RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 MED13LQ71F56 2210 aa12.87□□□□□ -0.35
SNAPC4-201ENST00000298532 LHBP01229 141 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 NXPH4O95158 308 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 DAZAP2Q15038 168 aaPredicted RBP12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 K7EIM0 57 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 SPATA12Q7Z6I5 190 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 RPL39LQ96EH5 51 aaKnown RBP12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 DSCR8Q96T75 97 aa12.86□□□□□ -0.35
SNAPC4-201ENST00000298532 IGKV1OR2-108A0A075B7D4 117 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 DEFB113Q30KQ7 82 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 ATP6V0E2Q8NHE4 81 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 Q9H8V8 135 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 CTSZQ9UBR2 303 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 TCTEX1D4Q5JR98 221 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 MUSTN1Q8IVN3 82 aa12.85□□□□□ -0.35
SNAPC4-201ENST00000298532 C2orf16Q68DN1 1984 aa12.84□□□□□ -0.35
SNAPC4-201ENST00000298532 F6UB75 175 aa12.84□□□□□ -0.35
SNAPC4-201ENST00000298532 ODF1Q14990 250 aa12.84□□□□□ -0.35
SNAPC4-201ENST00000298532 E9PLD3 99 aa12.83□□□□□ -0.35
SNAPC4-201ENST00000298532 LINC01619G3V211 115 aa12.83□□□□□ -0.35
SNAPC4-201ENST00000298532 GTF3C1Q12789 2109 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 RS1O15537 224 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 ZFP2Q6ZN57 461 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 ICOSQ9Y6W8 199 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 PLCE1Q9P212 2302 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 CTRLP40313 264 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 TRBV6-1A0A0K0K1D8 114 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 MED13Q9UHV7 2174 aa12.83□□□□□ -0.36
SNAPC4-201ENST00000298532 C19orf71A6NCJ1 209 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 H3BUA1 57 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 HERV-K104P63124 156 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 CFHR3Q02985 330 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 YPEL4Q96NS1 127 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 TRAV26-1A0A087WT03 109 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 COL4A4P53420 1690 aaPredicted RBP12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 DENND4CQ5VZ89 1909 aa12.82□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A1B0GXF2 115 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 SUMO4Q6EEV6 95 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A0J9YXV3 536 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 ORMDL1Q9P0S3 153 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 ATOX1O00244 68 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 CDK2AP2O75956 126 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 ODF3L1Q8IXM7 274 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 IGLV11-55A0A075B6I3 123 aa12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 RBM3P98179 157 aaKnown RBP12.81□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A0B4J2C4 111 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 ZNF561-AS1K7EIQ3 104 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 SPRY2O43597 315 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 TMEM258P61165 79 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 PRB1P04280 392 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 PLXNB3Q9ULL4 1909 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 FAM236AA0A1B0GUQ0 79 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 FAM236BA0A1B0GV22 79 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 P0C879 139 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 SLC25A29Q8N8R3 303 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 FBXL19-AS1Q494R0 122 aa12.8□□□□□ -0.36
SNAPC4-201ENST00000298532 MRAPQ8TCY5 172 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 TOMM6Q96B49 74 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 IGKV2-29A2NJV5 120 aaPredicted RBP12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 CTSGP08311 255 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 SPRNQ5BIV9 151 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 NPBQ8NG41 125 aa12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 A0A1W2PNU3 283 aaPredicted RBP12.79□□□□□ -0.36
SNAPC4-201ENST00000298532 BAALCQ8WXS3 180 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 TNRC6AQ8NDV7 1962 aaKnown RBP12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 TRBV10-2A0A0K0K1G8 114 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 BUB3O43684 328 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 H0YGX0 51 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 H3BT86 120 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 IGFBPL1Q8WX77 278 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 ZNF503Q96F45 646 aa12.78□□□□□ -0.36
SNAPC4-201ENST00000298532 TRAV25A0A0B4J276 109 aa12.77□□□□□ -0.36
SNAPC4-201ENST00000298532 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 RITA1Q96K30 269 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 TIMM17AQ99595 171 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 J3KT08 172 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 PIFOQ8TCI5 191 aa12.77□□□□□ -0.37
SNAPC4-201ENST00000298532 ADORA2A-AS1P86434 159 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 ARHGAP21Q5T5U3 1957 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 MRPL36Q9P0J6 103 aaKnown RBP12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 CITED2Q99967 270 aaPredicted RBP12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 COL4A3Q01955 1670 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 KIF26AQ9ULI4 1882 aaPredicted RBP12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 CRYGCP07315 174 aa12.76□□□□□ -0.37
SNAPC4-201ENST00000298532 IGHV7-81A0A0B4J1V7 117 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 A0A1B0GX51 115 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 ELANEP08246 267 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 ZNF295-AS1Q8N0V1 137 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 C11orf86A6NJI1 115 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 IGLV2-23P01705 113 aa12.75□□□□□ -0.37
SNAPC4-201ENST00000298532 NKAPP1Q8N9T2 125 aa12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 HOXB4P17483 251 aaPredicted RBP12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 PRAC2D3DTV9 90 aa12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 BDP1A6H8Y1 2624 aa12.74□□□□□ -0.37
SNAPC4-201ENST00000298532 TEX22C9J3V5 150 aa12.73□□□□□ -0.37
SNAPC4-201ENST00000298532 RPL39P62891 51 aaKnown RBP12.73□□□□□ -0.37
SNAPC4-201ENST00000298532 GDF5OSQ5U4N7 250 aa12.73□□□□□ -0.37
SNAPC4-201ENST00000298532 C9orf47Q6ZRZ4 202 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms