RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 TDRG1Q3Y452 100 aa20.52■□□□□ 0.88
CCM2-201ENST00000258781 AP5S1Q9NUS5 200 aa20.52■□□□□ 0.88
CCM2-201ENST00000258781 OR4C46A6NHA9 309 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 GNRH2O43555 120 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 RNASE3P12724 160 aaKnown RBP20.52■□□□□ 0.87
CCM2-201ENST00000258781 HLA-DRB4P13762 266 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 EVI2AP22794 236 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 CD300EQ496F6 205 aaPredicted RBP20.52■□□□□ 0.87
CCM2-201ENST00000258781 PHLDA3Q9Y5J5 127 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 TIMM8BQ9Y5J9 83 aaPredicted RBP20.52■□□□□ 0.87
CCM2-201ENST00000258781 HLA-DRB4X5D2U9 266 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 AGRNO00468 2067 aa20.52■□□□□ 0.87
CCM2-201ENST00000258781 SMKR1H3BMG3 65 aa20.51■□□□□ 0.87
CCM2-201ENST00000258781 NPYP01303 97 aa20.51■□□□□ 0.87
CCM2-201ENST00000258781 NCR2O95944 276 aa20.5■□□□□ 0.87
CCM2-201ENST00000258781 SPINK13Q1W4C9 94 aa20.5■□□□□ 0.87
CCM2-201ENST00000258781 Q8N976 141 aa20.5■□□□□ 0.87
CCM2-201ENST00000258781 IFI27P40305 119 aaPredicted RBP20.49■□□□□ 0.87
CCM2-201ENST00000258781 PMCHL1Q16048 86 aa20.49■□□□□ 0.87
CCM2-201ENST00000258781 TEX43Q6ZNM6 134 aa20.49■□□□□ 0.87
CCM2-201ENST00000258781 MAP6D1Q9H9H5 199 aa20.49■□□□□ 0.87
CCM2-201ENST00000258781 FBN1P35555 2871 aaKnown RBP20.49■□□□□ 0.87
CCM2-201ENST00000258781 KNCNA6PVL3 124 aa20.48■□□□□ 0.87
CCM2-201ENST00000258781 TSTD3H0UI37 97 aa20.48■□□□□ 0.87
CCM2-201ENST00000258781 NXPH4O95158 308 aa20.48■□□□□ 0.87
CCM2-201ENST00000258781 NSUN5P1Q3KNT7 163 aa20.48■□□□□ 0.87
CCM2-201ENST00000258781 SORL1Q92673 2214 aa20.48■□□□□ 0.87
CCM2-201ENST00000258781 H3BMM0 161 aa20.47■□□□□ 0.87
CCM2-201ENST00000258781 TRAV12-2A0A075B6T6 113 aa20.47■□□□□ 0.87
CCM2-201ENST00000258781 M0R381 172 aa20.47■□□□□ 0.87
CCM2-201ENST00000258781 PRIMA1Q86XR5 153 aa20.47■□□□□ 0.87
CCM2-201ENST00000258781 ZNF664Q8N3J9 261 aa20.47■□□□□ 0.87
CCM2-201ENST00000258781 ZNF256Q9Y2P7 627 aaPredicted RBP20.47■□□□□ 0.87
CCM2-201ENST00000258781 LOC389332A0A1B0GUA5 103 aa20.46■□□□□ 0.87
CCM2-201ENST00000258781 LEPROTL1O95214 131 aa20.46■□□□□ 0.87
CCM2-201ENST00000258781 MAP1LC3AQ9H492 121 aa20.46■□□□□ 0.87
CCM2-201ENST00000258781 BTF3P20290 206 aaKnown RBP20.45■□□□□ 0.86
CCM2-201ENST00000258781 KRTAP24-1Q3LI83 254 aa20.45■□□□□ 0.86
CCM2-201ENST00000258781 TNFRSF6BO95407 300 aa20.45■□□□□ 0.86
CCM2-201ENST00000258781 CD7P09564 240 aa20.45■□□□□ 0.86
CCM2-201ENST00000258781 LINC00587B1AMM8 73 aa20.44■□□□□ 0.86
CCM2-201ENST00000258781 MRAP2Q96G30 205 aa20.44■□□□□ 0.86
CCM2-201ENST00000258781 PRO1933Q9H354 126 aa20.44■□□□□ 0.86
CCM2-201ENST00000258781 IGHV1OR15-1A0A075B7D0 117 aa20.43■□□□□ 0.86
CCM2-201ENST00000258781 NDUFA11Q86Y39 141 aa20.43■□□□□ 0.86
CCM2-201ENST00000258781 DPH3P1Q9H4G8 78 aa20.43■□□□□ 0.86
CCM2-201ENST00000258781 AP1S3Q96PC3 154 aa20.43■□□□□ 0.86
CCM2-201ENST00000258781 HSPB8Q9UJY1 196 aa20.43■□□□□ 0.86
CCM2-201ENST00000258781 GAS8-AS1O95177 125 aa20.42■□□□□ 0.86
CCM2-201ENST00000258781 TMEM70Q9BUB7 260 aa20.42■□□□□ 0.86
CCM2-201ENST00000258781 IGHV3-16A0A0C4DH30 117 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 OR2K2Q8NGT1 345 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 NXT2Q9NPJ8 142 aaKnown RBP20.41■□□□□ 0.86
CCM2-201ENST00000258781 MUC4Q99102 2169 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 VWFP04275 2813 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 LINC01546A6NGU7 62 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 SPRY2O43597 315 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 C9orf85Q96MD7 179 aa20.41■□□□□ 0.86
CCM2-201ENST00000258781 RBMY1BA6NDE4 496 aaKnown RBP20.4■□□□□ 0.86
CCM2-201ENST00000258781 RBMY1EA6NEQ0 496 aaKnown RBP20.4■□□□□ 0.86
CCM2-201ENST00000258781 RBMY1DP0C7P1 496 aaKnown RBP20.4■□□□□ 0.86
CCM2-201ENST00000258781 DEFB125Q8N687 156 aa20.4■□□□□ 0.86
CCM2-201ENST00000258781 CLUHP3Q96NS8 147 aa20.4■□□□□ 0.86
CCM2-201ENST00000258781 PRSS47A8MTI9 375 aa20.39■□□□□ 0.86
CCM2-201ENST00000258781 GATA1P15976 413 aaPredicted RBP20.39■□□□□ 0.86
CCM2-201ENST00000258781 ZNF124Q15973 351 aa20.39■□□□□ 0.86
CCM2-201ENST00000258781 NRACQ8N912 160 aa20.39■□□□□ 0.86
CCM2-201ENST00000258781 KIR2DL5BA0A0G2JN68 375 aa20.39■□□□□ 0.85
CCM2-201ENST00000258781 KIR2DL5BA0A0G2JPC4 375 aa20.39■□□□□ 0.85
CCM2-201ENST00000258781 CRXO43186 299 aaPredicted RBP20.39■□□□□ 0.85
CCM2-201ENST00000258781 KIR2DL5AQ8N109 375 aa20.39■□□□□ 0.85
CCM2-201ENST00000258781 ODF3L2Q3SX64 289 aa20.38■□□□□ 0.85
CCM2-201ENST00000258781 LINC00173Q6ZV60 143 aa20.38■□□□□ 0.85
CCM2-201ENST00000258781 Q8N1Y9 231 aa20.38■□□□□ 0.85
CCM2-201ENST00000258781 CITED1Q99966 193 aa20.38■□□□□ 0.85
CCM2-201ENST00000258781 VAMP8Q9BV40 100 aa20.38■□□□□ 0.85
CCM2-201ENST00000258781 TRRAPQ9Y4A5 3859 aa20.38■□□□□ 0.85
CCM2-201ENST00000258781 C14orf178Q8N769 122 aaPredicted RBP20.37■□□□□ 0.85
CCM2-201ENST00000258781 TRGV11A0A075B6L2 103 aa20.37■□□□□ 0.85
CCM2-201ENST00000258781 A0A096LNJ9 63 aa20.37■□□□□ 0.85
CCM2-201ENST00000258781 FXYD7P58549 80 aa20.37■□□□□ 0.85
CCM2-201ENST00000258781 TRAV26-2A0A0B4J265 109 aa20.36■□□□□ 0.85
CCM2-201ENST00000258781 SYS1-DBNDD2H3BUS1 97 aa20.36■□□□□ 0.85
CCM2-201ENST00000258781 POM121L12Q8N7R1 296 aa20.36■□□□□ 0.85
CCM2-201ENST00000258781 MAP1LC3CQ9BXW4 147 aa20.36■□□□□ 0.85
CCM2-201ENST00000258781 DDTP30046 118 aa20.35■□□□□ 0.85
CCM2-201ENST00000258781 Q8N8P6 123 aa20.35■□□□□ 0.85
CCM2-201ENST00000258781 SAP30O75446 220 aa20.35■□□□□ 0.85
CCM2-201ENST00000258781 HBDP02042 147 aa20.35■□□□□ 0.85
CCM2-201ENST00000258781 MDFICQ9P1T7 246 aa20.35■□□□□ 0.85
CCM2-201ENST00000258781 RBMY1A1P0DJD3 496 aaKnown RBP20.34■□□□□ 0.85
CCM2-201ENST00000258781 RBMY1CP0DJD4 496 aa20.34■□□□□ 0.85
CCM2-201ENST00000258781 RBMY1FQ15415 496 aaKnown RBP20.34■□□□□ 0.85
CCM2-201ENST00000258781 ZNF747Q9BV97 191 aa20.34■□□□□ 0.85
CCM2-201ENST00000258781 KIF25-AS1Q9Y6Z4 181 aa20.34■□□□□ 0.85
CCM2-201ENST00000258781 CMC4P56277 68 aaPredicted RBP20.33■□□□□ 0.85
CCM2-201ENST00000258781 SYT8Q8NBV8 401 aa20.33■□□□□ 0.85
CCM2-201ENST00000258781 C20orf144Q9BQM9 153 aa20.33■□□□□ 0.85
CCM2-201ENST00000258781 IGLV2-18A0A075B6J9 118 aa20.33■□□□□ 0.84
CCM2-201ENST00000258781 OR11H12B2RN74 326 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms