RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CRYBA4P53673 196 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 PRIMA1Q86XR5 153 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE12JA6NER3 117 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE7O76087 117 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE12FP0CL80 117 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE12GP0CL81 117 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE12IP0CL82 117 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE4Q13068 117 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 SMIM20Q8N5G0 67 aa10.95□□□□□ -0.66
EPHB3-201ENST00000330394 FAM110DQ8TAY7 271 aaPredicted RBP10.95□□□□□ -0.66
EPHB3-201ENST00000330394 ZNF80P51504 273 aaPredicted RBP10.95□□□□□ -0.66
EPHB3-201ENST00000330394 A0A1W2PRX2 142 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 FOXI1Q12951 378 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 ATG2AQ2TAZ0 1938 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 TEX22C9J3V5 150 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 C9orf153Q5TBE3 101 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 NDUFA12Q9UI09 145 aa10.94□□□□□ -0.66
EPHB3-201ENST00000330394 IGHV3-38A0A0C4DH36 116 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 CTSGP08311 255 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE5Q13069 117 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 GAGE6Q13070 117 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 MORN3Q6PF18 240 aaPredicted RBP10.93□□□□□ -0.66
EPHB3-201ENST00000330394 C2orf91Q6ZV80 131 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 HIVEP3Q5T1R4 2406 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 TRGV11A0A075B6L2 103 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 CFC1BP0CG36 223 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 CFC1P0CG37 223 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 HIGD1BQ9P298 99 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 CR1LQ2VPA4 569 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 KAAG1Q9UBP8 84 aa10.93□□□□□ -0.66
EPHB3-201ENST00000330394 A4D1N5 150 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 RPL39P62891 51 aaKnown RBP10.92□□□□□ -0.66
EPHB3-201ENST00000330394 CCL19Q99731 98 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 PAX4O43316 350 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 DNAH14Q0VDD8 3507 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 TEN1Q86WV5 123 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 CRYGCP07315 174 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 SYNJ2BPP57105 145 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 SEM1Q6ZVN7 128 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 CARD19Q96LW7 228 aa10.92□□□□□ -0.66
EPHB3-201ENST00000330394 DAZ1Q9NQZ3 744 aaKnown RBP10.92□□□□□ -0.66
EPHB3-201ENST00000330394 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
EPHB3-201ENST00000330394 MSRB2Q9Y3D2 182 aa10.91□□□□□ -0.66
EPHB3-201ENST00000330394 ZNF493Q6ZR52 646 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 TRPT1Q86TN4 253 aaKnown RBP10.9□□□□□ -0.66
EPHB3-201ENST00000330394 URB1-AS1Q96HZ7 61 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 TMEM141Q96I45 108 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 MUC22E2RYF6 1773 aaPredicted RBP10.9□□□□□ -0.66
EPHB3-201ENST00000330394 TRGV1A0A0A0MS02 117 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 GRNP28799 593 aaKnown RBP10.9□□□□□ -0.66
EPHB3-201ENST00000330394 CRIP1P50238 77 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 UCNP55089 124 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 ANKRD29Q8N6D5 301 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 CHCHD5Q9BSY4 110 aa10.9□□□□□ -0.66
EPHB3-201ENST00000330394 AGRNO00468 2067 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 SHISA9B4DS77 424 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 CRPP02741 224 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 ZFP2Q6ZN57 461 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 IGLV11-55A0A075B6I3 123 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 A0A0J9YXV3 536 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 C22orf34Q6ZV56 151 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 MAPKAPK5-AS1Q8N8E1 139 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 NAV2Q8IVL1 2488 aa10.89□□□□□ -0.67
EPHB3-201ENST00000330394 SP5Q6BEB4 398 aaPredicted RBP10.89□□□□□ -0.67
EPHB3-201ENST00000330394 BUB3O43684 328 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 MT-ATP8P03928 68 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 RBMY1BA6NDE4 496 aaKnown RBP10.88□□□□□ -0.67
EPHB3-201ENST00000330394 RBMY1EA6NEQ0 496 aaKnown RBP10.88□□□□□ -0.67
EPHB3-201ENST00000330394 IGLV1-47P01700 117 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 RBMY1DP0C7P1 496 aaKnown RBP10.88□□□□□ -0.67
EPHB3-201ENST00000330394 RBMY1A1P0DJD3 496 aaKnown RBP10.88□□□□□ -0.67
EPHB3-201ENST00000330394 RBMY1CP0DJD4 496 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 DEFB131AP59861 70 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 LY6DQ14210 128 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 HIVEP2P31629 2446 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 RBAKDNA6NC62 111 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 C11orf86A6NJI1 115 aa10.88□□□□□ -0.67
EPHB3-201ENST00000330394 LGALS1P09382 135 aaKnown RBP10.88□□□□□ -0.67
EPHB3-201ENST00000330394 ANKRD11Q6UB99 2663 aaPredicted RBP10.88□□□□□ -0.67
EPHB3-201ENST00000330394 INS-IGF2F8WCM5 200 aa10.87□□□□□ -0.67
EPHB3-201ENST00000330394 PTPRSQ13332 1948 aa10.87□□□□□ -0.67
EPHB3-201ENST00000330394 SPANXB1Q9NS25 103 aaPredicted RBP10.87□□□□□ -0.67
EPHB3-201ENST00000330394 IGHV7-81A0A0B4J1V7 117 aa10.87□□□□□ -0.67
EPHB3-201ENST00000330394 MUSTN1Q8IVN3 82 aa10.87□□□□□ -0.67
EPHB3-201ENST00000330394 STHQ8IWL8 128 aa10.87□□□□□ -0.67
EPHB3-201ENST00000330394 RNF183Q96D59 192 aa10.87□□□□□ -0.67
EPHB3-201ENST00000330394 I3L3M4 83 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 PIP4P2Q8N4L2 257 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 C8orf31Q8N9H6 132 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 DSCAMO60469 2012 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 UBE2E1P51965 193 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 CHD8Q9HCK8 2581 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 CITED1Q99966 193 aa10.86□□□□□ -0.67
EPHB3-201ENST00000330394 TRGV4A0A0C4DH28 118 aa10.85□□□□□ -0.67
EPHB3-201ENST00000330394 FAM223BA6NKX1 122 aa10.85□□□□□ -0.67
EPHB3-201ENST00000330394 INSL3P51460 131 aa10.85□□□□□ -0.67
EPHB3-201ENST00000330394 FAM223AQ8IWN6 122 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms