RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 DPM2O94777 84 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 NPC2P61916 151 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 VCX2Q9H322 139 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 Q6ZQT7 251 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 BBC3Q96PG8 261 aaPredicted RBP8.46□□□□□ -1.06
TOP3A-201ENST00000321105 TTTY13Q9BZ97 58 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 PTPRBP23467 1997 aa8.46□□□□□ -1.06
TOP3A-201ENST00000321105 ZNF843Q8N446 348 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 JPT2Q9H910 190 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 DKK2Q9UBU2 259 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 IGKCP01834 107 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 GTF2H5Q6ZYL4 71 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 SPOCK3Q9BQ16 436 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 TNRC6BQ9UPQ9 1833 aaKnown RBP8.45□□□□□ -1.06
TOP3A-201ENST00000321105 TEX29Q8N6K0 151 aa8.45□□□□□ -1.06
TOP3A-201ENST00000321105 RPL39LQ96EH5 51 aaKnown RBP8.45□□□□□ -1.06
TOP3A-201ENST00000321105 LOXL1Q08397 574 aaPredicted RBP8.44□□□□□ -1.06
TOP3A-201ENST00000321105 SMIM12Q96EX1 92 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 KLF12Q9Y4X4 402 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 FAM231BA6NCW3 169 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 CHTOPQ9Y3Y2 248 aaKnown RBP8.44□□□□□ -1.06
TOP3A-201ENST00000321105 KLF2Q9Y5W3 355 aaPredicted RBP8.44□□□□□ -1.06
TOP3A-201ENST00000321105 IGHG2P01859 326 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 IGLC3P0DOY3 106 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 TMEM190Q8WZ59 177 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 LINC01619G3V211 115 aa8.44□□□□□ -1.06
TOP3A-201ENST00000321105 TRGV4A0A0C4DH28 118 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 H7C1H1 209 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 K7EMI3 77 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 CD28P10747 220 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 CDKN1BP46527 198 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 CRIP1P50238 77 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 COA6Q5JTJ3 125 aaKnown RBP8.43□□□□□ -1.06
TOP3A-201ENST00000321105 YPEL4Q96NS1 127 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 FABP2P12104 132 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 EDN2P20800 178 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 C19orf54Q5BKX5 351 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 ZNF815PA8K554 130 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 FOSL1P15407 271 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 ZNF124Q15973 351 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 ORMDL2Q53FV1 153 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 LBHQ53QV2 105 aaPredicted RBP8.43□□□□□ -1.06
TOP3A-201ENST00000321105 C2orf66Q6UXQ4 117 aa8.43□□□□□ -1.06
TOP3A-201ENST00000321105 SDHAF1A6NFY7 115 aa8.42□□□□□ -1.06
TOP3A-201ENST00000321105 MEIG1Q5JSS6 88 aa8.42□□□□□ -1.06
TOP3A-201ENST00000321105 PRM2P04554 102 aa8.42□□□□□ -1.06
TOP3A-201ENST00000321105 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
TOP3A-201ENST00000321105 MRPL35Q9NZE8 188 aaKnown RBP8.42□□□□□ -1.06
TOP3A-201ENST00000321105 VWC2LB2RUY7 222 aa8.42□□□□□ -1.06
TOP3A-201ENST00000321105 MRPL16Q9NX20 251 aaKnown RBP8.42□□□□□ -1.06
TOP3A-201ENST00000321105 TP53TG1Q9Y2A0 90 aa8.42□□□□□ -1.06
TOP3A-201ENST00000321105 LINC00469Q8N7U9 141 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 MLST8Q9BVC4 326 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 SMAD5-AS1Q9Y6J3 95 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 TRAV13-1A0A0B4J241 112 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 C19orf71A6NCJ1 209 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 C16orf54Q6UWD8 224 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 TRGV11A0A075B6L2 103 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 IGHV1OR15-1A0A075B7D0 117 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 A6NDX4 124 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 PPP1R17O96001 155 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 MRAP2Q96G30 205 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
TOP3A-201ENST00000321105 GCN1Q92616 2671 aaKnown RBP8.41□□□□□ -1.06
TOP3A-201ENST00000321105 A0A096LPF7 62 aa8.4□□□□□ -1.06
TOP3A-201ENST00000321105 SPXQ9BT56 116 aa8.4□□□□□ -1.06
TOP3A-201ENST00000321105 C11orf68Q9H3H3 251 aaKnown RBP8.4□□□□□ -1.06
TOP3A-201ENST00000321105 TRAV2A0A0B4J234 112 aa8.4□□□□□ -1.06
TOP3A-201ENST00000321105 ELANEP08246 267 aa8.4□□□□□ -1.06
TOP3A-201ENST00000321105 TMEM61Q8N0U2 210 aa8.4□□□□□ -1.06
TOP3A-201ENST00000321105 MTURNQ8N3F0 131 aa8.4□□□□□ -1.06
TOP3A-201ENST00000321105 CRYBG3Q68DQ2 2970 aa8.4□□□□□ -1.07
TOP3A-201ENST00000321105 PCP2Q8IVA1 136 aa8.4□□□□□ -1.07
TOP3A-201ENST00000321105 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.07
TOP3A-201ENST00000321105 ZNF747Q9BV97 191 aa8.4□□□□□ -1.07
TOP3A-201ENST00000321105 RNF114Q9Y508 228 aa8.4□□□□□ -1.07
TOP3A-201ENST00000321105 J3QLI3 93 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 SMIM13P0DJ93 91 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 COTL1Q14019 142 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 C18orf65Q6ZTR6 163 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE12BA1L429 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 CIDEAO60543 219 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE7O76087 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 LGALS1P09382 135 aaKnown RBP8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE12FP0CL80 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE12GP0CL81 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE12IP0CL82 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 SAMD13Q5VXD3 122 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 CCL24O00175 119 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 VCYO14598 125 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 C20orf173Q96LM9 149 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 C20orf144Q9BQM9 153 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 MDFICQ9P1T7 246 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE12JA6NER3 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE1Q13065 139 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE4Q13068 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE5Q13069 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 GAGE13Q4V321 117 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 MBD6Q96DN6 1003 aa8.39□□□□□ -1.07
TOP3A-201ENST00000321105 MUC4Q99102 2169 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms