RNA–Protein interactions for RNA: ENST00000312438.7

CLCF1-201, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCF1, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-201ENST00000312438 RBMY1EA6NEQ0 496 aaKnown RBP12.33□□□□□ -0.44
CLCF1-201ENST00000312438 M0R381 172 aa12.33□□□□□ -0.44
CLCF1-201ENST00000312438 RBMY1DP0C7P1 496 aaKnown RBP12.33□□□□□ -0.44
CLCF1-201ENST00000312438 AMTP48728 403 aa12.33□□□□□ -0.44
CLCF1-201ENST00000312438 RNASEKQ6P5S7 137 aaKnown RBP12.33□□□□□ -0.44
CLCF1-201ENST00000312438 JOSD1Q15040 202 aaPredicted RBP12.32□□□□□ -0.44
CLCF1-201ENST00000312438 STHQ8IWL8 128 aa12.32□□□□□ -0.44
CLCF1-201ENST00000312438 URB1-AS1Q96HZ7 61 aa12.32□□□□□ -0.44
CLCF1-201ENST00000312438 CITED1Q99966 193 aa12.32□□□□□ -0.44
CLCF1-201ENST00000312438 FAM110AQ9BQ89 295 aa12.32□□□□□ -0.44
CLCF1-201ENST00000312438 BEAN1Q3B7T3 259 aa12.32□□□□□ -0.44
CLCF1-201ENST00000312438 SETD2Q9BYW2 2564 aaPredicted RBP12.31□□□□□ -0.44
CLCF1-201ENST00000312438 SETXQ7Z333 2677 aaKnown RBP12.31□□□□□ -0.44
CLCF1-201ENST00000312438 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
CLCF1-201ENST00000312438 PMCHP20382 165 aa12.31□□□□□ -0.44
CLCF1-201ENST00000312438 Q8N1Y9 231 aa12.31□□□□□ -0.44
CLCF1-201ENST00000312438 FAM19A2Q8N3H0 131 aa12.31□□□□□ -0.44
CLCF1-201ENST00000312438 LAMTOR2Q9Y2Q5 125 aa12.31□□□□□ -0.44
CLCF1-201ENST00000312438 SPRY2O43597 315 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 NXPH4O95158 308 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 PRSS3P2Q8NHM4 247 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 NIT2Q9NQR4 276 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 TRGV11A0A075B6L2 103 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 C9orf85Q96MD7 179 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 C20orf144Q9BQM9 153 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 MDFICQ9P1T7 246 aa12.3□□□□□ -0.44
CLCF1-201ENST00000312438 SMKR1H3BMG3 65 aa12.29□□□□□ -0.44
CLCF1-201ENST00000312438 RBMY1A1P0DJD3 496 aaKnown RBP12.29□□□□□ -0.44
CLCF1-201ENST00000312438 RBMY1CP0DJD4 496 aa12.29□□□□□ -0.44
CLCF1-201ENST00000312438 INSL3P51460 131 aa12.29□□□□□ -0.44
CLCF1-201ENST00000312438 RBMY1FQ15415 496 aaKnown RBP12.29□□□□□ -0.44
CLCF1-201ENST00000312438 Q6ZWC4 215 aa12.29□□□□□ -0.44
CLCF1-201ENST00000312438 C2CD3Q4AC94 2353 aa12.29□□□□□ -0.44
CLCF1-201ENST00000312438 CBY3A6NI87 242 aa12.28□□□□□ -0.44
CLCF1-201ENST00000312438 NUTF2P61970 127 aaKnown RBP12.28□□□□□ -0.44
CLCF1-201ENST00000312438 TRPT1Q86TN4 253 aaKnown RBP12.28□□□□□ -0.44
CLCF1-201ENST00000312438 DPH3P1Q9H4G8 78 aa12.28□□□□□ -0.44
CLCF1-201ENST00000312438 SORL1Q92673 2214 aa12.28□□□□□ -0.44
CLCF1-201ENST00000312438 NCR2O95944 276 aa12.27□□□□□ -0.44
CLCF1-201ENST00000312438 NPYP01303 97 aa12.27□□□□□ -0.44
CLCF1-201ENST00000312438 FA2HQ7L5A8 372 aa12.27□□□□□ -0.44
CLCF1-201ENST00000312438 AP1S3Q96PC3 154 aa12.27□□□□□ -0.44
CLCF1-201ENST00000312438 IFI27P40305 119 aaPredicted RBP12.27□□□□□ -0.45
CLCF1-201ENST00000312438 C14orf178Q8N769 122 aaPredicted RBP12.27□□□□□ -0.45
CLCF1-201ENST00000312438 MRAP2Q96G30 205 aa12.27□□□□□ -0.45
CLCF1-201ENST00000312438 LINC00467Q9BRT7 94 aa12.27□□□□□ -0.45
CLCF1-201ENST00000312438 AP5S1Q9NUS5 200 aa12.27□□□□□ -0.45
CLCF1-201ENST00000312438 C19orf73Q9NVV2 129 aa12.27□□□□□ -0.45
CLCF1-201ENST00000312438 WNK1Q9H4A3 2382 aa12.26□□□□□ -0.45
CLCF1-201ENST00000312438 LOC389332A0A1B0GUA5 103 aa12.26□□□□□ -0.45
CLCF1-201ENST00000312438 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
CLCF1-201ENST00000312438 INSP01308 110 aa12.26□□□□□ -0.45
CLCF1-201ENST00000312438 SYT8Q8NBV8 401 aa12.26□□□□□ -0.45
CLCF1-201ENST00000312438 GAS8-AS1O95177 125 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 LINC01587Q99440 93 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 MAP1LC3AQ9H492 121 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 F8P00451 2351 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 CYSRT1A8MQ03 144 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 SMIM17P0DL12 118 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 HTN1P15515 57 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 C9orf66Q5T8R8 295 aa12.25□□□□□ -0.45
CLCF1-201ENST00000312438 AGRNO00468 2067 aa12.24□□□□□ -0.45
CLCF1-201ENST00000312438 IGHV1-24A0A0C4DH33 117 aa12.24□□□□□ -0.45
CLCF1-201ENST00000312438 SCGB1D1O95968 90 aa12.24□□□□□ -0.45
CLCF1-201ENST00000312438 XCL2Q9UBD3 114 aa12.24□□□□□ -0.45
CLCF1-201ENST00000312438 TRAV26-2A0A0B4J265 109 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 PRSS47A8MTI9 375 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 GATA1P15976 413 aaPredicted RBP12.23□□□□□ -0.45
CLCF1-201ENST00000312438 PMCHL1Q16048 86 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 POM121L12Q8N7R1 296 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 KIF25-AS1Q9Y6Z4 181 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 KRTDAPP60985 99 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 CDPF1Q6NVV7 123 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 DEFB125Q8N687 156 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 NRACQ8N912 160 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 NXT2Q9NPJ8 142 aaKnown RBP12.23□□□□□ -0.45
CLCF1-201ENST00000312438 GSN-AS1Q9NRJ2 163 aa12.23□□□□□ -0.45
CLCF1-201ENST00000312438 LEPROTL1O95214 131 aa12.21□□□□□ -0.45
CLCF1-201ENST00000312438 MGPP08493 103 aa12.21□□□□□ -0.45
CLCF1-201ENST00000312438 LINC00315P59091 139 aa12.21□□□□□ -0.45
CLCF1-201ENST00000312438 ZNF876PQ49A33 203 aa12.21□□□□□ -0.45
CLCF1-201ENST00000312438 MCRIP2Q9BUT9 160 aaKnown RBP12.21□□□□□ -0.45
CLCF1-201ENST00000312438 JPT2Q9H910 190 aa12.21□□□□□ -0.45
CLCF1-201ENST00000312438 LINC01546A6NGU7 62 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 PPP1R17O96001 155 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 C3orf79P0CE67 100 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 S100A12P80511 92 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 ZNF415Q09FC8 603 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 C1orf158Q8N1D5 194 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 TMEM208Q9BTX3 173 aa12.21□□□□□ -0.46
CLCF1-201ENST00000312438 Q8N8P6 123 aa12.2□□□□□ -0.46
CLCF1-201ENST00000312438 WFDC9Q8NEX5 89 aa12.2□□□□□ -0.46
CLCF1-201ENST00000312438 WFDC10AQ9H1F0 79 aa12.2□□□□□ -0.46
CLCF1-201ENST00000312438 PRM2P04554 102 aa12.19□□□□□ -0.46
CLCF1-201ENST00000312438 KRTAP24-1Q3LI83 254 aa12.19□□□□□ -0.46
CLCF1-201ENST00000312438 PIK3CD-AS1Q5SR53 167 aa12.19□□□□□ -0.46
CLCF1-201ENST00000312438 MORN3Q6PF18 240 aaPredicted RBP12.19□□□□□ -0.46
CLCF1-201ENST00000312438 GTSCR1Q86UQ5 136 aa12.19□□□□□ -0.46
CLCF1-201ENST00000312438 SPATA3Q8NHX4 192 aa12.19□□□□□ -0.46
CLCF1-201ENST00000312438 PTH2Q96A98 100 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms