RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 EML6Q6ZMW3 1958 aa9.41□□□□□ -0.9
SMG6-201ENST00000263073 COA6Q5JTJ3 125 aaKnown RBP9.41□□□□□ -0.9
SMG6-201ENST00000263073 ZFP2Q6ZN57 461 aa9.41□□□□□ -0.9
SMG6-201ENST00000263073 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
SMG6-201ENST00000263073 TRAV4A0A0B4J268 109 aa9.41□□□□□ -0.9
SMG6-201ENST00000263073 IGLV1-44P01699 117 aa9.4□□□□□ -0.9
SMG6-201ENST00000263073 FAM215AQ9Y5M1 114 aa9.4□□□□□ -0.9
SMG6-201ENST00000263073 ORMDL1Q9P0S3 153 aa9.4□□□□□ -0.9
SMG6-201ENST00000263073 A0A1B0GX51 115 aa9.4□□□□□ -0.9
SMG6-201ENST00000263073 NLRC5Q86WI3 1866 aa9.4□□□□□ -0.9
SMG6-201ENST00000263073 IGKV1OR2-108A0A075B7D4 117 aa9.4□□□□□ -0.91
SMG6-201ENST00000263073 E7EUB6 86 aa9.4□□□□□ -0.91
SMG6-201ENST00000263073 PLXNA2O75051 1894 aa9.4□□□□□ -0.91
SMG6-201ENST00000263073 CLPSL1A2RUU4 121 aa9.4□□□□□ -0.91
SMG6-201ENST00000263073 LOXL1Q08397 574 aaPredicted RBP9.39□□□□□ -0.91
SMG6-201ENST00000263073 COX7B2Q8TF08 81 aa9.39□□□□□ -0.91
SMG6-201ENST00000263073 OPRPNQ99935 248 aaPredicted RBP9.39□□□□□ -0.91
SMG6-201ENST00000263073 Q9HAA7 133 aa9.39□□□□□ -0.91
SMG6-201ENST00000263073 TRAV26-1A0A087WT03 109 aa9.39□□□□□ -0.91
SMG6-201ENST00000263073 NCR3O14931 201 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 CGB3P0DN86 165 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 FOXI1Q12951 378 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 CACNA1GO43497 2377 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 IGHV4-59P01825 116 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 SLURP1P55000 103 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 SP5Q6BEB4 398 aaPredicted RBP9.38□□□□□ -0.91
SMG6-201ENST00000263073 BAALCQ8WXS3 180 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 MRPL36Q9P0J6 103 aaKnown RBP9.38□□□□□ -0.91
SMG6-201ENST00000263073 IGHG2P01859 326 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 SHANK1Q9Y566 2161 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 G3V4G9 280 aa9.38□□□□□ -0.91
SMG6-201ENST00000263073 I3L2K1 104 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 IGLV2-14P01704 120 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 SLC25A29Q8N8R3 303 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 SPATA25Q9BR10 227 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 IGKV2D-24A0A075B6R9 120 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 K7EIM0 57 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 FAM167A-AS1Q96KT0 104 aa9.37□□□□□ -0.91
SMG6-201ENST00000263073 LINC01620Q4KN68 170 aa9.36□□□□□ -0.91
SMG6-201ENST00000263073 SPANXA1Q9NS26 97 aa9.36□□□□□ -0.91
SMG6-201ENST00000263073 GOLGB1Q14789 3259 aaKnown RBP9.36□□□□□ -0.91
SMG6-201ENST00000263073 SPATA12Q7Z6I5 190 aa9.36□□□□□ -0.91
SMG6-201ENST00000263073 RPL18AQ02543 176 aaKnown RBP9.36□□□□□ -0.91
SMG6-201ENST00000263073 POU2AF1Q16633 256 aa9.36□□□□□ -0.91
SMG6-201ENST00000263073 SND1-IT1Q9HBX3 110 aa9.36□□□□□ -0.91
SMG6-201ENST00000263073 NACAE9PAV3 2078 aa9.36□□□□□ -0.91
SMG6-201ENST00000263073 IGKV1-17P01599 117 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 CEMP1Q6PRD7 247 aaPredicted RBP9.35□□□□□ -0.91
SMG6-201ENST00000263073 TEN1Q86WV5 123 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 TANC1Q9C0D5 1861 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 DEFB112Q30KQ8 113 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 CGB7P0DN87 165 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 RHOHQ15669 191 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 TNRC6BQ9UPQ9 1833 aaKnown RBP9.35□□□□□ -0.91
SMG6-201ENST00000263073 DENND4CQ5VZ89 1909 aa9.35□□□□□ -0.91
SMG6-201ENST00000263073 BLCAPP62952 87 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 HIST2H2BCQ6DN03 193 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 WFDC11Q8NEX6 87 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 RNF114Q9Y508 228 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 CACNA1BQ00975 2339 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 IGHV4-38-2P0DP08 117 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 IGHV3-30P01768 117 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 IGHV3-33P01772 117 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 IGHV3-30-3P0DP02 117 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 IGHV3-30-5P0DP03 117 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 NPBQ8NG41 125 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 DENND4AQ7Z401 1863 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 IGHV7-81A0A0B4J1V7 117 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 TMEM258P61165 79 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 WFDC9Q8NEX5 89 aa9.34□□□□□ -0.91
SMG6-201ENST00000263073 KIAA1671Q9BY89 1806 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 A0A0B4J2C4 111 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 LGALS9O00182 355 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 C11orf86A6NJI1 115 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 CTSGP08311 255 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 UBE2BP63146 152 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 AJUBAQ96IF1 538 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 RNF183Q96D59 192 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 TMEM61Q8N0U2 210 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 Q8N1Y9 231 aa9.33□□□□□ -0.92
SMG6-201ENST00000263073 WT1P19544 449 aaPredicted RBP9.32□□□□□ -0.92
SMG6-201ENST00000263073 BUB3O43684 328 aa9.32□□□□□ -0.92
SMG6-201ENST00000263073 ODF1Q14990 250 aa9.32□□□□□ -0.92
SMG6-201ENST00000263073 LINC00322Q6ZN03 302 aaPredicted RBP9.32□□□□□ -0.92
SMG6-201ENST00000263073 LECT2O14960 151 aa9.32□□□□□ -0.92
SMG6-201ENST00000263073 GDF5OSQ5U4N7 250 aa9.32□□□□□ -0.92
SMG6-201ENST00000263073 Q8NFD4 153 aa9.32□□□□□ -0.92
SMG6-201ENST00000263073 DEFB4AO15263 64 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 LHBP01229 141 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 K7ENP7 123 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 MT-ATP8P03928 68 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 PSMB8P28062 276 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 TCL1BO95988 128 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 GYPEP15421 78 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 LYPD6Q86Y78 171 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 TOMM6Q96B49 74 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 CRYGBP07316 175 aa9.31□□□□□ -0.92
SMG6-201ENST00000263073 ANAPC1Q9H1A4 1944 aa9.3□□□□□ -0.92
SMG6-201ENST00000263073 IGLV11-55A0A075B6I3 123 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms