RNA–Protein interactions for RNA: ENST00000262291.8

VMP1-201, Transcript of vacuole membrane protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMP1, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-201ENST00000262291 A0A087WW49 117 aa10.27□□□□□ -0.76
VMP1-201ENST00000262291 GAGE12HA6NDE8 117 aa10.27□□□□□ -0.76
VMP1-201ENST00000262291 K7EMI3 77 aa10.27□□□□□ -0.76
VMP1-201ENST00000262291 RIGQ13278 110 aa10.27□□□□□ -0.76
VMP1-201ENST00000262291 KHDC1LQ5JSQ8 128 aa10.27□□□□□ -0.76
VMP1-201ENST00000262291 MTURNQ8N3F0 131 aa10.27□□□□□ -0.76
VMP1-201ENST00000262291 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.27□□□□□ -0.77
VMP1-201ENST00000262291 FGF6P10767 208 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 FXYD7P58549 80 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 C11orf44Q8N8P7 122 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 OR8A1Q8NGG7 326 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 CHCHD1Q96BP2 118 aaKnown RBP10.27□□□□□ -0.77
VMP1-201ENST00000262291 FABP5P3A8MUU1 101 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 OR5AL1P0C617 328 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 FAM106AQ4KMX7 169 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 LINC01545Q5VT33 79 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 C9orf139Q6ZV77 190 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 AMN1Q8IY45 258 aa10.27□□□□□ -0.77
VMP1-201ENST00000262291 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 K7ERJ3 54 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 BRI3O95415 125 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 FABP2P12104 132 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 TWIST1Q15672 202 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 ADAMTSL5Q6ZMM2 481 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 IGKV3D-20A0A0C4DH25 116 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 SOCS3O14543 225 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 HSPB8Q9UJY1 196 aa10.26□□□□□ -0.77
VMP1-201ENST00000262291 OR5A1Q8NGJ0 315 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 WNK1Q9H4A3 2382 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 SMIM17P0DL12 118 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 NMUP48645 174 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 SAMD5Q5TGI4 173 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 PCP2Q8IVA1 136 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 C18orf15Q96N68 181 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 AGRNO00468 2067 aa10.25□□□□□ -0.77
VMP1-201ENST00000262291 AKAP9Q99996 3911 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 LOC389332A0A1B0GUA5 103 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 RBAKDNA6NC62 111 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 IGKV3-20P01619 116 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 WFDC2Q14508 124 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 COX8CQ7Z4L0 72 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 SH2D6Q7Z4S9 175 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 SLURP1P55000 103 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 CD300EQ496F6 205 aaPredicted RBP10.24□□□□□ -0.77
VMP1-201ENST00000262291 C9orf47Q6ZRZ4 202 aa10.24□□□□□ -0.77
VMP1-201ENST00000262291 ZNF688P0C7X2 276 aa10.23□□□□□ -0.77
VMP1-201ENST00000262291 HOXD3P31249 432 aaPredicted RBP10.23□□□□□ -0.77
VMP1-201ENST00000262291 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
VMP1-201ENST00000262291 YAE1D1Q9NRH1 226 aa10.23□□□□□ -0.77
VMP1-201ENST00000262291 D6R8Y8 96 aa10.23□□□□□ -0.77
VMP1-201ENST00000262291 GAS8-AS1O95177 125 aa10.23□□□□□ -0.77
VMP1-201ENST00000262291 ZNF747Q9BV97 191 aa10.23□□□□□ -0.77
VMP1-201ENST00000262291 SCGB1A1P11684 91 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 GCSHP23434 173 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 RNASE4P34096 147 aaKnown RBP10.22□□□□□ -0.77
VMP1-201ENST00000262291 SMR3AQ99954 134 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 TTTY13Q9BZ97 58 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 LGALS1P09382 135 aaKnown RBP10.22□□□□□ -0.77
VMP1-201ENST00000262291 IGLC6P0CF74 106 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 INSL3P51460 131 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 ESM1Q9NQ30 184 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 AP5S1Q9NUS5 200 aa10.22□□□□□ -0.77
VMP1-201ENST00000262291 ETDBQ3ZM63 59 aa10.21□□□□□ -0.77
VMP1-201ENST00000262291 MRPL53Q96EL3 112 aaKnown RBP10.21□□□□□ -0.77
VMP1-201ENST00000262291 DNAJC9-AS1A6NH13 148 aa10.21□□□□□ -0.78
VMP1-201ENST00000262291 CACNG7P62955 275 aa10.21□□□□□ -0.78
VMP1-201ENST00000262291 TCTEX1D4Q5JR98 221 aa10.21□□□□□ -0.78
VMP1-201ENST00000262291 Q6AWC8 147 aa10.21□□□□□ -0.78
VMP1-201ENST00000262291 ZNF580Q9UK33 172 aa10.21□□□□□ -0.78
VMP1-201ENST00000262291 UFC1Q9Y3C8 167 aa10.21□□□□□ -0.78
VMP1-201ENST00000262291 A0A1W2PRX2 142 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 FXYD2P54710 66 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 LINC01559Q495D7 138 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 MRPL51Q4U2R6 128 aaKnown RBP10.2□□□□□ -0.78
VMP1-201ENST00000262291 PSMG4Q5JS54 123 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 BOD1L2Q8IYS8 172 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 ZFAND2AQ8N6M9 145 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 H3BVH4 76 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 ELANEP08246 267 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 KRTAP1-1Q07627 177 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 GEMIN7Q9H840 131 aaKnown RBP10.2□□□□□ -0.78
VMP1-201ENST00000262291 GATA1P15976 413 aaPredicted RBP10.2□□□□□ -0.78
VMP1-201ENST00000262291 FAM104BQ5XKR9 115 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 DCANP1Q8TF63 244 aa10.2□□□□□ -0.78
VMP1-201ENST00000262291 SPAG8Q99932 426 aaPredicted RBP10.2□□□□□ -0.78
VMP1-201ENST00000262291 K7EMT4 169 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 IFI27P40305 119 aaPredicted RBP10.19□□□□□ -0.78
VMP1-201ENST00000262291 AMTNQ6UX39 209 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 Q6ZSV7 163 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 PRSS3P2Q8NHM4 247 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 OVOL1O14753 267 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 UBE2E2Q96LR5 201 aa10.19□□□□□ -0.78
VMP1-201ENST00000262291 SPANXB1Q9NS25 103 aaPredicted RBP10.19□□□□□ -0.78
VMP1-201ENST00000262291 H3BMG7 143 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 SMIM13P0DJ93 91 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 EVI2AP22794 236 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 OR11H1Q8NG94 326 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 MYOZ3Q8TDC0 251 aa10.18□□□□□ -0.78
VMP1-201ENST00000262291 PRELID3AQ96N28 172 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms