RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SMAD5-AS1Q9Y6J3 95 aa14.3□□□□□ -0.12
CLIP2-201ENST00000223398 K7EN84 100 aa14.3□□□□□ -0.12
CLIP2-201ENST00000223398 MRPL35Q9NZE8 188 aaKnown RBP14.3□□□□□ -0.12
CLIP2-201ENST00000223398 TNCP24821 2201 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 BUB3O43684 328 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 ICOSQ9Y6W8 199 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 IGHG2P01859 326 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 C4orf3Q8WVX3 66 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 E7EUB6 86 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 GATA1P15976 413 aaPredicted RBP14.29□□□□□ -0.12
CLIP2-201ENST00000223398 LMO4P61968 165 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 TEX22C9J3V5 150 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 PYY3Q5JQD4 70 aa14.29□□□□□ -0.12
CLIP2-201ENST00000223398 RBAKDNA6NC62 111 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 C5orf38Q86SI9 138 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 C11orf52Q96A22 123 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 SCRT2Q9NQ03 307 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 IGHV4-31P0DP07 118 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 MRPL23Q16540 153 aaKnown RBP14.28□□□□□ -0.12
CLIP2-201ENST00000223398 PATE2Q6UY27 113 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 ODF3L1Q8IXM7 274 aa14.28□□□□□ -0.12
CLIP2-201ENST00000223398 PIEZO1Q92508 2521 aa14.27□□□□□ -0.12
CLIP2-201ENST00000223398 TRAV25A0A0B4J276 109 aa14.27□□□□□ -0.12
CLIP2-201ENST00000223398 HERVK_113P63121 156 aa14.27□□□□□ -0.12
CLIP2-201ENST00000223398 PRAC2D3DTV9 90 aa14.27□□□□□ -0.12
CLIP2-201ENST00000223398 Q6ZSR3 168 aa14.27□□□□□ -0.12
CLIP2-201ENST00000223398 ATP6V0E2Q8NHE4 81 aa14.27□□□□□ -0.12
CLIP2-201ENST00000223398 A6NDX4 124 aa14.27□□□□□ -0.13
CLIP2-201ENST00000223398 GAGE2AQ6NT46 116 aa14.27□□□□□ -0.13
CLIP2-201ENST00000223398 ZNF48Q96MX3 618 aaPredicted RBP14.26□□□□□ -0.13
CLIP2-201ENST00000223398 C9JAW5 83 aa14.26□□□□□ -0.13
CLIP2-201ENST00000223398 OVOL2Q9BRP0 275 aa14.26□□□□□ -0.13
CLIP2-201ENST00000223398 UNQ9165/PRO28630Q6UXU0 137 aa14.26□□□□□ -0.13
CLIP2-201ENST00000223398 DENND4AQ7Z401 1863 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 SRSF2Q01130 221 aaKnown RBP14.25□□□□□ -0.13
CLIP2-201ENST00000223398 RPL18AQ02543 176 aaKnown RBP14.25□□□□□ -0.13
CLIP2-201ENST00000223398 RPL39LQ96EH5 51 aaKnown RBP14.25□□□□□ -0.13
CLIP2-201ENST00000223398 C20orf78Q9BR46 151 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 NACAE9PAV3 2078 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 IL15RAQ13261 267 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 RPL32P62910 135 aaKnown RBP14.25□□□□□ -0.13
CLIP2-201ENST00000223398 LENEPQ9Y5L5 61 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 LINC01548A6NM66 108 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 DNAJC30Q96LL9 226 aa14.25□□□□□ -0.13
CLIP2-201ENST00000223398 K7EQD1 137 aa14.24□□□□□ -0.13
CLIP2-201ENST00000223398 TMEM61Q8N0U2 210 aa14.24□□□□□ -0.13
CLIP2-201ENST00000223398 PROP1O75360 226 aa14.24□□□□□ -0.13
CLIP2-201ENST00000223398 COL4A4P53420 1690 aaPredicted RBP14.24□□□□□ -0.13
CLIP2-201ENST00000223398 WNK1Q9H4A3 2382 aa14.24□□□□□ -0.13
CLIP2-201ENST00000223398 DEFB125Q8N687 156 aa14.24□□□□□ -0.13
CLIP2-201ENST00000223398 TAL2Q16559 108 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 OCIAD2Q56VL3 154 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 SUMO4Q6EEV6 95 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 LRRC75A-AS1Q8N1F1 130 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 ZNF493Q6ZR52 646 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 Q8N1Y9 231 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 HIVEP3Q5T1R4 2406 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 MRPL36Q9P0J6 103 aaKnown RBP14.23□□□□□ -0.13
CLIP2-201ENST00000223398 TEX48A0A1B0GUV7 120 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 GPHB5Q86YW7 130 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 MSRB1Q9NZV6 116 aa14.23□□□□□ -0.13
CLIP2-201ENST00000223398 TNFRSF13BO14836 293 aaPredicted RBP14.22□□□□□ -0.13
CLIP2-201ENST00000223398 HIST2H2BDQ6DRA6 164 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 ZNF664Q8N3J9 261 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 IGF2RP11717 2491 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 CCDC168Q8NDH2 2452 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 PCDH15Q96QU1 1955 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 IGLL5B9A064 214 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 AMTNQ6UX39 209 aa14.22□□□□□ -0.13
CLIP2-201ENST00000223398 CRYGCP07315 174 aa14.21□□□□□ -0.13
CLIP2-201ENST00000223398 DKK2Q9UBU2 259 aa14.21□□□□□ -0.14
CLIP2-201ENST00000223398 KMT2EQ8IZD2 1858 aa14.21□□□□□ -0.14
CLIP2-201ENST00000223398 F8VRH5 84 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 GAGE2EQ4V326 116 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 GAGE2DQ9UEU5 116 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 WI2-2373I1.2A0A1W2PRP0 233 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 J3QQQ9 107 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 K7EMT4 169 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 RNF152Q8N8N0 203 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 HHLA3Q9XRX5 114 aa14.2□□□□□ -0.14
CLIP2-201ENST00000223398 UTF1Q5T230 341 aa14.19□□□□□ -0.14
CLIP2-201ENST00000223398 CAMK2N2Q96S95 79 aa14.19□□□□□ -0.14
CLIP2-201ENST00000223398 SRCAPQ6ZRS2 3230 aa14.19□□□□□ -0.14
CLIP2-201ENST00000223398 POLR3KQ9Y2Y1 108 aaPredicted RBP14.19□□□□□ -0.14
CLIP2-201ENST00000223398 PCP4P48539 62 aa14.19□□□□□ -0.14
CLIP2-201ENST00000223398 LYPD6Q86Y78 171 aa14.19□□□□□ -0.14
CLIP2-201ENST00000223398 IGHV4-4A0A075B6R2 117 aa14.18□□□□□ -0.14
CLIP2-201ENST00000223398 IGLV2-14P01704 120 aa14.18□□□□□ -0.14
CLIP2-201ENST00000223398 MTURNQ8N3F0 131 aa14.18□□□□□ -0.14
CLIP2-201ENST00000223398 CD5LO43866 347 aa14.18□□□□□ -0.14
CLIP2-201ENST00000223398 DEFB105AQ8NG35 78 aa14.18□□□□□ -0.14
CLIP2-201ENST00000223398 BOD1L2Q8IYS8 172 aa14.18□□□□□ -0.14
CLIP2-201ENST00000223398 Q6ZWC4 215 aa14.17□□□□□ -0.14
CLIP2-201ENST00000223398 Q9H8V8 135 aa14.17□□□□□ -0.14
CLIP2-201ENST00000223398 MYO18BQ8IUG5 2567 aa14.17□□□□□ -0.14
CLIP2-201ENST00000223398 TMEM131Q92545 1883 aa14.17□□□□□ -0.14
CLIP2-201ENST00000223398 FANCD2OSQ96PS1 177 aa14.17□□□□□ -0.14
CLIP2-201ENST00000223398 TMEM89A2RUT3 159 aa14.16□□□□□ -0.14
CLIP2-201ENST00000223398 Q6YL49 198 aa14.16□□□□□ -0.14
CLIP2-201ENST00000223398 LGALS9BQ3B8N2 356 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms