RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 ZFP2Q6ZN57 461 aa4.84□□□□□ -1.64
SGIP1-201ENST00000237247 Q71RC1 249 aaPredicted RBP4.84□□□□□ -1.64
SGIP1-201ENST00000237247 LINC00477Q96M19 166 aa4.84□□□□□ -1.64
SGIP1-201ENST00000237247 HIST1H4GQ99525 98 aa4.84□□□□□ -1.64
SGIP1-201ENST00000237247 PCNX2A6NKB5 2137 aa4.84□□□□□ -1.64
SGIP1-201ENST00000237247 H3BTX0 84 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 IGKCP01834 107 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 EDN2P20800 178 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 CKS2P33552 79 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 KLRB1Q12918 225 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 ZC2HC1BQ5TFG8 222 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 C3orf56Q8N813 242 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 C17orf77Q96MU5 243 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 M0R1W7 72 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 EGR2P11161 476 aaPredicted RBP4.83□□□□□ -1.64
SGIP1-201ENST00000237247 SLC25A16P16260 332 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 TWIST1Q15672 202 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 DEFB109BQ30KR1 87 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 GAGE2AQ6NT46 116 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 Q8N6K4 173 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 INTS1Q8N201 2190 aaKnown RBP4.83□□□□□ -1.64
SGIP1-201ENST00000237247 TNCP24821 2201 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 A0A0G2JNJ9 132 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 DPM2O94777 84 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
SGIP1-201ENST00000237247 GFRALQ6UXV0 394 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 FANCD2OSQ96PS1 177 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 Q9UFV3 132 aa4.83□□□□□ -1.64
SGIP1-201ENST00000237247 MAPKAPK5-AS1Q8N8E1 139 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 SLC50A1Q9BRV3 221 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 AGRNO00468 2067 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 FAM236AA0A1B0GUQ0 79 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 FAM236BA0A1B0GV22 79 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 CD3EP07766 207 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 CXCL5P42830 114 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 EFNA4P52798 201 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 C6orf226Q5I0X4 101 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 SDIM1Q6ZPB5 146 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 HEATR1Q9H583 2144 aaKnown RBP4.82□□□□□ -1.64
SGIP1-201ENST00000237247 LINC01549A6NIU2 74 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 PLNP26678 52 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 PLEKHB2Q96CS7 222 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 TTTY13Q9BZ97 58 aa4.82□□□□□ -1.64
SGIP1-201ENST00000237247 KLK5Q9Y337 293 aaPredicted RBP4.82□□□□□ -1.64
SGIP1-201ENST00000237247 IGHV3-72A0A0B4J1Y9 119 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 P0DMU3 169 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 FAM231AP0DMU4 169 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 FAM231CP0DMU5 169 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 ZNF415Q09FC8 603 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 RNF152Q8N8N0 203 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 CCL17Q92583 94 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 C9orf85Q96MD7 179 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 PYGO1Q9Y3Y4 419 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 E7EQL1 145 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 M0R3E3 92 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 Q8NA96 180 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 DYNLRB1Q9NP97 96 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 DPM3Q9P2X0 92 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 CACNA1HO95180 2353 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 LRBAP50851 2863 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 IGHV3-21A0A0B4J1V1 117 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 MED14OSP0DP75 135 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 PSMB8P28062 276 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 TMEM170BQ5T4T1 132 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 LENEPQ9Y5L5 61 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 SMAD5-AS1Q9Y6J3 95 aa4.81□□□□□ -1.64
SGIP1-201ENST00000237247 TRGV11A0A075B6L2 103 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 LOC389332A0A1B0GUA5 103 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 RPL35AP18077 110 aaKnown RBP4.8□□□□□ -1.64
SGIP1-201ENST00000237247 LEPP41159 167 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 ZNF80P51504 273 aaPredicted RBP4.8□□□□□ -1.64
SGIP1-201ENST00000237247 NDUFA11Q86Y39 141 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 NRACQ8N912 160 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 TRACP01848 142 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 ACYP1P07311 99 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 MINOS1Q5TGZ0 78 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 MINOS1-NBL1R4GNA1 71 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 OTOGLQ3ZCN5 2332 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 LOC107984156A0A0G2JMH3 177 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 FBXL19-AS1Q494R0 122 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 C5orf38Q86SI9 138 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 ARL17AQ8IVW1 177 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 IGKV2-40A0A087WW87 121 aaPredicted RBP4.8□□□□□ -1.64
SGIP1-201ENST00000237247 M0R381 172 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 IGKV2D-40P01614 121 aaPredicted RBP4.8□□□□□ -1.64
SGIP1-201ENST00000237247 PRIMA1Q86XR5 153 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 ZFAND3Q9H8U3 227 aa4.8□□□□□ -1.64
SGIP1-201ENST00000237247 CNTRLQ7Z7A1 2325 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 NCBP2LA6PVI3 153 aaKnown RBP4.79□□□□□ -1.64
SGIP1-201ENST00000237247 LAGE3Q14657 143 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 FAM110DQ8TAY7 271 aaPredicted RBP4.79□□□□□ -1.64
SGIP1-201ENST00000237247 C1orf43Q9BWL3 253 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 TP53TG1Q9Y2A0 90 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 RIF1Q5UIP0 2472 aaKnown RBP4.79□□□□□ -1.64
SGIP1-201ENST00000237247 EP300Q09472 2414 aaPredicted RBP4.79□□□□□ -1.64
SGIP1-201ENST00000237247 CFAP46Q8IYW2 2715 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 NDUFC2-KCTD14E9PQ53 114 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 J3QQQ9 107 aa4.79□□□□□ -1.64
SGIP1-201ENST00000237247 C9orf47Q6ZRZ4 202 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms