RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 TCF21O43680 179 aa13.75□□□□□ -0.21
CTSA-201ENST00000191018 NXPH4O95158 308 aa13.75□□□□□ -0.21
CTSA-201ENST00000191018 IFI27P40305 119 aaPredicted RBP13.75□□□□□ -0.21
CTSA-201ENST00000191018 TIMM8BQ9Y5J9 83 aaPredicted RBP13.75□□□□□ -0.21
CTSA-201ENST00000191018 GAS8-AS1O95177 125 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 MUC4Q99102 2169 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 SETXQ7Z333 2677 aaKnown RBP13.74□□□□□ -0.21
CTSA-201ENST00000191018 NSD1Q96L73 2696 aaPredicted RBP13.74□□□□□ -0.21
CTSA-201ENST00000191018 M0R381 172 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 SPRY2O43597 315 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 TEX43Q6ZNM6 134 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 FA2HQ7L5A8 372 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 ZNF664Q8N3J9 261 aa13.74□□□□□ -0.21
CTSA-201ENST00000191018 CD7P09564 240 aa13.73□□□□□ -0.21
CTSA-201ENST00000191018 ZNF124Q15973 351 aa13.73□□□□□ -0.21
CTSA-201ENST00000191018 LOC389332A0A1B0GUA5 103 aa13.72□□□□□ -0.21
CTSA-201ENST00000191018 RBMY1BA6NDE4 496 aaKnown RBP13.72□□□□□ -0.21
CTSA-201ENST00000191018 RBMY1EA6NEQ0 496 aaKnown RBP13.72□□□□□ -0.21
CTSA-201ENST00000191018 RBMY1DP0C7P1 496 aaKnown RBP13.72□□□□□ -0.21
CTSA-201ENST00000191018 KRTAP10-3P60369 221 aa13.72□□□□□ -0.21
CTSA-201ENST00000191018 PKIAP61925 76 aa13.72□□□□□ -0.21
CTSA-201ENST00000191018 WNK1Q9H4A3 2382 aa13.72□□□□□ -0.21
CTSA-201ENST00000191018 SETD2Q9BYW2 2564 aaPredicted RBP13.72□□□□□ -0.21
CTSA-201ENST00000191018 CRXO43186 299 aaPredicted RBP13.72□□□□□ -0.21
CTSA-201ENST00000191018 TNFRSF6BO95407 300 aa13.72□□□□□ -0.21
CTSA-201ENST00000191018 HIVEP1P15822 2718 aa13.71□□□□□ -0.21
CTSA-201ENST00000191018 IGHV1OR15-1A0A075B7D0 117 aa13.71□□□□□ -0.21
CTSA-201ENST00000191018 IGHV3-16A0A0C4DH30 117 aa13.71□□□□□ -0.21
CTSA-201ENST00000191018 LEPROTL1O95214 131 aa13.71□□□□□ -0.21
CTSA-201ENST00000191018 LINC01546A6NGU7 62 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 GATA1P15976 413 aaPredicted RBP13.7□□□□□ -0.22
CTSA-201ENST00000191018 BTF3P20290 206 aaKnown RBP13.7□□□□□ -0.22
CTSA-201ENST00000191018 ODF3L2Q3SX64 289 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 C9orf85Q96MD7 179 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 MAP1LC3AQ9H492 121 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 DPH3P1Q9H4G8 78 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 A0A096LNJ9 63 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 LINC00587B1AMM8 73 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 RBMY1A1P0DJD3 496 aaKnown RBP13.7□□□□□ -0.22
CTSA-201ENST00000191018 RBMY1CP0DJD4 496 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 RBMY1FQ15415 496 aaKnown RBP13.7□□□□□ -0.22
CTSA-201ENST00000191018 NSUN5P1Q3KNT7 163 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 NDUFA11Q86Y39 141 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 Q8N1Y9 231 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 DEFB125Q8N687 156 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 NRACQ8N912 160 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 MRAP2Q96G30 205 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 CLUHP3Q96NS8 147 aa13.7□□□□□ -0.22
CTSA-201ENST00000191018 FN1P02751 2386 aaKnown RBP13.69□□□□□ -0.22
CTSA-201ENST00000191018 PRSS47A8MTI9 375 aa13.69□□□□□ -0.22
CTSA-201ENST00000191018 TSTD3H0UI37 97 aa13.69□□□□□ -0.22
CTSA-201ENST00000191018 CRLF1O75462 422 aa13.69□□□□□ -0.22
CTSA-201ENST00000191018 LINC00173Q6ZV60 143 aa13.69□□□□□ -0.22
CTSA-201ENST00000191018 OR2K2Q8NGT1 345 aa13.69□□□□□ -0.22
CTSA-201ENST00000191018 PRO1933Q9H354 126 aa13.69□□□□□ -0.22
CTSA-201ENST00000191018 FXYD7P58549 80 aa13.68□□□□□ -0.22
CTSA-201ENST00000191018 C14orf178Q8N769 122 aaPredicted RBP13.68□□□□□ -0.22
CTSA-201ENST00000191018 AP1S3Q96PC3 154 aa13.68□□□□□ -0.22
CTSA-201ENST00000191018 TRAV26-2A0A0B4J265 109 aa13.67□□□□□ -0.22
CTSA-201ENST00000191018 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
CTSA-201ENST00000191018 TMEM70Q9BUB7 260 aa13.67□□□□□ -0.22
CTSA-201ENST00000191018 MDFICQ9P1T7 246 aa13.67□□□□□ -0.22
CTSA-201ENST00000191018 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
CTSA-201ENST00000191018 IGLV1-51P01701 117 aa13.67□□□□□ -0.22
CTSA-201ENST00000191018 NXT2Q9NPJ8 142 aaKnown RBP13.67□□□□□ -0.22
CTSA-201ENST00000191018 IGLV2-18A0A075B6J9 118 aa13.66□□□□□ -0.22
CTSA-201ENST00000191018 KIR2DL5BA0A0G2JN68 375 aa13.66□□□□□ -0.22
CTSA-201ENST00000191018 KIR2DL5BA0A0G2JPC4 375 aa13.66□□□□□ -0.22
CTSA-201ENST00000191018 SAP30O75446 220 aa13.66□□□□□ -0.22
CTSA-201ENST00000191018 KIR2DL5AQ8N109 375 aa13.66□□□□□ -0.22
CTSA-201ENST00000191018 HSPB8Q9UJY1 196 aa13.66□□□□□ -0.22
CTSA-201ENST00000191018 SPATA12Q7Z6I5 190 aa13.65□□□□□ -0.22
CTSA-201ENST00000191018 TRGV11A0A075B6L2 103 aa13.65□□□□□ -0.22
CTSA-201ENST00000191018 SYS1-DBNDD2H3BUS1 97 aa13.65□□□□□ -0.22
CTSA-201ENST00000191018 LINC00315P59091 139 aa13.65□□□□□ -0.22
CTSA-201ENST00000191018 Q8N8P6 123 aa13.64□□□□□ -0.23
CTSA-201ENST00000191018 ZNF747Q9BV97 191 aa13.64□□□□□ -0.23
CTSA-201ENST00000191018 OR11H12B2RN74 326 aa13.63□□□□□ -0.23
CTSA-201ENST00000191018 VAMP8Q9BV40 100 aa13.63□□□□□ -0.23
CTSA-201ENST00000191018 HBDP02042 147 aa13.63□□□□□ -0.23
CTSA-201ENST00000191018 DDTP30046 118 aa13.63□□□□□ -0.23
CTSA-201ENST00000191018 RASL10AQ92737 203 aa13.63□□□□□ -0.23
CTSA-201ENST00000191018 MAP1LC3CQ9BXW4 147 aa13.63□□□□□ -0.23
CTSA-201ENST00000191018 FAM110AQ9BQ89 295 aa13.62□□□□□ -0.23
CTSA-201ENST00000191018 C20orf144Q9BQM9 153 aa13.62□□□□□ -0.23
CTSA-201ENST00000191018 JPT2Q9H910 190 aa13.62□□□□□ -0.23
CTSA-201ENST00000191018 C2CD3Q4AC94 2353 aa13.62□□□□□ -0.23
CTSA-201ENST00000191018 CBY3A6NI87 242 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 CMC4P56277 68 aaPredicted RBP13.61□□□□□ -0.23
CTSA-201ENST00000191018 PET117Q6UWS5 81 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 TRPT1Q86TN4 253 aaKnown RBP13.61□□□□□ -0.23
CTSA-201ENST00000191018 SYT8Q8NBV8 401 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 LINC00467Q9BRT7 94 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 MGPP08493 103 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 BEAN1Q3B7T3 259 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 STHQ8IWL8 128 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 LINC00482Q8N8I6 264 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 PAM16Q9Y3D7 125 aa13.61□□□□□ -0.23
CTSA-201ENST00000191018 SMIM17P0DL12 118 aa13.6□□□□□ -0.23
CTSA-201ENST00000191018 C20orf78Q9BR46 151 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms