RNA–Protein interactions for RNA: ENST00000304004.7

POLR1C-201, Transcript of RNA polymerase I and III subunit C, humanhuman

TSL 1 (best) BASIC

Gene POLR1C, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1C-201ENST00000304004 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
POLR1C-201ENST00000304004 IGKV3D-20A0A0C4DH25 116 aa11.22□□□□□ -0.61
POLR1C-201ENST00000304004 TRGV4A0A0C4DH28 118 aa11.22□□□□□ -0.61
POLR1C-201ENST00000304004 PAX4O43316 350 aa11.22□□□□□ -0.61
POLR1C-201ENST00000304004 SH2D1AO60880 128 aa11.22□□□□□ -0.61
POLR1C-201ENST00000304004 RNASE3P12724 160 aaKnown RBP11.22□□□□□ -0.61
POLR1C-201ENST00000304004 C11orf52Q96A22 123 aa11.22□□□□□ -0.61
POLR1C-201ENST00000304004 ZNF479Q96JC4 524 aa11.22□□□□□ -0.61
POLR1C-201ENST00000304004 EPPK1P58107 5090 aaKnown RBP11.22□□□□□ -0.61
POLR1C-201ENST00000304004 IGLV2-18A0A075B6J9 118 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 B4DEV8 164 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 IFNA1P01562 189 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 ORM1P02763 201 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 ASIPP42127 132 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 CRIP1P50238 77 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 NKX2-5P52952 324 aaPredicted RBP11.21□□□□□ -0.61
POLR1C-201ENST00000304004 CRYBA4P53673 196 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 ZNF674Q2M3X9 581 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 ZNF876PQ49A33 203 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 NHLRC2Q8NBF2 726 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 TXNDC17Q9BRA2 123 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 LINC00588Q9Y4M8 146 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 ICOSQ9Y6W8 199 aa11.21□□□□□ -0.61
POLR1C-201ENST00000304004 A0A096LPF7 62 aa11.2□□□□□ -0.62
POLR1C-201ENST00000304004 M0R036 132 aa11.2□□□□□ -0.62
POLR1C-201ENST00000304004 MEF2BQ02080 365 aaPredicted RBP11.2□□□□□ -0.62
POLR1C-201ENST00000304004 ALKAL2Q6UX46 152 aa11.2□□□□□ -0.62
POLR1C-201ENST00000304004 OR4C5Q8NGB2 326 aa11.2□□□□□ -0.62
POLR1C-201ENST00000304004 PTH2Q96A98 100 aa11.2□□□□□ -0.62
POLR1C-201ENST00000304004 HHLA3Q9XRX5 114 aa11.2□□□□□ -0.62
POLR1C-201ENST00000304004 KRBOX1C9JBD0 128 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 C9JCJ5 164 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 M0R2N4 97 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 BCL2P10415 239 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 S100A4P26447 101 aaKnown RBP11.19□□□□□ -0.62
POLR1C-201ENST00000304004 RPL35P42766 123 aaKnown RBP11.19□□□□□ -0.62
POLR1C-201ENST00000304004 ZNF506Q5JVG8 444 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 DNLZQ5SXM8 178 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 Q6ZR54 194 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 ZNRF2Q8NHG8 242 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 DERL1Q9BUN8 251 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 IL36BQ9NZH7 164 aa11.19□□□□□ -0.62
POLR1C-201ENST00000304004 H3BVH4 76 aa11.18□□□□□ -0.62
POLR1C-201ENST00000304004 BAGE2Q86Y30 109 aa11.18□□□□□ -0.62
POLR1C-201ENST00000304004 MLST8Q9BVC4 326 aa11.18□□□□□ -0.62
POLR1C-201ENST00000304004 MRPS16Q9Y3D3 137 aaKnown RBP11.18□□□□□ -0.62
POLR1C-201ENST00000304004 PGPEP1LA6NFU8 196 aa11.17□□□□□ -0.62
POLR1C-201ENST00000304004 RS1O15537 224 aa11.17□□□□□ -0.62
POLR1C-201ENST00000304004 PDE6DO43924 150 aa11.17□□□□□ -0.62
POLR1C-201ENST00000304004 TAGLN2P37802 199 aaKnown RBP11.17□□□□□ -0.62
POLR1C-201ENST00000304004 ESRGQ1W209 222 aa11.17□□□□□ -0.62
POLR1C-201ENST00000304004 UPK3BQ9BT76 320 aa11.17□□□□□ -0.62
POLR1C-201ENST00000304004 GATA1P15976 413 aaPredicted RBP11.16□□□□□ -0.62
POLR1C-201ENST00000304004 MRPL23Q16540 153 aaKnown RBP11.16□□□□□ -0.62
POLR1C-201ENST00000304004 CENPWQ5EE01 88 aa11.16□□□□□ -0.62
POLR1C-201ENST00000304004 PIK3CD-AS1Q5SR53 167 aa11.16□□□□□ -0.62
POLR1C-201ENST00000304004 CFAP126Q5VTH2 177 aa11.16□□□□□ -0.62
POLR1C-201ENST00000304004 PCNPQ8WW12 178 aaKnown RBP11.16□□□□□ -0.62
POLR1C-201ENST00000304004 VAX2Q9UIW0 290 aa11.16□□□□□ -0.62
POLR1C-201ENST00000304004 TMSB15BA0A087X1C1 80 aa11.15□□□□□ -0.62
POLR1C-201ENST00000304004 GRIFINA4D1Z8 144 aa11.15□□□□□ -0.62
POLR1C-201ENST00000304004 CIDEAO60543 219 aa11.15□□□□□ -0.62
POLR1C-201ENST00000304004 GYPEP15421 78 aa11.15□□□□□ -0.62
POLR1C-201ENST00000304004 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
POLR1C-201ENST00000304004 NBDYA0A0U1RRE5 68 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 K7EQD1 137 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 ARMS2P0C7Q2 107 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 SRIP30626 198 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 SYT8Q8NBV8 401 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 HECTD4Q9Y4D8 3996 aa11.14□□□□□ -0.63
POLR1C-201ENST00000304004 A8MWV9 139 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 CXCL1P09341 107 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 LINC00336Q6ZUF6 198 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 NEGR1Q7Z3B1 354 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 ZNF575Q86XF7 245 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 SMIM12Q96EX1 92 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 PARLQ9H300 379 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 SCRT2Q9NQ03 307 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 BIRC6Q9NR09 4857 aa11.13□□□□□ -0.63
POLR1C-201ENST00000304004 DNAH2Q9P225 4427 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 MED14OSP0DP75 135 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 MALP21145 153 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 GNG4P50150 75 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 RPL19P84098 196 aaKnown RBP11.12□□□□□ -0.63
POLR1C-201ENST00000304004 RHOHQ15669 191 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 TTC32Q5I0X7 151 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 LYPD6BQ8NI32 183 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 Q9H8V8 135 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 MED9Q9NWA0 146 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 PHLDA3Q9Y5J5 127 aa11.12□□□□□ -0.63
POLR1C-201ENST00000304004 IGHV3-73A0A0B4J1V6 119 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 LOC100131303A0A0U1RQF7 123 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 TRBV6-4A0A1B0GX49 114 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 RTL8CO15255 209 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 MGST1P10620 155 aaKnown RBP11.11□□□□□ -0.63
POLR1C-201ENST00000304004 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 ZFP2Q6ZN57 461 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 ZFP82Q8N141 532 aa11.11□□□□□ -0.63
POLR1C-201ENST00000304004 SLC25A29Q8N8R3 303 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 176.8 ms