RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZNF815PA8K554 130 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 SNRPD3P62318 126 aaKnown RBP12.19□□□□□ -0.46
SMAD6-201ENST00000288840 C11orf71Q6IPW1 123 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 AMTNQ6UX39 209 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 Q8N8P6 123 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 SUMO2P61956 95 aaKnown RBP12.19□□□□□ -0.46
SMAD6-201ENST00000288840 Q6ZS46 218 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 ZNF418Q8TF45 676 aaPredicted RBP12.19□□□□□ -0.46
SMAD6-201ENST00000288840 A0A1W2PRX2 142 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 KNCNA6PVL3 124 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 ITLN2Q8WWU7 325 aaPredicted RBP12.19□□□□□ -0.46
SMAD6-201ENST00000288840 DPH3P1Q9H4G8 78 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 MRPL16Q9NX20 251 aaKnown RBP12.19□□□□□ -0.46
SMAD6-201ENST00000288840 ANKRD17O75179 2603 aaKnown RBP12.19□□□□□ -0.46
SMAD6-201ENST00000288840 SVEP1Q4LDE5 3571 aa12.19□□□□□ -0.46
SMAD6-201ENST00000288840 IGKV2D-26A0A0A0MRZ7 120 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 OVOL1O14753 267 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 PSMB2P49721 201 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 C2orf66Q6UXQ4 117 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 DUX3Q96PT4 197 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 FXYD2P54710 66 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 RBX1P62877 108 aa12.18□□□□□ -0.46
SMAD6-201ENST00000288840 BEX4Q9NWD9 120 aaPredicted RBP12.18□□□□□ -0.46
SMAD6-201ENST00000288840 IGHV4-59P01825 116 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 MSMBP08118 114 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 CDKN1BP46527 198 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 HERVK_113P61574 105 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 DAZ1Q9NQZ3 744 aaKnown RBP12.17□□□□□ -0.46
SMAD6-201ENST00000288840 AGRNO00468 2067 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 ZFAND3Q9H8U3 227 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 ZNF493Q6ZR52 646 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 BOD1L2Q8IYS8 172 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 ZNF479Q96JC4 524 aa12.17□□□□□ -0.46
SMAD6-201ENST00000288840 A0A1B0GV72 72 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 CRXO43186 299 aaPredicted RBP12.16□□□□□ -0.46
SMAD6-201ENST00000288840 PRB1P04280 392 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 AJUBAQ96IF1 538 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 ORMDL2Q53FV1 153 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 C10orf99Q6UWK7 81 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 C20orf173Q96LM9 149 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 FAM223BA6NKX1 122 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 FAM223AQ8IWN6 122 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 SMIM2Q9BVW6 85 aa12.16□□□□□ -0.46
SMAD6-201ENST00000288840 DGAT2L7PQ6IED9 249 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 TRBV25-1A0A075B6N4 114 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 C9orf118A6NHY6 69 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 DOPEY1Q5JWR5 2465 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 DEFB136Q30KP8 78 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 LINC01559Q495D7 138 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 PRR9Q5T870 116 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 RNF185Q96GF1 192 aa12.15□□□□□ -0.46
SMAD6-201ENST00000288840 A0A096LNJ9 63 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 J3QR89 54 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 EDN2P20800 178 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 SMAGPQ0VAQ4 97 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 ODF1Q14990 250 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 TP53TG1Q9Y2A0 90 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 H7C1H1 209 aa12.14□□□□□ -0.47
SMAD6-201ENST00000288840 TRBV6-1A0A0K0K1D8 114 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 A0A1B0GWB2 263 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 B4DSR2 109 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 SLC25A16P16260 332 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 C2orf91Q6ZV80 131 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 Q8N6K4 173 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 KLHL30-AS1Q8NEE0 82 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 TRAV8-2A0A0B4J237 113 aa12.13□□□□□ -0.47
SMAD6-201ENST00000288840 H3BRM9 83 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 COX6B1P14854 86 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 SYT8Q8NBV8 401 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 NDUFA4O00483 81 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 IGHG4P01861 327 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 LGALS3P17931 250 aaKnown RBP12.12□□□□□ -0.47
SMAD6-201ENST00000288840 CLPSL1A2RUU4 121 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 DEFB112Q30KQ8 113 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 USMG5Q96IX5 58 aa12.12□□□□□ -0.47
SMAD6-201ENST00000288840 A0A0U1RRA0 63 aa12.11□□□□□ -0.47
SMAD6-201ENST00000288840 NPC2P61916 151 aa12.11□□□□□ -0.47
SMAD6-201ENST00000288840 RPL39P62891 51 aaKnown RBP12.11□□□□□ -0.47
SMAD6-201ENST00000288840 ZNF876PQ49A33 203 aa12.11□□□□□ -0.47
SMAD6-201ENST00000288840 SAMD13Q5VXD3 122 aa12.11□□□□□ -0.47
SMAD6-201ENST00000288840 H3BMG7 143 aa12.11□□□□□ -0.47
SMAD6-201ENST00000288840 PAX2Q02962 417 aa12.11□□□□□ -0.47
SMAD6-201ENST00000288840 RNASE13Q5GAN3 156 aaKnown RBP12.11□□□□□ -0.47
SMAD6-201ENST00000288840 SPENQ96T58 3664 aaKnown RBP12.11□□□□□ -0.47
SMAD6-201ENST00000288840 ZNF48Q96MX3 618 aaPredicted RBP12.11□□□□□ -0.47
SMAD6-201ENST00000288840 EBI3Q14213 229 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 PRADC1Q9BSG0 188 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 GTSF1LQ9H1H1 148 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 FLNCQ14315 2725 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 IGHV7-4-1A0A0J9YVY3 117 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 DUSP14O95147 198 aaKnown RBP12.1□□□□□ -0.47
SMAD6-201ENST00000288840 SMPXQ9UHP9 88 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 SDHAF1A6NFY7 115 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 PRSS29PA6NIE9 313 aa12.1□□□□□ -0.47
SMAD6-201ENST00000288840 A0A1W2PPM0 123 aa12.09□□□□□ -0.47
SMAD6-201ENST00000288840 ETDBQ3ZM63 59 aa12.09□□□□□ -0.47
SMAD6-201ENST00000288840 DCHS2Q6V1P9 2916 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms