RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 NHLRC2Q8NBF2 726 aa11.93□□□□□ -0.5
TUBB3-201ENST00000315491 WFDC10AQ9H1F0 79 aa11.93□□□□□ -0.5
TUBB3-201ENST00000315491 CST9LQ9H4G1 147 aa11.93□□□□□ -0.5
TUBB3-201ENST00000315491 CHTOPQ9Y3Y2 248 aaKnown RBP11.93□□□□□ -0.5
TUBB3-201ENST00000315491 SMIM27A0A1W2PRY6 76 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 IGKV3-20P01619 116 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 EGFEM1PQ0D2K5 195 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 SAMD5Q5TGI4 173 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 SMIM12Q96EX1 92 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 VPS25Q9BRG1 176 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 MLST8Q9BVC4 326 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 LENEPQ9Y5L5 61 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 G3V4G9 280 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 APCSP02743 223 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 FAM19A4Q96LR4 140 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 C8orf49Q96NF6 230 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 NOTCH3Q9UM47 2321 aa11.92□□□□□ -0.5
TUBB3-201ENST00000315491 A8MTW9 85 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 MGST1P10620 155 aaKnown RBP11.91□□□□□ -0.5
TUBB3-201ENST00000315491 KIAA1644Q3SXP7 199 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 STHQ8IWL8 128 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 C18orf32Q8TCD1 76 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 ODF3Q96PU9 254 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 CSTL1Q9H114 145 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 ST20Q9HBF5 79 aa11.91□□□□□ -0.5
TUBB3-201ENST00000315491 SORL1Q92673 2214 aa11.9□□□□□ -0.5
TUBB3-201ENST00000315491 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
TUBB3-201ENST00000315491 TAX1BP3O14907 124 aa11.9□□□□□ -0.5
TUBB3-201ENST00000315491 KRTAP10-11P60412 298 aa11.9□□□□□ -0.5
TUBB3-201ENST00000315491 DEFB125Q8N687 156 aa11.9□□□□□ -0.5
TUBB3-201ENST00000315491 RBMY1BA6NDE4 496 aaKnown RBP11.9□□□□□ -0.51
TUBB3-201ENST00000315491 RBMY1EA6NEQ0 496 aaKnown RBP11.9□□□□□ -0.51
TUBB3-201ENST00000315491 CBY3A6NI87 242 aa11.9□□□□□ -0.51
TUBB3-201ENST00000315491 RBMY1DP0C7P1 496 aaKnown RBP11.9□□□□□ -0.51
TUBB3-201ENST00000315491 FAM162BQ5T6X4 162 aa11.9□□□□□ -0.51
TUBB3-201ENST00000315491 AMTNQ6UX39 209 aa11.9□□□□□ -0.51
TUBB3-201ENST00000315491 COX8CQ7Z4L0 72 aa11.9□□□□□ -0.51
TUBB3-201ENST00000315491 TRPT1Q86TN4 253 aaKnown RBP11.9□□□□□ -0.51
TUBB3-201ENST00000315491 Q8N1Y9 231 aa11.9□□□□□ -0.51
TUBB3-201ENST00000315491 NTF3P20783 257 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 LEPP41159 167 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 MAJINQ3KP22 176 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 PET117Q6UWS5 81 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 FAM19A2Q8N3H0 131 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 ZFAND2AQ8N6M9 145 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 ZC2HC1AQ96GY0 325 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
TUBB3-201ENST00000315491 PRR27Q6MZM9 219 aa11.88□□□□□ -0.51
TUBB3-201ENST00000315491 ATOH7Q8N100 152 aa11.88□□□□□ -0.51
TUBB3-201ENST00000315491 J3KRW8 73 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 K7ERU9 68 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 M0R2Z0 102 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 HSBP1O75506 76 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 SPINK13Q1W4C9 94 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 BVES-AS1Q5T3Y7 98 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 PRR9Q5T870 116 aa11.87□□□□□ -0.51
TUBB3-201ENST00000315491 KLLNB2CW77 178 aa11.86□□□□□ -0.51
TUBB3-201ENST00000315491 CRIP1P50238 77 aa11.86□□□□□ -0.51
TUBB3-201ENST00000315491 ZNF80P51504 273 aaPredicted RBP11.86□□□□□ -0.51
TUBB3-201ENST00000315491 FXYD7P58549 80 aa11.86□□□□□ -0.51
TUBB3-201ENST00000315491 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
TUBB3-201ENST00000315491 RNASE7Q9H1E1 156 aaKnown RBP11.86□□□□□ -0.51
TUBB3-201ENST00000315491 CRXO43186 299 aaPredicted RBP11.85□□□□□ -0.51
TUBB3-201ENST00000315491 CIDEAO60543 219 aa11.85□□□□□ -0.51
TUBB3-201ENST00000315491 RPL35AP18077 110 aaKnown RBP11.85□□□□□ -0.51
TUBB3-201ENST00000315491 KIR3DS1Q14943 382 aa11.85□□□□□ -0.51
TUBB3-201ENST00000315491 IBA57Q5T440 356 aaKnown RBP11.85□□□□□ -0.51
TUBB3-201ENST00000315491 MRPL54Q6P161 138 aaKnown RBP11.85□□□□□ -0.51
TUBB3-201ENST00000315491 AGRNO00468 2067 aa11.85□□□□□ -0.51
TUBB3-201ENST00000315491 SPINK4O60575 86 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 RNASE4P34096 147 aaKnown RBP11.84□□□□□ -0.51
TUBB3-201ENST00000315491 FAM231DQ6ZW35 169 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 TMEM70Q9BUB7 260 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 TRAV12-2A0A075B6T6 113 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 C19orf71A6NCJ1 209 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 HSBP1L1C9JCN9 74 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 TMEM238C9JI98 176 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 SH2D1AO60880 128 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 SLAQ13239 276 aa11.84□□□□□ -0.51
TUBB3-201ENST00000315491 DAZAP1Q96EP5 407 aaKnown RBP11.84□□□□□ -0.51
TUBB3-201ENST00000315491 C7orf71A4D174 169 aa11.83□□□□□ -0.52
TUBB3-201ENST00000315491 FABP5P3A8MUU1 101 aa11.83□□□□□ -0.52
TUBB3-201ENST00000315491 TCL1AP56279 114 aa11.83□□□□□ -0.52
TUBB3-201ENST00000315491 MPV17L2Q567V2 206 aa11.83□□□□□ -0.52
TUBB3-201ENST00000315491 NUDT11Q96G61 164 aa11.83□□□□□ -0.52
TUBB3-201ENST00000315491 TRAV21A0A0B4J279 112 aa11.82□□□□□ -0.52
TUBB3-201ENST00000315491 KPRPQ5T749 579 aaPredicted RBP11.82□□□□□ -0.52
TUBB3-201ENST00000315491 Q6AWC8 147 aa11.82□□□□□ -0.52
TUBB3-201ENST00000315491 MORN3Q6PF18 240 aaPredicted RBP11.82□□□□□ -0.52
TUBB3-201ENST00000315491 SLC25A34Q6PIV7 304 aa11.82□□□□□ -0.52
TUBB3-201ENST00000315491 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
TUBB3-201ENST00000315491 TRAV12-3A0A0B4J271 114 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 P01737 135 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 IGHV4-30-4P0DP06 118 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 AMMECR1LQ6DCA0 310 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 Q6ZQT7 251 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 ATP5L2Q7Z4Y8 100 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 SPATA12Q7Z6I5 190 aa11.81□□□□□ -0.52
TUBB3-201ENST00000315491 NUDT3O95989 172 aa11.8□□□□□ -0.52
TUBB3-201ENST00000315491 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms