RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 PAGE4O60829 102 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 ORM1P02763 201 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 CST9LP1Q5W188 147 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 TMUB2Q71RG4 321 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 COX8CQ7Z4L0 72 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 STOML3Q8TAV4 291 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 SFT2D1Q8WV19 159 aa9.84□□□□□ -0.83
HMGN3-201ENST00000275036 IGHV3-73A0A0B4J1V6 119 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 UMAD1C9J7I0 102 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 LINC00315P59091 139 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
HMGN3-201ENST00000275036 WFDC10BQ8IUB3 73 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 PCNPQ8WW12 178 aaKnown RBP9.83□□□□□ -0.84
HMGN3-201ENST00000275036 PTH2Q96A98 100 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 FMC1Q96HJ9 113 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 KRTAP4-5Q9BYR2 181 aa9.83□□□□□ -0.84
HMGN3-201ENST00000275036 TRBV6-1A0A0K0K1D8 114 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 C16orf90A8MZG2 172 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 SH2D1AO60880 128 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 LTAP01374 205 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 KRTAP10-2P60368 255 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 UBE2G1P62253 170 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 SLC25A29Q8N8R3 303 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 ZFP30Q9Y2G7 519 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 TNFRSF18Q9Y5U5 241 aa9.82□□□□□ -0.84
HMGN3-201ENST00000275036 B4DEV8 164 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 KRBOX1C9JBD0 128 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 M0R036 132 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 PFDN1O60925 122 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 ASIPP42127 132 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 SPATA12Q7Z6I5 190 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 TXNDC17Q9BRA2 123 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 TCEAL7Q9BRU2 100 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 JPT2Q9H910 190 aa9.81□□□□□ -0.84
HMGN3-201ENST00000275036 SCO2A0A1W2PP80 73 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 GRIFINA4D1Z8 144 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 H3BVH4 76 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 H2AFB1P0C5Y9 115 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 TPT1P13693 172 aaKnown RBP9.8□□□□□ -0.84
HMGN3-201ENST00000275036 BTF3P20290 206 aaKnown RBP9.8□□□□□ -0.84
HMGN3-201ENST00000275036 S100A4P26447 101 aaKnown RBP9.8□□□□□ -0.84
HMGN3-201ENST00000275036 AKR1C3P42330 323 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 ZNF674Q2M3X9 581 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 LGALSLQ3ZCW2 172 aaPredicted RBP9.8□□□□□ -0.84
HMGN3-201ENST00000275036 DNLZQ5SXM8 178 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 FAM162BQ5T6X4 162 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 Q6ZSN1 163 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 NHLRC2Q8NBF2 726 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 IL36BQ9NZH7 164 aa9.8□□□□□ -0.84
HMGN3-201ENST00000275036 TRBV6-4A0A1B0GX49 114 aa9.79□□□□□ -0.84
HMGN3-201ENST00000275036 CIDEAO60543 219 aa9.79□□□□□ -0.84
HMGN3-201ENST00000275036 EIF5AP63241 154 aaKnown RBP9.79□□□□□ -0.84
HMGN3-201ENST00000275036 CCL20P78556 96 aa9.79□□□□□ -0.84
HMGN3-201ENST00000275036 TCTE3Q8IZS6 198 aa9.79□□□□□ -0.84
HMGN3-201ENST00000275036 PARLQ9H300 379 aa9.79□□□□□ -0.84
HMGN3-201ENST00000275036 ARMS2P0C7Q2 107 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 RHOHQ15669 191 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 PIK3CD-AS1Q5SR53 167 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 UFSP1Q6NVU6 142 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 Q6ZNX1 250 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 SAMD10Q9BYL1 202 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 LY96Q9Y6Y9 160 aa9.78□□□□□ -0.84
HMGN3-201ENST00000275036 TMSB15BA0A087X1C1 80 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 DNAH10OSP0CZ25 163 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 TIRAPP58753 221 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 SH2D6Q7Z4S9 175 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 PRADC1Q9BSG0 188 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 MLST8Q9BVC4 326 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 SCRT2Q9NQ03 307 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 Q9UF83 564 aa9.77□□□□□ -0.85
HMGN3-201ENST00000275036 A8MWV9 139 aa9.76□□□□□ -0.85
HMGN3-201ENST00000275036 CDK2AP2O75956 126 aa9.76□□□□□ -0.85
HMGN3-201ENST00000275036 MGST1P10620 155 aaKnown RBP9.76□□□□□ -0.85
HMGN3-201ENST00000275036 FUSP35637 526 aaKnown RBP eCLIP9.76□□□□□ -0.85
HMGN3-201ENST00000275036 ZFP2Q6ZN57 461 aa9.76□□□□□ -0.85
HMGN3-201ENST00000275036 TRAV1-1A0A0B4J248 108 aa9.75□□□□□ -0.85
HMGN3-201ENST00000275036 C1QBP02746 253 aa9.75□□□□□ -0.85
HMGN3-201ENST00000275036 LINC00694P0DN24 101 aa9.75□□□□□ -0.85
HMGN3-201ENST00000275036 RPL19P84098 196 aaKnown RBP9.75□□□□□ -0.85
HMGN3-201ENST00000275036 S100A9P06702 114 aaKnown RBP9.74□□□□□ -0.85
HMGN3-201ENST00000275036 SULT1A2P50226 295 aa9.74□□□□□ -0.85
HMGN3-201ENST00000275036 BAGE2Q86Y30 109 aa9.74□□□□□ -0.85
HMGN3-201ENST00000275036 C14orf178Q8N769 122 aaPredicted RBP9.74□□□□□ -0.85
HMGN3-201ENST00000275036 DERL1Q9BUN8 251 aa9.74□□□□□ -0.85
HMGN3-201ENST00000275036 GNG13Q9P2W3 67 aa9.74□□□□□ -0.85
HMGN3-201ENST00000275036 TRAV9-2A0A087WT02 112 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 IGHV3-38A0A0C4DH36 116 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 GAGE12JA6NER3 117 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 CRYGDP07320 174 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 EVI2AP22794 236 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 RPL35P42766 123 aaKnown RBP9.73□□□□□ -0.85
HMGN3-201ENST00000275036 RAB5CP51148 216 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 GAGE1Q13065 139 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 GAGE4Q13068 117 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 GAGE5Q13069 117 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 GAGE13Q4V321 117 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 SYT8Q8NBV8 401 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 ATP6V0E2Q8NHE4 81 aa9.73□□□□□ -0.85
HMGN3-201ENST00000275036 SFRP2Q96HF1 295 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms