RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 OR10J6PQ8NGY7 276 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 JMJD1CQ15652 2540 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 C2orf66Q6UXQ4 117 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 Q8N9W7 124 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 EEF1AKMT3Q96AZ1 226 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 ANXA2RQ3ZCQ2 193 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 RAX2Q96IS3 184 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 C20orf78Q9BR46 151 aa9.18□□□□□ -0.94
USHBP1-201ENST00000252597 UNQ9165/PRO28630Q6UXU0 137 aa9.17□□□□□ -0.94
USHBP1-201ENST00000252597 SPAG8Q99932 426 aaPredicted RBP9.17□□□□□ -0.94
USHBP1-201ENST00000252597 BPESC1Q9GZL8 116 aa9.17□□□□□ -0.94
USHBP1-201ENST00000252597 SIVA1O15304 175 aa9.17□□□□□ -0.94
USHBP1-201ENST00000252597 CIDEAO60543 219 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 SUMO2P61956 95 aaKnown RBP9.16□□□□□ -0.94
USHBP1-201ENST00000252597 RPL39P62891 51 aaKnown RBP9.16□□□□□ -0.94
USHBP1-201ENST00000252597 PAX8Q06710 450 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 ZFP2Q6ZN57 461 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 OR11H6Q8NGC7 330 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 A0A087WX48 190 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 H7C1H1 209 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 ASIPP42127 132 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 NPC2P61916 151 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 FOXI2Q6ZQN5 318 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 NPBQ8NG41 125 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 PLEKHB2Q96CS7 222 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 CCDC140Q96MF4 163 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 SMIM2Q9BVW6 85 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 IGHV3-73A0A0B4J1V6 119 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 TRBV6-1A0A0K0K1D8 114 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 PRSS29PA6NIE9 313 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 DUSP14O95147 198 aaKnown RBP9.16□□□□□ -0.94
USHBP1-201ENST00000252597 UCNP55089 124 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 SLC50A1Q9BRV3 221 aa9.16□□□□□ -0.94
USHBP1-201ENST00000252597 F8VRH5 84 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 SYT8Q8NBV8 401 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 SRSF8Q9BRL6 282 aaKnown RBP9.15□□□□□ -0.94
USHBP1-201ENST00000252597 TRAV12-2A0A075B6T6 113 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 TRAV12-3A0A0B4J271 114 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 MYMXA0A1B0GTQ4 84 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 NDUFS8O00217 210 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 PRSS2P07478 247 aa9.15□□□□□ -0.94
USHBP1-201ENST00000252597 OPRPNQ99935 248 aaPredicted RBP9.15□□□□□ -0.94
USHBP1-201ENST00000252597 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.95
USHBP1-201ENST00000252597 CD7P09564 240 aa9.15□□□□□ -0.95
USHBP1-201ENST00000252597 C20orf173Q96LM9 149 aa9.15□□□□□ -0.95
USHBP1-201ENST00000252597 TP53TG1Q9Y2A0 90 aa9.14□□□□□ -0.95
USHBP1-201ENST00000252597 TRAV8-2A0A0B4J237 113 aa9.14□□□□□ -0.95
USHBP1-201ENST00000252597 ZNF56Q15929 161 aa9.14□□□□□ -0.95
USHBP1-201ENST00000252597 LINC01559Q495D7 138 aa9.14□□□□□ -0.95
USHBP1-201ENST00000252597 DUX5Q96PT3 197 aa9.14□□□□□ -0.95
USHBP1-201ENST00000252597 PLNP26678 52 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 RRN3P1Q2M238 152 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 C1orf122Q6ZSJ8 110 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 NRACQ8N912 160 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 SMPXQ9UHP9 88 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 TRAV2A0A0B4J234 112 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 IGHV7-4-1A0A0J9YVY3 117 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 EDN2P20800 178 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 RNASE13Q5GAN3 156 aaKnown RBP9.13□□□□□ -0.95
USHBP1-201ENST00000252597 ZFAND3Q9H8U3 227 aa9.13□□□□□ -0.95
USHBP1-201ENST00000252597 SPANXB1Q9NS25 103 aaPredicted RBP9.13□□□□□ -0.95
USHBP1-201ENST00000252597 ZNF688P0C7X2 276 aa9.12□□□□□ -0.95
USHBP1-201ENST00000252597 TRAV41A0A0B4J266 112 aa9.12□□□□□ -0.95
USHBP1-201ENST00000252597 M0R1W7 72 aa9.12□□□□□ -0.95
USHBP1-201ENST00000252597 CKS1BP61024 79 aa9.12□□□□□ -0.95
USHBP1-201ENST00000252597 TMEM95Q3KNT9 176 aa9.12□□□□□ -0.95
USHBP1-201ENST00000252597 FAM159AQ6UWV7 190 aa9.12□□□□□ -0.95
USHBP1-201ENST00000252597 FAM110DQ8TAY7 271 aaPredicted RBP9.12□□□□□ -0.95
USHBP1-201ENST00000252597 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 E9PLD3 99 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 LGALS1P09382 135 aaKnown RBP9.11□□□□□ -0.95
USHBP1-201ENST00000252597 GATD1Q8NB37 220 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 TRAV21A0A0B4J279 112 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 CLPSL1A2RUU4 121 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 RAB9AP51151 201 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 ORMDL2Q53FV1 153 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 ZNF575Q86XF7 245 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 LY6G5BQ8NDX9 201 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 DPH3P1Q9H4G8 78 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 RASL10AQ92737 203 aa9.11□□□□□ -0.95
USHBP1-201ENST00000252597 A0A0U1RRA0 63 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 F8W1H4 67 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 IGHV4-39P01824 125 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 BAALCQ8WXS3 180 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 KLK9Q9UKQ9 250 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 A0A1W2PPR1 153 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 BLCAPP62952 87 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 TM2D2Q9BX73 214 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 ANKRD17O75179 2603 aaKnown RBP9.1□□□□□ -0.95
USHBP1-201ENST00000252597 C11orf86A6NJI1 115 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 ODF3BA8MYP8 253 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 SPINK8P0C7L1 97 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 HIGD1BQ9P298 99 aa9.1□□□□□ -0.95
USHBP1-201ENST00000252597 NPFFO15130 113 aa9.09□□□□□ -0.95
USHBP1-201ENST00000252597 HERVK_113P61574 105 aa9.09□□□□□ -0.95
USHBP1-201ENST00000252597 PHLDA1Q8WV24 401 aaPredicted RBP9.09□□□□□ -0.95
USHBP1-201ENST00000252597 KIR2DL4Q99706 377 aa9.09□□□□□ -0.95
USHBP1-201ENST00000252597 RHPN1-AS1Q9BWJ2 59 aa9.09□□□□□ -0.95
USHBP1-201ENST00000252597 IGSF10Q6WRI0 2623 aa9.09□□□□□ -0.95
USHBP1-201ENST00000252597 A6NJY4 79 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms