 aa11.46□□□□□ -0.57
RRP1B-201ENST00000340648 TRAV12-1A0A0B4J245 112 aa11.46□□□□□ -0.58
RRP1B-201ENST00000340648 ZFP2Q6ZN57 461 aa11.46□□□□□ -0.58
RRP1B-201ENST00000340648 A4D1N5 150 aa11.46□□□□□ -0.58
RRP1B-201ENST00000340648 C9orf153Q5TBE3 101 aa11.46□□□□□ -0.58
RRP1B-201ENST00000340648 C22orf34Q6ZV56 151 aa11.46□□□□□ -0.58
RRP1B-201ENST00000340648 Q8N9W7 124 aa11.46□□□□□ -0.58
RRP1B-201ENST00000340648 VWC2LB2RUY7 222 aa11.45□□□□□ -0.58
RRP1B-201ENST00000340648 FOXI1Q12951 378 aa11.45□□□□□ -0.58
RRP1B-201ENST00000340648 ZNF48Q96MX3 618 aaPredicted RBP11.45□□□□□ -0.58
RRP1B-201ENST00000340648 CENPVL3A0A0U1RRI6 287 aa11.45□□□□□ -0.58
RRP1B-201ENST00000340648 SS18L2Q9UHA2 77 aa11.45□□□□□ -0.58
RRP1B-201ENST00000340648 TEN1Q86WV5 123 aa11.45□□□□□ -0.58
RRP1B-201ENST00000340648 MSMBP08118 114 aa11.45□□□□□ -0.58
RRP1B-201ENST00000340648 RHODO00212 210 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 CRIP1P50238 77 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 PTH2Q96A98 100 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 E9PLD3 99 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 TOMM6Q96B49 74 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE12JA6NER3 117 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE4Q13068 117 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE5Q13069 117 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 C6orf226Q5I0X4 101 aa11.44□□□□□ -0.58
RRP1B-201ENST00000340648 A0A0J9YXV3 536 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 ZNRF2Q8NHG8 242 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 ANKHD1Q8IWZ3 2542 aaKnown RBP11.43□□□□□ -0.58
RRP1B-201ENST00000340648 IGKV2D-26A0A0A0MRZ7 120 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 RPL35AP18077 110 aaKnown RBP11.43□□□□□ -0.58
RRP1B-201ENST00000340648 MUSTN1Q8IVN3 82 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 C11orf86A6NJI1 115 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 RHOHQ15669 191 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 C2orf91Q6ZV80 131 aa11.43□□□□□ -0.58
RRP1B-201ENST00000340648 SPAG8Q99932 426 aaPredicted RBP11.43□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE7O76087 117 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE12FP0CL80 117 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE12GP0CL81 117 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE12IP0CL82 117 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 TCTEX1D4Q5JR98 221 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 S100A7L2Q5SY68 101 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 C9orf47Q6ZRZ4 202 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 ANKRD29Q8N6D5 301 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 C16orf54Q6UWD8 224 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 IGLC6P0CF74 106 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 MAPK1IP1LQ8NDC0 245 aa11.42□□□□□ -0.58
RRP1B-201ENST00000340648 SP5Q6BEB4 398 aaPredicted RBP11.42□□□□□ -0.58
RRP1B-201ENST00000340648 CPAMD8Q8IZJ3 1885 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 LRP4O75096 1905 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.41□□□□□ -0.58
RRP1B-201ENST00000340648 IGKV2-29A2NJV5 120 aaPredicted RBP11.41□□□□□ -0.58
RRP1B-201ENST00000340648 TANC2Q9HCD6 1990 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 IGLV2-11P01706 119 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 CFHR3Q02985 330 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 GAGE6Q13070 117 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 PTPRSQ13332 1948 aa11.41□□□□□ -0.58
RRP1B-201ENST00000340648 OVOL2Q9BRP0 275 aa11.4□□□□□ -0.58
RRP1B-201ENST00000340648 INAFM2P0DMQ5 153 aa11.4□□□□□ -0.58
RRP1B-201ENST00000340648 TECTAO75443 2155 aa11.4□□□□□ -0.58
RRP1B-201ENST00000340648 PFN2P35080 140 aa11.4□□□□□ -0.58
RRP1B-201ENST00000340648 DSCR9P59020 149 aa11.4□□□□□ -0.59
RRP1B-201ENST00000340648 BDP1A6H8Y1 2624 aa11.39□□□□□ -0.59
RRP1B-201ENST00000340648 URB1-AS1Q96HZ7 61 aa11.39□□□□□ -0.59
RRP1B-201ENST00000340648 JPT2Q9H910 190 aa11.39□□□□□ -0.59
RRP1B-201ENST00000340648 DSCAML1Q8TD84 2053 aa11.39□□□□□ -0.59
RRP1B-201ENST00000340648 CRYBA4P53673 196 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms