RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 KLHL30-AS1Q8NEE0 82 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 OR1N2Q8NGR9 330 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 C16orf92Q96LL3 132 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 TSSC4Q9Y5U2 329 aaPredicted RBP12.67□□□□□ -0.38
CPSF4-201ENST00000292476 NPYP01303 97 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 SYNJ2BPP57105 145 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 RPL11P62913 178 aaKnown RBP12.67□□□□□ -0.38
CPSF4-201ENST00000292476 RNF182Q8N6D2 247 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 OR11H1Q8NG94 326 aa12.67□□□□□ -0.38
CPSF4-201ENST00000292476 NXT2Q9NPJ8 142 aaKnown RBP12.67□□□□□ -0.38
CPSF4-201ENST00000292476 COX8AP10176 69 aa12.66□□□□□ -0.38
CPSF4-201ENST00000292476 SPATA3Q8NHX4 192 aa12.66□□□□□ -0.38
CPSF4-201ENST00000292476 COX11Q9Y6N1 276 aa12.66□□□□□ -0.38
CPSF4-201ENST00000292476 IGHV4-4A0A075B6R2 117 aa12.65□□□□□ -0.38
CPSF4-201ENST00000292476 LOC389332A0A1B0GUA5 103 aa12.65□□□□□ -0.38
CPSF4-201ENST00000292476 DEFB125Q8N687 156 aa12.65□□□□□ -0.38
CPSF4-201ENST00000292476 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
CPSF4-201ENST00000292476 NPSP0C0P6 89 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 ID1P41134 155 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 CACNG7P62955 275 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 IGKV3D-20A0A0C4DH25 116 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 SNAI2O43623 268 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 SMIM15Q7Z3B0 74 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 IFI27L1Q96BM0 104 aa12.64□□□□□ -0.39
CPSF4-201ENST00000292476 H0Y8G0 127 aa12.63□□□□□ -0.39
CPSF4-201ENST00000292476 NCR2O95944 276 aa12.63□□□□□ -0.39
CPSF4-201ENST00000292476 OR8A1Q8NGG7 326 aa12.63□□□□□ -0.39
CPSF4-201ENST00000292476 LINC00477Q96M19 166 aa12.63□□□□□ -0.39
CPSF4-201ENST00000292476 MUC21A0A0G2JKD1 596 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 MUC21A0A140T8X8 626 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 OVOL1O14753 267 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 CD28P10747 220 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 PROK1P58294 105 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 MUC21Q5SSG8 566 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 BVES-AS1Q5T3Y7 98 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 OR9G4Q8NGQ1 327 aa12.62□□□□□ -0.39
CPSF4-201ENST00000292476 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
CPSF4-201ENST00000292476 STAB1Q9NY15 2570 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 TRBV7-9A0A0J9YWB2 115 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 FCER1GP30273 86 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 MSRB1Q9NZV6 116 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 C11orf21Q9P2W6 132 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 SMKR1H3BMG3 65 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 SOCS3O14543 225 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 SLURP1P55000 103 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 DEFB136Q30KP8 78 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 MPV17L2Q567V2 206 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 C18orf65Q6ZTR6 163 aa12.61□□□□□ -0.39
CPSF4-201ENST00000292476 Q8N8P6 123 aa12.6□□□□□ -0.39
CPSF4-201ENST00000292476 CITED2Q99967 270 aaPredicted RBP12.6□□□□□ -0.39
CPSF4-201ENST00000292476 MCRIP2Q9BUT9 160 aaKnown RBP12.6□□□□□ -0.39
CPSF4-201ENST00000292476 CCL24O00175 119 aa12.59□□□□□ -0.39
CPSF4-201ENST00000292476 NUDT3O95989 172 aa12.59□□□□□ -0.39
CPSF4-201ENST00000292476 SNRPD3P62318 126 aaKnown RBP12.59□□□□□ -0.39
CPSF4-201ENST00000292476 FHL3Q13643 280 aa12.59□□□□□ -0.39
CPSF4-201ENST00000292476 SIVA1O15304 175 aa12.58□□□□□ -0.4
CPSF4-201ENST00000292476 MED14OSP0DP75 135 aa12.58□□□□□ -0.4
CPSF4-201ENST00000292476 OR10J6PQ8NGY7 276 aa12.58□□□□□ -0.4
CPSF4-201ENST00000292476 MRAP2Q96G30 205 aa12.58□□□□□ -0.4
CPSF4-201ENST00000292476 TRAV2A0A0B4J234 112 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 FGF6P10767 208 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 UBE2V1Q13404 147 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 C2orf91Q6ZV80 131 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 OR2K2Q8NGT1 345 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 DCANP1Q8TF63 244 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 DLX4Q92988 240 aaPredicted RBP12.57□□□□□ -0.4
CPSF4-201ENST00000292476 RAX2Q96IS3 184 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 IGLV2-18A0A075B6J9 118 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 TRAV21A0A0B4J279 112 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 APRG1Q8IVJ8 170 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 BOD1L2Q8IYS8 172 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 C11orf44Q8N8P7 122 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 C20orf173Q96LM9 149 aa12.57□□□□□ -0.4
CPSF4-201ENST00000292476 TENM1Q9UKZ4 2725 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 IGKV3-7A0A075B6H7 116 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 A0A1W2PRX2 142 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 ATP5LO75964 103 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 LEPP41159 167 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 SEC11AP67812 179 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 NDUFA11Q86Y39 141 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 DYNLRB2Q8TF09 96 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 FAM19A4Q96LR4 140 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 ZMAT4Q9H898 229 aa12.56□□□□□ -0.4
CPSF4-201ENST00000292476 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
CPSF4-201ENST00000292476 ZFAND2AQ8N6M9 145 aa12.55□□□□□ -0.4
CPSF4-201ENST00000292476 C3orf56Q8N813 242 aa12.55□□□□□ -0.4
CPSF4-201ENST00000292476 NRACQ8N912 160 aa12.55□□□□□ -0.4
CPSF4-201ENST00000292476 TAX1BP3O14907 124 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 PTTG1IPP53801 180 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 KIR3DS1Q14943 382 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 SPANXN1Q5VSR9 72 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 DUX3Q96PT4 197 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 TP73-AS1Q9UF72 201 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 TRAV25A0A0B4J276 109 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 K7EQG2 157 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 EDN2P20800 178 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 EVI2AP22794 236 aa12.54□□□□□ -0.4
CPSF4-201ENST00000292476 K7EMI3 77 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms