RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 GAGE13Q4V321 117 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 PHLDA1Q8WV24 401 aaPredicted RBP11.67□□□□□ -0.54
TGFB1-201ENST00000221930 PRO0461Q9UI25 63 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 TRAV41A0A0B4J266 112 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 TRBV12-3P01733 135 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 DEFB1P60022 68 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 KLK9Q2XQG4 91 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 C16orf92Q96LL3 132 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
TGFB1-201ENST00000221930 SPRY2O43597 315 aa11.66□□□□□ -0.54
TGFB1-201ENST00000221930 ZFAND6Q6FIF0 208 aa11.66□□□□□ -0.54
TGFB1-201ENST00000221930 UNQ9165/PRO28630Q6UXU0 137 aa11.66□□□□□ -0.54
TGFB1-201ENST00000221930 VPREB3Q9UKI3 123 aa11.66□□□□□ -0.54
TGFB1-201ENST00000221930 USP9XQ93008 2570 aaPredicted RBP11.66□□□□□ -0.54
TGFB1-201ENST00000221930 IGHV4-39P01824 125 aa11.66□□□□□ -0.54
TGFB1-201ENST00000221930 IGHV7-4-1A0A0J9YVY3 117 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 PRR9Q5T870 116 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 PIFOQ8TCI5 191 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 TRAV40A0A0B4J280 105 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 APOMO95445 188 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 PRSS1P07477 247 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 TMEM158Q8WZ71 300 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 C20orf173Q96LM9 149 aa11.65□□□□□ -0.54
TGFB1-201ENST00000221930 H3BMG7 143 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 FCER1GP30273 86 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 LY6EQ16553 131 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 C5orf47Q569G3 176 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 TTTY13Q9BZ97 58 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 MOB4Q9Y3A3 225 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 U3KQE9 123 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 CSPG4Q6UVK1 2322 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 TEX29Q8N6K0 151 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 NXT2Q9NPJ8 142 aaKnown RBP11.64□□□□□ -0.55
TGFB1-201ENST00000221930 LRRK2Q5S007 2527 aa11.64□□□□□ -0.55
TGFB1-201ENST00000221930 H3BVH4 76 aa11.63□□□□□ -0.55
TGFB1-201ENST00000221930 IGHV3-11P01762 117 aa11.63□□□□□ -0.55
TGFB1-201ENST00000221930 SPANXN1Q5VSR9 72 aa11.63□□□□□ -0.55
TGFB1-201ENST00000221930 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
TGFB1-201ENST00000221930 IGKV3-7A0A075B6H7 116 aa11.63□□□□□ -0.55
TGFB1-201ENST00000221930 IGKV2D-26A0A0A0MRZ7 120 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 M0QXV9 152 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 VCX2Q9H322 139 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 FXYD2P54710 66 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 TM4SF20Q53R12 229 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 USP9YO00507 2555 aaPredicted RBP11.62□□□□□ -0.55
TGFB1-201ENST00000221930 IGHV4-61A0A0C4DH41 118 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 A0A1B0GWB2 263 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 IGHV4-38-2P0DP08 117 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 RPL11P62913 178 aaKnown RBP11.62□□□□□ -0.55
TGFB1-201ENST00000221930 GLMPQ8WWB7 406 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 FOXC2Q99958 501 aa11.62□□□□□ -0.55
TGFB1-201ENST00000221930 IGLV2-18A0A075B6J9 118 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 IGHV1-69DA0A0B4J2H0 117 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 LINC01546A6NGU7 62 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 PRSS29PA6NIE9 313 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 IGLL5B9A064 214 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 IGHV1-69P01742 117 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 FHL3Q13643 280 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 PIMREGQ9BSJ6 248 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 HIGD1BQ9P298 99 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 HHLA3Q9XRX5 114 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 C19orf54Q5BKX5 351 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 GPHB5Q86YW7 130 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 Q8N8P6 123 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 NRACQ8N912 160 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 KLK15Q9H2R5 256 aa11.61□□□□□ -0.55
TGFB1-201ENST00000221930 ZNF462Q96JM2 2506 aa11.6□□□□□ -0.55
TGFB1-201ENST00000221930 SRD5A1P18405 259 aa11.6□□□□□ -0.55
TGFB1-201ENST00000221930 GCSHP23434 173 aa11.6□□□□□ -0.55
TGFB1-201ENST00000221930 DSCR9P59020 149 aa11.6□□□□□ -0.55
TGFB1-201ENST00000221930 MRPL53Q96EL3 112 aaKnown RBP11.6□□□□□ -0.55
TGFB1-201ENST00000221930 FAM223BA6NKX1 122 aa11.6□□□□□ -0.55
TGFB1-201ENST00000221930 FAM223AQ8IWN6 122 aa11.6□□□□□ -0.55
TGFB1-201ENST00000221930 F6UB75 175 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 M0R381 172 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 WIPF1O43516 503 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 Q6ZS46 218 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 GTSCR1Q86UQ5 136 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 PTH2Q96A98 100 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 BLCAPP62952 87 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
TGFB1-201ENST00000221930 PPDPFQ9H3Y8 114 aa11.59□□□□□ -0.55
TGFB1-201ENST00000221930 CCDC179H3BU77 68 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 TMEM160Q9NX00 188 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 H3BUX3 64 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 K7ERJ3 54 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 RHODO00212 210 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 IGKCP01834 107 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 C9orf139Q6ZV77 190 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 ZMAT4Q9H898 229 aa11.58□□□□□ -0.56
TGFB1-201ENST00000221930 LAGE3Q14657 143 aa11.57□□□□□ -0.56
TGFB1-201ENST00000221930 ZC2HC1BQ5TFG8 222 aa11.57□□□□□ -0.56
TGFB1-201ENST00000221930 CCL19Q99731 98 aa11.57□□□□□ -0.56
TGFB1-201ENST00000221930 TRAV25A0A0B4J276 109 aa11.57□□□□□ -0.56
TGFB1-201ENST00000221930 NDUFV3P56181 108 aaKnown RBP11.57□□□□□ -0.56
TGFB1-201ENST00000221930 ZFAND2AQ8N6M9 145 aa11.57□□□□□ -0.56
TGFB1-201ENST00000221930 C10orf105Q8TEF2 133 aa11.57□□□□□ -0.56
TGFB1-201ENST00000221930 NRGNQ92686 78 aa11.56□□□□□ -0.56
TGFB1-201ENST00000221930 MRPL35Q9NZE8 188 aaKnown RBP11.56□□□□□ -0.56
TGFB1-201ENST00000221930 OR10J6PQ8NGY7 276 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms