RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CRIP2P52943 208 aaPredicted RBP13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 MYOZ3Q8TDC0 251 aa13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 K7ERJ3 54 aa13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 LAGE3Q14657 143 aa13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 NHP2Q9NX24 153 aaKnown RBP13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 SONP18583 2426 aaKnown RBP13.93□□□□□ -0.18
PDLIM3-201ENST00000284767 IGKV3D-20A0A0C4DH25 116 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 KRTAP1-3Q8IUG1 177 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 E9PLD3 99 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 BUB3O43684 328 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 PF4V1P10720 104 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 TMEM160Q9NX00 188 aa13.92□□□□□ -0.18
PDLIM3-201ENST00000284767 RPL24P83731 157 aaKnown RBP13.91□□□□□ -0.18
PDLIM3-201ENST00000284767 C10orf99Q6UWK7 81 aa13.91□□□□□ -0.18
PDLIM3-201ENST00000284767 NRACQ8N912 160 aa13.91□□□□□ -0.18
PDLIM3-201ENST00000284767 BEX4Q9NWD9 120 aaPredicted RBP13.91□□□□□ -0.18
PDLIM3-201ENST00000284767 MRPL35Q9NZE8 188 aaKnown RBP13.91□□□□□ -0.18
PDLIM3-201ENST00000284767 ITPR2Q14571 2701 aa13.91□□□□□ -0.18
PDLIM3-201ENST00000284767 A0A087WX48 190 aa13.9□□□□□ -0.18
PDLIM3-201ENST00000284767 TEX48A0A1B0GUV7 120 aa13.9□□□□□ -0.18
PDLIM3-201ENST00000284767 UNQ9165/PRO28630Q6UXU0 137 aa13.9□□□□□ -0.18
PDLIM3-201ENST00000284767 RNF182Q8N6D2 247 aa13.9□□□□□ -0.18
PDLIM3-201ENST00000284767 PLNP26678 52 aa13.9□□□□□ -0.18
PDLIM3-201ENST00000284767 FAM223BA6NKX1 122 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 F8W1H4 67 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 ARL3P36405 182 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 FAM223AQ8IWN6 122 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 AGPAT4-IT1Q9H0P7 198 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 C11orf21Q9P2W6 132 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 FLNAP21333 2647 aaKnown RBP13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 IGHV4-4A0A075B6R2 117 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 IGHV7-4-1A0A0J9YVY3 117 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 IGLL5B9A064 214 aa13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 MRPL53Q96EL3 112 aaKnown RBP13.89□□□□□ -0.19
PDLIM3-201ENST00000284767 J3QLI3 93 aa13.88□□□□□ -0.19
PDLIM3-201ENST00000284767 PLA2G2AP14555 144 aa13.88□□□□□ -0.19
PDLIM3-201ENST00000284767 FOXI2Q6ZQN5 318 aa13.88□□□□□ -0.19
PDLIM3-201ENST00000284767 TMEM78Q5T7P6 136 aa13.88□□□□□ -0.19
PDLIM3-201ENST00000284767 MAPKAPK5-AS1Q8N8E1 139 aa13.88□□□□□ -0.19
PDLIM3-201ENST00000284767 DUX5Q96PT3 197 aa13.88□□□□□ -0.19
PDLIM3-201ENST00000284767 WFDC11Q8NEX6 87 aa13.87□□□□□ -0.19
PDLIM3-201ENST00000284767 ZNF479Q96JC4 524 aa13.87□□□□□ -0.19
PDLIM3-201ENST00000284767 CUBNO60494 3623 aa13.87□□□□□ -0.19
PDLIM3-201ENST00000284767 TRAV12-1A0A0B4J245 112 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 LINC01619G3V211 115 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 C12orf74Q32Q52 190 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 SAMD13Q5VXD3 122 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 LRRC75A-AS1Q8N1F1 130 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 METTL26Q96S19 204 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 PDZD2O15018 2839 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 MRAP2Q96G30 205 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 UFC1Q9Y3C8 167 aa13.86□□□□□ -0.19
PDLIM3-201ENST00000284767 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 J3QR89 54 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 FSHBP01225 129 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 IGLV1-40P01703 118 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 SCGB1A1P11684 91 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 C9orf47Q6ZRZ4 202 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 TRAV8-2A0A0B4J237 113 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 TRAV26-2A0A0B4J265 109 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 CFHR3Q02985 330 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 SPANXN1Q5VSR9 72 aa13.85□□□□□ -0.19
PDLIM3-201ENST00000284767 ACANP16112 2415 aa13.84□□□□□ -0.19
PDLIM3-201ENST00000284767 H7C1H1 209 aa13.84□□□□□ -0.19
PDLIM3-201ENST00000284767 SPANXB1Q9NS25 103 aaPredicted RBP13.84□□□□□ -0.19
PDLIM3-201ENST00000284767 MYO9AB2RTY4 2548 aa13.84□□□□□ -0.19
PDLIM3-201ENST00000284767 F8VRH5 84 aa13.84□□□□□ -0.19
PDLIM3-201ENST00000284767 HIST1H4GQ99525 98 aa13.84□□□□□ -0.19
PDLIM3-201ENST00000284767 J3QKU1 62 aa13.83□□□□□ -0.19
PDLIM3-201ENST00000284767 HOXA3O43365 443 aaPredicted RBP13.83□□□□□ -0.19
PDLIM3-201ENST00000284767 GCN1Q92616 2671 aaKnown RBP13.83□□□□□ -0.2
PDLIM3-201ENST00000284767 EDN2P20800 178 aa13.83□□□□□ -0.2
PDLIM3-201ENST00000284767 SMIM2Q9BVW6 85 aa13.83□□□□□ -0.2
PDLIM3-201ENST00000284767 TRBV7-3A0A075B6L6 115 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 C8orf86Q6ZUL3 223 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 USMG5Q96IX5 58 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 SIGMAR1Q99720 223 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 U3KQE9 123 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 A0A1B0GWB2 263 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 CD300EQ496F6 205 aaPredicted RBP13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 ORMDL2Q53FV1 153 aa13.82□□□□□ -0.2
PDLIM3-201ENST00000284767 WFDC2Q14508 124 aa13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 RRN3P1Q2M238 152 aa13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 Q6YL49 198 aa13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 VPREB3Q9UKI3 123 aa13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 CHTOPQ9Y3Y2 248 aaKnown RBP13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 H3BUA1 57 aa13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 UNC79Q9P2D8 2635 aa13.81□□□□□ -0.2
PDLIM3-201ENST00000284767 MYMXA0A1B0GTQ4 84 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 OR11H12B2RN74 326 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 K7EMI3 77 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 CIDEAO60543 219 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 OR11H1Q8NG94 326 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 OR11H2Q8NH07 326 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 LENEPQ9Y5L5 61 aa13.8□□□□□ -0.2
PDLIM3-201ENST00000284767 IGKV3-7A0A075B6H7 116 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 H3BMG7 143 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 AZU1P20160 251 aa13.79□□□□□ -0.2
PDLIM3-201ENST00000284767 TOMM6Q96B49 74 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms