RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 BVES-AS1Q5T3Y7 98 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 C18orf65Q6ZTR6 163 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 RHPN1-AS1Q9BWJ2 59 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 UFC1Q9Y3C8 167 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 NF1P21359 2839 aa12.8□□□□□ -0.36
CHGA-201ENST00000216492 CCL25O15444 150 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 KHDC1LQ5JSQ8 128 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 C11orf21Q9P2W6 132 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 OVOL1O14753 267 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 FXYD7P58549 80 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 OR10J6PQ8NGY7 276 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 LINC00477Q96M19 166 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 SMPXQ9UHP9 88 aa12.79□□□□□ -0.36
CHGA-201ENST00000216492 HIVEP1P15822 2718 aa12.78□□□□□ -0.36
CHGA-201ENST00000216492 FCER1GP30273 86 aa12.78□□□□□ -0.36
CHGA-201ENST00000216492 HOXD3P31249 432 aaPredicted RBP12.78□□□□□ -0.36
CHGA-201ENST00000216492 SYNJ2BPP57105 145 aa12.78□□□□□ -0.36
CHGA-201ENST00000216492 IGHV4-4A0A075B6R2 117 aa12.77□□□□□ -0.36
CHGA-201ENST00000216492 LEPP41159 167 aa12.77□□□□□ -0.36
CHGA-201ENST00000216492 SPANXN1Q5VSR9 72 aa12.77□□□□□ -0.36
CHGA-201ENST00000216492 C4orf3Q8WVX3 66 aa12.77□□□□□ -0.36
CHGA-201ENST00000216492 SNAI2O43623 268 aa12.77□□□□□ -0.37
CHGA-201ENST00000216492 EVI2AP22794 236 aa12.77□□□□□ -0.37
CHGA-201ENST00000216492 RPL11P62913 178 aaKnown RBP12.77□□□□□ -0.37
CHGA-201ENST00000216492 DEFB136Q30KP8 78 aa12.77□□□□□ -0.37
CHGA-201ENST00000216492 PSMG4Q5JS54 123 aa12.77□□□□□ -0.37
CHGA-201ENST00000216492 Q8N8P6 123 aa12.77□□□□□ -0.37
CHGA-201ENST00000216492 OR11H1Q8NG94 326 aa12.77□□□□□ -0.37
CHGA-201ENST00000216492 LGALS9O00182 355 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 EDN2P20800 178 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 C11orf44Q8N8P7 122 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 OR2K2Q8NGT1 345 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 C20orf173Q96LM9 149 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 HIST2H2BDQ6DRA6 164 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 DEFB125Q8N687 156 aa12.76□□□□□ -0.37
CHGA-201ENST00000216492 LINC01619G3V211 115 aa12.75□□□□□ -0.37
CHGA-201ENST00000216492 KLHL30-AS1Q8NEE0 82 aa12.75□□□□□ -0.37
CHGA-201ENST00000216492 WFDC12Q8WWY7 111 aa12.75□□□□□ -0.37
CHGA-201ENST00000216492 TRAV21A0A0B4J279 112 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 SOCS3O14543 225 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 NDUFA7O95182 113 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 CD28P10747 220 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 C2orf91Q6ZV80 131 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 Q6ZVH6 145 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 CRLF1O75462 422 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 C18orf15Q96N68 181 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 DUX3Q96PT4 197 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 SELENOKQ9Y6D0 94 aa12.74□□□□□ -0.37
CHGA-201ENST00000216492 IGKV3-7A0A075B6H7 116 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 PRSS47A8MTI9 375 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 H3BVH4 76 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 FGF6P10767 208 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 SLURP1P55000 103 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 BOD1L2Q8IYS8 172 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 OR9G4Q8NGQ1 327 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 MRAP2Q96G30 205 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 GATA1P15976 413 aaPredicted RBP12.73□□□□□ -0.37
CHGA-201ENST00000216492 PRR9Q5T870 116 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 WFDC3Q8IUB2 231 aa12.73□□□□□ -0.37
CHGA-201ENST00000216492 TAX1BP3O14907 124 aa12.72□□□□□ -0.37
CHGA-201ENST00000216492 ATP5LO75964 103 aa12.72□□□□□ -0.37
CHGA-201ENST00000216492 SEC11AP67812 179 aa12.72□□□□□ -0.37
CHGA-201ENST00000216492 VAMP3Q15836 100 aa12.72□□□□□ -0.37
CHGA-201ENST00000216492 ZFAND2AQ8N6M9 145 aa12.72□□□□□ -0.37
CHGA-201ENST00000216492 SIVA1O15304 175 aa12.71□□□□□ -0.37
CHGA-201ENST00000216492 PRSS1P07477 247 aa12.71□□□□□ -0.37
CHGA-201ENST00000216492 TMEM97Q5BJF2 176 aa12.71□□□□□ -0.37
CHGA-201ENST00000216492 NRACQ8N912 160 aa12.71□□□□□ -0.37
CHGA-201ENST00000216492 TMEM158Q8WZ71 300 aa12.71□□□□□ -0.37
CHGA-201ENST00000216492 CITED2Q99967 270 aaPredicted RBP12.71□□□□□ -0.37
CHGA-201ENST00000216492 FN1P02751 2386 aaKnown RBP12.71□□□□□ -0.37
CHGA-201ENST00000216492 IGLV2-18A0A075B6J9 118 aa12.71□□□□□ -0.38
CHGA-201ENST00000216492 TRBV7-9A0A0J9YWB2 115 aa12.71□□□□□ -0.38
CHGA-201ENST00000216492 A0A1W2PRX2 142 aa12.71□□□□□ -0.38
CHGA-201ENST00000216492 S100A4P26447 101 aaKnown RBP12.71□□□□□ -0.38
CHGA-201ENST00000216492 ASIPP42127 132 aa12.71□□□□□ -0.38
CHGA-201ENST00000216492 LAGE3Q14657 143 aa12.71□□□□□ -0.38
CHGA-201ENST00000216492 DKK2Q9UBU2 259 aa12.71□□□□□ -0.38
CHGA-201ENST00000216492 TSSC4Q9Y5U2 329 aaPredicted RBP12.71□□□□□ -0.38
CHGA-201ENST00000216492 J3KRW8 73 aa12.7□□□□□ -0.38
CHGA-201ENST00000216492 SAMD13Q5VXD3 122 aa12.7□□□□□ -0.38
CHGA-201ENST00000216492 Q6ZQT7 251 aa12.7□□□□□ -0.38
CHGA-201ENST00000216492 MED14OSP0DP75 135 aa12.69□□□□□ -0.38
CHGA-201ENST00000216492 PROK1P58294 105 aa12.69□□□□□ -0.38
CHGA-201ENST00000216492 ODF1Q14990 250 aa12.69□□□□□ -0.38
CHGA-201ENST00000216492 OR4C5Q8NGB2 326 aa12.69□□□□□ -0.38
CHGA-201ENST00000216492 TRAV26-2A0A0B4J265 109 aa12.69□□□□□ -0.38
CHGA-201ENST00000216492 NMUP48645 174 aa12.69□□□□□ -0.38
CHGA-201ENST00000216492 DLX4Q92988 240 aaPredicted RBP12.69□□□□□ -0.38
CHGA-201ENST00000216492 NSD1Q96L73 2696 aaPredicted RBP12.69□□□□□ -0.38
CHGA-201ENST00000216492 SETD2Q9BYW2 2564 aaPredicted RBP12.69□□□□□ -0.38
CHGA-201ENST00000216492 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
CHGA-201ENST00000216492 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
CHGA-201ENST00000216492 FAM19A4Q96LR4 140 aa12.68□□□□□ -0.38
CHGA-201ENST00000216492 ZMAT4Q9H898 229 aa12.68□□□□□ -0.38
CHGA-201ENST00000216492 PEMTQ9UBM1 199 aa12.68□□□□□ -0.38
CHGA-201ENST00000216492 HSD52Q0P140 79 aa12.68□□□□□ -0.38
CHGA-201ENST00000216492 CHTOPQ9Y3Y2 248 aaKnown RBP12.68□□□□□ -0.38
CHGA-201ENST00000216492 PHLDA3Q9Y5J5 127 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms