RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 F8W1H4 67 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 H3BMM0 161 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 FGF6P10767 208 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 GAGE2AQ6NT46 116 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 C9orf47Q6ZRZ4 202 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 C22orf34Q6ZV56 151 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 UBE2WQ96B02 151 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 PTPRSQ13332 1948 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.64□□□□□ -0.39
BRD3-201ENST00000303407 IGKV2-29A2NJV5 120 aaPredicted RBP12.64□□□□□ -0.39
BRD3-201ENST00000303407 SCRT2Q9NQ03 307 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 PRO1854Q9UHT4 67 aa12.64□□□□□ -0.39
BRD3-201ENST00000303407 USF3Q68DE3 2245 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 TRBV6-1A0A0K0K1D8 114 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 EML6Q6ZMW3 1958 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 K7EP13 123 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 LINC01545Q5VT33 79 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 HIST1H4AP62805 103 aaKnown RBP12.63□□□□□ -0.39
BRD3-201ENST00000303407 IGHV4OR15-8A0A075B7B6 117 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 A0A087WW49 117 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 C12orf74Q32Q52 190 aa12.63□□□□□ -0.39
BRD3-201ENST00000303407 A0A096LPF7 62 aa12.62□□□□□ -0.39
BRD3-201ENST00000303407 C10orf142B7Z368 130 aa12.62□□□□□ -0.39
BRD3-201ENST00000303407 FANCD2OSQ96PS1 177 aa12.62□□□□□ -0.39
BRD3-201ENST00000303407 Q6ZVH6 145 aa12.62□□□□□ -0.39
BRD3-201ENST00000303407 ZNF48Q96MX3 618 aaPredicted RBP12.62□□□□□ -0.39
BRD3-201ENST00000303407 GTF3C1Q12789 2109 aa12.62□□□□□ -0.39
BRD3-201ENST00000303407 DOCK10Q96BY6 2186 aa12.61□□□□□ -0.39
BRD3-201ENST00000303407 C19orf71A6NCJ1 209 aa12.61□□□□□ -0.39
BRD3-201ENST00000303407 ODF3BA8MYP8 253 aa12.61□□□□□ -0.39
BRD3-201ENST00000303407 INTS1Q8N201 2190 aaKnown RBP12.61□□□□□ -0.39
BRD3-201ENST00000303407 DNAJC30Q96LL9 226 aa12.6□□□□□ -0.39
BRD3-201ENST00000303407 PSCAO43653 123 aa12.6□□□□□ -0.39
BRD3-201ENST00000303407 CTRLP40313 264 aa12.6□□□□□ -0.39
BRD3-201ENST00000303407 H3BMG7 143 aa12.59□□□□□ -0.39
BRD3-201ENST00000303407 ZNF561-AS1K7EIQ3 104 aa12.59□□□□□ -0.39
BRD3-201ENST00000303407 ANKRD39Q53RE8 183 aa12.59□□□□□ -0.39
BRD3-201ENST00000303407 ZFP2Q6ZN57 461 aa12.59□□□□□ -0.39
BRD3-201ENST00000303407 TRBV12-3P01733 135 aa12.59□□□□□ -0.39
BRD3-201ENST00000303407 ETDBQ3ZM63 59 aa12.58□□□□□ -0.39
BRD3-201ENST00000303407 PPDPFLQ8WWR9 84 aa12.58□□□□□ -0.39
BRD3-201ENST00000303407 CEP192Q8TEP8 1941 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 TECTAO75443 2155 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 IGHG2P01859 326 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 CLPSL2Q6UWE3 100 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 IGLV2-8P01709 118 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 DEFB1P60022 68 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 BOD1L2Q8IYS8 172 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 NXPH4O95158 308 aa12.58□□□□□ -0.4
BRD3-201ENST00000303407 K7EMT4 169 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 SHANK1Q9Y566 2161 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 DEFB125Q8N687 156 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 C2orf70A6NJV1 201 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 UNQ9165/PRO28630Q6UXU0 137 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 PCNX3Q9H6A9 2034 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 Q8N1Y9 231 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 RNF152Q8N8N0 203 aa12.57□□□□□ -0.4
BRD3-201ENST00000303407 SRCAPQ6ZRS2 3230 aa12.56□□□□□ -0.4
BRD3-201ENST00000303407 AMTNQ6UX39 209 aa12.56□□□□□ -0.4
BRD3-201ENST00000303407 RIF1Q5UIP0 2472 aaKnown RBP12.56□□□□□ -0.4
BRD3-201ENST00000303407 A6NDX4 124 aa12.56□□□□□ -0.4
BRD3-201ENST00000303407 CCDC140Q96MF4 163 aa12.56□□□□□ -0.4
BRD3-201ENST00000303407 SPANXA1Q9NS26 97 aa12.56□□□□□ -0.4
BRD3-201ENST00000303407 MALRD1Q5VYJ5 2156 aa12.56□□□□□ -0.4
BRD3-201ENST00000303407 GPHB5Q86YW7 130 aa12.55□□□□□ -0.4
BRD3-201ENST00000303407 DYSFO75923 2080 aa12.55□□□□□ -0.4
BRD3-201ENST00000303407 CADP27708 2225 aa12.55□□□□□ -0.4
BRD3-201ENST00000303407 PCNX2A6NKB5 2137 aa12.55□□□□□ -0.4
BRD3-201ENST00000303407 K7EQD1 137 aa12.55□□□□□ -0.4
BRD3-201ENST00000303407 ANGP03950 147 aaKnown RBP12.55□□□□□ -0.4
BRD3-201ENST00000303407 MED13Q9UHV7 2174 aa12.54□□□□□ -0.4
BRD3-201ENST00000303407 LINC00322Q6ZN03 302 aaPredicted RBP12.54□□□□□ -0.4
BRD3-201ENST00000303407 TOMM6Q96B49 74 aa12.54□□□□□ -0.4
BRD3-201ENST00000303407 CITED2Q99967 270 aaPredicted RBP12.54□□□□□ -0.4
BRD3-201ENST00000303407 A0A0J9YY99 117 aa12.54□□□□□ -0.4
BRD3-201ENST00000303407 C16orf74Q96GX8 76 aa12.54□□□□□ -0.4
BRD3-201ENST00000303407 TRAV13-2A0A0B4J235 113 aa12.54□□□□□ -0.4
BRD3-201ENST00000303407 MED14OSP0DP75 135 aa12.54□□□□□ -0.4
BRD3-201ENST00000303407 LRP4O75096 1905 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 CRYGBP07316 175 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 LINC01548A6NM66 108 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 C19orf84I3L1E1 186 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 CARD19Q96LW7 228 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 Q9H8V8 135 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 A0A1B0GXF2 115 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 BAALCQ8WXS3 180 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 TMEM89A2RUT3 159 aa12.53□□□□□ -0.4
BRD3-201ENST00000303407 RPL39P62891 51 aaKnown RBP12.53□□□□□ -0.4
BRD3-201ENST00000303407 ZGRF1Q86YA3 2104 aa12.52□□□□□ -0.4
BRD3-201ENST00000303407 LMO4P61968 165 aa12.52□□□□□ -0.4
BRD3-201ENST00000303407 TRAV12-1A0A0B4J245 112 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 XCL1P47992 114 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 C4orf3Q8WVX3 66 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 SOCS3O14543 225 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 INAFM2P0DMQ5 153 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 PRORYQ9H606 182 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 NCOA6Q14686 2063 aaPredicted RBP12.52□□□□□ -0.41
BRD3-201ENST00000303407 AKAP6Q13023 2319 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 CCL25O15444 150 aa12.52□□□□□ -0.41
BRD3-201ENST00000303407 ZNF80P51504 273 aaPredicted RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms