RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 Q8N976 141 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 AP5S1Q9NUS5 200 aa11.07□□□□□ -0.64
TPM3-205ENST00000328159 TCF21O43680 179 aa11.06□□□□□ -0.64
TPM3-205ENST00000328159 IFI27P40305 119 aaPredicted RBP11.06□□□□□ -0.64
TPM3-205ENST00000328159 PKIAP61925 76 aa11.06□□□□□ -0.64
TPM3-205ENST00000328159 TDRG1Q3Y452 100 aa11.06□□□□□ -0.64
TPM3-205ENST00000328159 LAMTOR2Q9Y2Q5 125 aa11.06□□□□□ -0.64
TPM3-205ENST00000328159 H3BMM0 161 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 CD7P09564 240 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 ZNF124Q15973 351 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 PRO1933Q9H354 126 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 ZNF256Q9Y2P7 627 aaPredicted RBP11.05□□□□□ -0.64
TPM3-205ENST00000328159 CUBNO60494 3623 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 GAS8-AS1O95177 125 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 NSUN5P1Q3KNT7 163 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 ZNF664Q8N3J9 261 aa11.05□□□□□ -0.64
TPM3-205ENST00000328159 MUC4Q99102 2169 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 IGHV1OR15-1A0A075B7D0 117 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 RBMY1BA6NDE4 496 aaKnown RBP11.04□□□□□ -0.64
TPM3-205ENST00000328159 RBMY1EA6NEQ0 496 aaKnown RBP11.04□□□□□ -0.64
TPM3-205ENST00000328159 TSTD3H0UI37 97 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 NXPH4O95158 308 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 LEPROTL1O95214 131 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 TNFRSF6BO95407 300 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 RBMY1DP0C7P1 496 aaKnown RBP11.04□□□□□ -0.64
TPM3-205ENST00000328159 FXYD7P58549 80 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 TEX43Q6ZNM6 134 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 MAP1LC3AQ9H492 121 aa11.04□□□□□ -0.64
TPM3-205ENST00000328159 SETXQ7Z333 2677 aaKnown RBP11.03□□□□□ -0.64
TPM3-205ENST00000328159 LINC00587B1AMM8 73 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 GATA1P15976 413 aaPredicted RBP11.03□□□□□ -0.64
TPM3-205ENST00000328159 BTF3P20290 206 aaKnown RBP11.03□□□□□ -0.64
TPM3-205ENST00000328159 KRTAP10-3P60369 221 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 IGHV3-16A0A0C4DH30 117 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 LINC00173Q6ZV60 143 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 OR2K2Q8NGT1 345 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 MRAP2Q96G30 205 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 DPH3P1Q9H4G8 78 aa11.03□□□□□ -0.64
TPM3-205ENST00000328159 TRAV26-2A0A0B4J265 109 aa11.02□□□□□ -0.65
TPM3-205ENST00000328159 CRXO43186 299 aaPredicted RBP11.02□□□□□ -0.65
TPM3-205ENST00000328159 ODF3L2Q3SX64 289 aa11.02□□□□□ -0.65
TPM3-205ENST00000328159 C14orf178Q8N769 122 aaPredicted RBP11.02□□□□□ -0.65
TPM3-205ENST00000328159 C9orf85Q96MD7 179 aa11.02□□□□□ -0.65
TPM3-205ENST00000328159 AP1S3Q96PC3 154 aa11.02□□□□□ -0.65
TPM3-205ENST00000328159 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
TPM3-205ENST00000328159 Q8N1Y9 231 aa11.01□□□□□ -0.65
TPM3-205ENST00000328159 NRACQ8N912 160 aa11.01□□□□□ -0.65
TPM3-205ENST00000328159 TMEM70Q9BUB7 260 aa11.01□□□□□ -0.65
TPM3-205ENST00000328159 HSPB8Q9UJY1 196 aa11.01□□□□□ -0.65
TPM3-205ENST00000328159 NSD1Q96L73 2696 aaPredicted RBP11.01□□□□□ -0.65
TPM3-205ENST00000328159 SAP30O75446 220 aa11□□□□□ -0.65
TPM3-205ENST00000328159 RBMY1A1P0DJD3 496 aaKnown RBP11□□□□□ -0.65
TPM3-205ENST00000328159 RBMY1CP0DJD4 496 aa11□□□□□ -0.65
TPM3-205ENST00000328159 RBMY1FQ15415 496 aaKnown RBP11□□□□□ -0.65
TPM3-205ENST00000328159 NXT2Q9NPJ8 142 aaKnown RBP11□□□□□ -0.65
TPM3-205ENST00000328159 MDFICQ9P1T7 246 aa11□□□□□ -0.65
TPM3-205ENST00000328159 FN1P02751 2386 aaKnown RBP11□□□□□ -0.65
TPM3-205ENST00000328159 A0A096LNJ9 63 aa11□□□□□ -0.65
TPM3-205ENST00000328159 LINC01546A6NGU7 62 aa11□□□□□ -0.65
TPM3-205ENST00000328159 CRLF1O75462 422 aa11□□□□□ -0.65
TPM3-205ENST00000328159 TRGV11A0A075B6L2 103 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 PRSS47A8MTI9 375 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 SYS1-DBNDD2H3BUS1 97 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 MGPP08493 103 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 CLUHP3Q96NS8 147 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 VAMP8Q9BV40 100 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 HIVEP1P15822 2718 aa10.99□□□□□ -0.65
TPM3-205ENST00000328159 KIR2DL5BA0A0G2JN68 375 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 KIR2DL5BA0A0G2JPC4 375 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 OR11H12B2RN74 326 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 SPATA12Q7Z6I5 190 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 KIR2DL5AQ8N109 375 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 DEFB125Q8N687 156 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 Q8N8P6 123 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 MAP1LC3CQ9BXW4 147 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 KIF25-AS1Q9Y6Z4 181 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 CBY3A6NI87 242 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 IGLV1-51P01701 117 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 HBDP02042 147 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 DDTP30046 118 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 POM121L12Q8N7R1 296 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 SYT8Q8NBV8 401 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 ZNF747Q9BV97 191 aa10.98□□□□□ -0.65
TPM3-205ENST00000328159 IGLV2-18A0A075B6J9 118 aa10.97□□□□□ -0.65
TPM3-205ENST00000328159 C2CD3Q4AC94 2353 aa10.97□□□□□ -0.65
TPM3-205ENST00000328159 SMIM17P0DL12 118 aa10.96□□□□□ -0.65
TPM3-205ENST00000328159 CMC4P56277 68 aaPredicted RBP10.96□□□□□ -0.65
TPM3-205ENST00000328159 LINC00315P59091 139 aa10.96□□□□□ -0.65
TPM3-205ENST00000328159 PET117Q6UWS5 81 aa10.96□□□□□ -0.65
TPM3-205ENST00000328159 RASL10AQ92737 203 aa10.96□□□□□ -0.65
TPM3-205ENST00000328159 JPT2Q9H910 190 aa10.96□□□□□ -0.65
TPM3-205ENST00000328159 PAM16Q9Y3D7 125 aa10.96□□□□□ -0.65
TPM3-205ENST00000328159 C20orf202A1L168 122 aa10.95□□□□□ -0.66
TPM3-205ENST00000328159 STHQ8IWL8 128 aa10.95□□□□□ -0.66
TPM3-205ENST00000328159 ATOH7Q8N100 152 aa10.95□□□□□ -0.66
TPM3-205ENST00000328159 C20orf144Q9BQM9 153 aa10.95□□□□□ -0.66
TPM3-205ENST00000328159 INSP01308 110 aa10.95□□□□□ -0.66
TPM3-205ENST00000328159 PF4P02776 101 aa10.95□□□□□ -0.66
TPM3-205ENST00000328159 TRPT1Q86TN4 253 aaKnown RBP10.95□□□□□ -0.66
TPM3-205ENST00000328159 FCER1GP30273 86 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms