RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ARMS2P0C7Q2 107 aa18.82■□□□□ 0.6
SSU72-201ENST00000291386 SLAQ13239 276 aa18.82■□□□□ 0.6
SSU72-201ENST00000291386 FHL2Q14192 279 aa18.82■□□□□ 0.6
SSU72-201ENST00000291386 TRAV26-1A0A087WT03 109 aa18.81■□□□□ 0.6
SSU72-201ENST00000291386 TMSB15BA0A087X1C1 80 aa18.81■□□□□ 0.6
SSU72-201ENST00000291386 H3BVH4 76 aa18.81■□□□□ 0.6
SSU72-201ENST00000291386 LY6G6CO95867 125 aa18.81■□□□□ 0.6
SSU72-201ENST00000291386 MED14OSP0DP75 135 aa18.81■□□□□ 0.6
SSU72-201ENST00000291386 ZNF479Q96JC4 524 aa18.81■□□□□ 0.6
SSU72-201ENST00000291386 CIDEAO60543 219 aa18.8■□□□□ 0.6
SSU72-201ENST00000291386 IGHV3-53P01767 116 aa18.8■□□□□ 0.6
SSU72-201ENST00000291386 RPL19P84098 196 aaKnown RBP18.8■□□□□ 0.6
SSU72-201ENST00000291386 OR4C5Q8NGB2 326 aa18.8■□□□□ 0.6
SSU72-201ENST00000291386 DAZAP1Q96EP5 407 aaKnown RBP18.8■□□□□ 0.6
SSU72-201ENST00000291386 SMDT1Q9H4I9 107 aa18.8■□□□□ 0.6
SSU72-201ENST00000291386 RYR2Q92736 4967 aa18.8■□□□□ 0.6
SSU72-201ENST00000291386 NACAE9PAV3 2078 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 RS1O15537 224 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 P0DMU3 169 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 FAM231AP0DMU4 169 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 FAM231CP0DMU5 169 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 OCC1Q8TAD7 63 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 PRO0255Q9UI72 69 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 LY96Q9Y6Y9 160 aa18.79■□□□□ 0.6
SSU72-201ENST00000291386 SFTA3P0C7M3 94 aa18.78■□□□□ 0.6
SSU72-201ENST00000291386 VSIG2Q96IQ7 327 aa18.78■□□□□ 0.6
SSU72-201ENST00000291386 VPS13DQ5THJ4 4388 aa18.78■□□□□ 0.6
SSU72-201ENST00000291386 A0A0J9YY99 117 aa18.77■□□□□ 0.6
SSU72-201ENST00000291386 RAB14P61106 215 aa18.77■□□□□ 0.6
SSU72-201ENST00000291386 PEA15Q15121 130 aa18.77■□□□□ 0.6
SSU72-201ENST00000291386 CFAP126Q5VTH2 177 aa18.77■□□□□ 0.6
SSU72-201ENST00000291386 SSBP4Q9BWG4 385 aaPredicted RBP18.77■□□□□ 0.6
SSU72-201ENST00000291386 HHLA3Q9XRX5 114 aa18.77■□□□□ 0.6
SSU72-201ENST00000291386 RYR3Q15413 4870 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 TRGV4A0A0C4DH28 118 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 K7EN84 100 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 SNAI2O43623 268 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 CEBPGP53567 150 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 CRYBA4P53673 196 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 RPS20P60866 119 aaKnown RBP18.76■□□□□ 0.59
SSU72-201ENST00000291386 SYT8Q8NBV8 401 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 PHLDA3Q9Y5J5 127 aa18.76■□□□□ 0.59
SSU72-201ENST00000291386 A8MWV9 139 aa18.75■□□□□ 0.59
SSU72-201ENST00000291386 NUDT3O95989 172 aa18.75■□□□□ 0.59
SSU72-201ENST00000291386 P01737 135 aa18.75■□□□□ 0.59
SSU72-201ENST00000291386 IFITM2Q01629 132 aa18.75■□□□□ 0.59
SSU72-201ENST00000291386 DMRTA1Q5VZB9 504 aa18.75■□□□□ 0.59
SSU72-201ENST00000291386 SMIM7Q9BQ49 75 aa18.75■□□□□ 0.59
SSU72-201ENST00000291386 OR5AL1P0C617 328 aa18.74■□□□□ 0.59
SSU72-201ENST00000291386 NUDT10Q8NFP7 164 aa18.74■□□□□ 0.59
SSU72-201ENST00000291386 NUDT11Q96G61 164 aa18.74■□□□□ 0.59
SSU72-201ENST00000291386 HYDINQ4G0P3 5121 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 ZNF727A8MUV8 499 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 C9JQL5 133 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 PAX4O43316 350 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 SRSF3P84103 164 aaKnown RBP18.73■□□□□ 0.59
SSU72-201ENST00000291386 RNF212Q495C1 297 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 ZFP82Q8N141 532 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 OR2D3Q8NGH3 330 aa18.73■□□□□ 0.59
SSU72-201ENST00000291386 FAM74A3Q4VXF1 159 aa18.72■□□□□ 0.59
SSU72-201ENST00000291386 CLLU1Q5K131 121 aa18.72■□□□□ 0.59
SSU72-201ENST00000291386 ZFP2Q6ZN57 461 aa18.72■□□□□ 0.59
SSU72-201ENST00000291386 XKRY2A2RUG3 117 aa18.71■□□□□ 0.59
SSU72-201ENST00000291386 NXPH4O95158 308 aa18.71■□□□□ 0.59
SSU72-201ENST00000291386 GATA1P15976 413 aaPredicted RBP18.71■□□□□ 0.59
SSU72-201ENST00000291386 FAM231DQ6ZW35 169 aa18.71■□□□□ 0.59
SSU72-201ENST00000291386 IGLC6P0CF74 106 aa18.7■□□□□ 0.58
SSU72-201ENST00000291386 SFRP2Q96HF1 295 aa18.7■□□□□ 0.58
SSU72-201ENST00000291386 A0A096LPF7 62 aa18.69■□□□□ 0.58
SSU72-201ENST00000291386 UFSP1Q6NVU6 142 aa18.69■□□□□ 0.58
SSU72-201ENST00000291386 LINC01551Q86U37 167 aa18.69■□□□□ 0.58
SSU72-201ENST00000291386 RNASE7Q9H1E1 156 aaKnown RBP18.69■□□□□ 0.58
SSU72-201ENST00000291386 M0R381 172 aa18.68■□□□□ 0.58
SSU72-201ENST00000291386 OR10AG1Q8NH19 301 aa18.68■□□□□ 0.58
SSU72-201ENST00000291386 RPP21Q9H633 154 aaKnown RBP18.68■□□□□ 0.58
SSU72-201ENST00000291386 ICOSQ9Y6W8 199 aa18.68■□□□□ 0.58
SSU72-201ENST00000291386 TRBV6-4A0A1B0GX49 114 aa18.67■□□□□ 0.58
SSU72-201ENST00000291386 FAM3BP58499 235 aaPredicted RBP18.67■□□□□ 0.58
SSU72-201ENST00000291386 JPT2Q9H910 190 aa18.67■□□□□ 0.58
SSU72-201ENST00000291386 RHODO00212 210 aa18.66■□□□□ 0.58
SSU72-201ENST00000291386 GZMBP10144 247 aa18.66■□□□□ 0.58
SSU72-201ENST00000291386 UBE2DNLQ8IWF7 75 aa18.66■□□□□ 0.58
SSU72-201ENST00000291386 FER1L6-AS1Q8NA97 138 aa18.66■□□□□ 0.58
SSU72-201ENST00000291386 CCL18P55774 89 aa18.65■□□□□ 0.58
SSU72-201ENST00000291386 MRPL23Q16540 153 aaKnown RBP18.65■□□□□ 0.58
SSU72-201ENST00000291386 TMEM241Q24JQ0 296 aa18.65■□□□□ 0.58
SSU72-201ENST00000291386 SAMD10Q9BYL1 202 aa18.65■□□□□ 0.58
SSU72-201ENST00000291386 DNAH6Q9C0G6 4158 aa18.65■□□□□ 0.58
SSU72-201ENST00000291386 IGHV3-73A0A0B4J1V6 119 aa18.64■□□□□ 0.57
SSU72-201ENST00000291386 A0A1W2PPQ1 181 aa18.64■□□□□ 0.57
SSU72-201ENST00000291386 CRYGDP07320 174 aa18.64■□□□□ 0.57
SSU72-201ENST00000291386 SLC25A29Q8N8R3 303 aa18.64■□□□□ 0.57
SSU72-201ENST00000291386 KMT2AQ03164 3969 aa18.64■□□□□ 0.57
SSU72-201ENST00000291386 F2Z2F3 143 aa18.63■□□□□ 0.57
SSU72-201ENST00000291386 K7EQD1 137 aa18.63■□□□□ 0.57
SSU72-201ENST00000291386 SPANXN1Q5VSR9 72 aa18.63■□□□□ 0.57
SSU72-201ENST00000291386 NAT8Q9UHE5 227 aa18.63■□□□□ 0.57
SSU72-201ENST00000291386 GATCO43716 136 aaKnown RBP18.62■□□□□ 0.57
SSU72-201ENST00000291386 GYPEP15421 78 aa18.62■□□□□ 0.57
SSU72-201ENST00000291386 ERVFC1-1P60608 527 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms