RNA–Protein interactions for RNA: ENST00000264883.7

NUP54-201, Transcript of nucleoporin 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP54, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-201ENST00000264883 ORMDL2Q53FV1 153 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 IGFL4Q6B9Z1 124 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 SMIM2Q9BVW6 85 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 PPDPFQ9H3Y8 114 aa10.06□□□□□ -0.8
NUP54-201ENST00000264883 PLCE1Q9P212 2302 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 IGLV11-55A0A075B6I3 123 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 IGHV3-30P01768 117 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 IGHV3-30-5P0DP03 117 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 ERCC8Q13216 396 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 ZNF672Q499Z4 452 aaPredicted RBP10.05□□□□□ -0.8
NUP54-201ENST00000264883 BAALCQ8WXS3 180 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 CFHR4Q92496 578 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 TMEM126AQ9H061 195 aa10.05□□□□□ -0.8
NUP54-201ENST00000264883 TIMM23O14925 209 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 COX7A1P24310 79 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 NBASA2RRP1 2371 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 ADGRG4Q8IZF6 3080 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 E7EQL1 145 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 DPM3Q9P2X0 92 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 S4R3C0 116 aa10.04□□□□□ -0.8
NUP54-201ENST00000264883 LY6DQ14210 128 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 C21orf62Q9NYP8 219 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 KALRNO60229 2985 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 IGKV3D-20A0A0C4DH25 116 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 RBAKDNA6NC62 111 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 Q6ZS46 218 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 LY6G5BQ8NDX9 201 aa10.03□□□□□ -0.8
NUP54-201ENST00000264883 TRAV2A0A0B4J234 112 aa10.02□□□□□ -0.8
NUP54-201ENST00000264883 TIMD4Q96H15 378 aa10.02□□□□□ -0.8
NUP54-201ENST00000264883 FANCD2OSQ96PS1 177 aa10.02□□□□□ -0.8
NUP54-201ENST00000264883 ACACBO00763 2458 aa10.02□□□□□ -0.81
NUP54-201ENST00000264883 TEX49A0A1B0GTD5 131 aa10.02□□□□□ -0.81
NUP54-201ENST00000264883 HERVK_113P61574 105 aa10.02□□□□□ -0.81
NUP54-201ENST00000264883 RPL13AP40429 203 aaKnown RBP10.01□□□□□ -0.81
NUP54-201ENST00000264883 DYNAPQ8N1N2 210 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 C3orf56Q8N813 242 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 SLC25A29Q8N8R3 303 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 FBXL19-AS1Q494R0 122 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 SPANXN1Q5VSR9 72 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 C2orf66Q6UXQ4 117 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 CHCHD5Q9BSY4 110 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 C11orf21Q9P2W6 132 aa10.01□□□□□ -0.81
NUP54-201ENST00000264883 COL6A6A6NMZ7 2263 aa10□□□□□ -0.81
NUP54-201ENST00000264883 F8W735 103 aaPredicted RBP10□□□□□ -0.81
NUP54-201ENST00000264883 CD3EP07766 207 aa10□□□□□ -0.81
NUP54-201ENST00000264883 ATXN8Q156A1 80 aa10□□□□□ -0.81
NUP54-201ENST00000264883 LINC01620Q4KN68 170 aa10□□□□□ -0.81
NUP54-201ENST00000264883 LINC01587Q99440 93 aa10□□□□□ -0.81
NUP54-201ENST00000264883 SMAD5-AS1Q9Y6J3 95 aa10□□□□□ -0.81
NUP54-201ENST00000264883 RELNP78509 3460 aa10□□□□□ -0.81
NUP54-201ENST00000264883 IGHV7-4-1A0A0J9YVY3 117 aa10□□□□□ -0.81
NUP54-201ENST00000264883 OOSP1A8MZH6 123 aa10□□□□□ -0.81
NUP54-201ENST00000264883 H7C2G1 150 aa10□□□□□ -0.81
NUP54-201ENST00000264883 M0R1W7 72 aa10□□□□□ -0.81
NUP54-201ENST00000264883 IGHV3-33P01772 117 aa10□□□□□ -0.81
NUP54-201ENST00000264883 P0DMU3 169 aa10□□□□□ -0.81
NUP54-201ENST00000264883 FAM231AP0DMU4 169 aa10□□□□□ -0.81
NUP54-201ENST00000264883 FAM231CP0DMU5 169 aa10□□□□□ -0.81
NUP54-201ENST00000264883 SUMO2P61956 95 aaKnown RBP10□□□□□ -0.81
NUP54-201ENST00000264883 SLC50A1Q9BRV3 221 aa10□□□□□ -0.81
NUP54-201ENST00000264883 MALRD1Q5VYJ5 2156 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 PRAC2D3DTV9 90 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 H3BMM0 161 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 CCL21O00585 134 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 ADORA2A-AS1P86434 159 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 MRPL23Q16540 153 aaKnown RBP9.99□□□□□ -0.81
NUP54-201ENST00000264883 UBE2WQ96B02 151 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 ICE1Q9Y2F5 2266 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 C11orf86A6NJI1 115 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 LGALS9O00182 355 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 DLX1P56177 255 aa9.99□□□□□ -0.81
NUP54-201ENST00000264883 A4D1N5 150 aa9.98□□□□□ -0.81
NUP54-201ENST00000264883 ODF3BA8MYP8 253 aa9.98□□□□□ -0.81
NUP54-201ENST00000264883 IGHV4-39P01824 125 aa9.98□□□□□ -0.81
NUP54-201ENST00000264883 NRGNQ92686 78 aa9.98□□□□□ -0.81
NUP54-201ENST00000264883 LINC01600Q96MT4 127 aa9.98□□□□□ -0.81
NUP54-201ENST00000264883 IGHV4-4A0A075B6R2 117 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 PAPPA-AS1Q5QFB9 102 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 TMEM263Q8WUH6 116 aaKnown RBP9.97□□□□□ -0.81
NUP54-201ENST00000264883 MRPL53Q96EL3 112 aaKnown RBP9.97□□□□□ -0.81
NUP54-201ENST00000264883 ANKHD1Q8IWZ3 2542 aaKnown RBP9.97□□□□□ -0.81
NUP54-201ENST00000264883 CFAP46Q8IYW2 2715 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 IGLV4-69A0A075B6H9 119 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 J3KRW8 73 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 DUSP14O95147 198 aaKnown RBP9.97□□□□□ -0.81
NUP54-201ENST00000264883 CRYGDP07320 174 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 EMP1P54849 157 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 TSPEAR-AS2P59090 65 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 Q1RN00 199 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 CSDC2Q9Y534 153 aaKnown RBP9.97□□□□□ -0.81
NUP54-201ENST00000264883 ROS1P08922 2347 aa9.97□□□□□ -0.81
NUP54-201ENST00000264883 EIF4EBP3O60516 100 aaPredicted RBP9.96□□□□□ -0.81
NUP54-201ENST00000264883 ELANEP08246 267 aa9.96□□□□□ -0.81
NUP54-201ENST00000264883 CTSGP08311 255 aa9.96□□□□□ -0.81
NUP54-201ENST00000264883 ATP5J2P56134 94 aa9.96□□□□□ -0.81
NUP54-201ENST00000264883 CDSNQ15517 529 aa9.96□□□□□ -0.81
NUP54-201ENST00000264883 ZNF56Q15929 161 aa9.96□□□□□ -0.81
NUP54-201ENST00000264883 HIVEP3Q5T1R4 2406 aa9.96□□□□□ -0.81
NUP54-201ENST00000264883 IGSF10Q6WRI0 2623 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms