RNA–Protein interactions for RNA: ENST00000187762.6

TMEM38A-201, Transcript of transmembrane protein 38A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM38A, Length 2,649 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM38A-201ENST00000187762 SCGB3A1Q96QR1 104 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 SPXQ9BT56 116 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 KLK15Q9H2R5 256 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 ABCA4P78363 2273 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 BUB1B-PAK6H3BSN5 160 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 FOXC1Q12948 553 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 PDE6HQ13956 83 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 TEX49A0A1B0GTD5 131 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 IGHV3-30P01768 117 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 IGHV3-30-5P0DP03 117 aa11.39□□□□□ -0.59
TMEM38A-201ENST00000187762 I3L2K1 104 aa11.38□□□□□ -0.59
TMEM38A-201ENST00000187762 LINC00694P0DN24 101 aa11.38□□□□□ -0.59
TMEM38A-201ENST00000187762 GRNP28799 593 aaKnown RBP11.38□□□□□ -0.59
TMEM38A-201ENST00000187762 RPL13AP40429 203 aaKnown RBP11.38□□□□□ -0.59
TMEM38A-201ENST00000187762 CD3EP07766 207 aa11.38□□□□□ -0.59
TMEM38A-201ENST00000187762 ZNF491Q8N8L2 437 aa11.38□□□□□ -0.59
TMEM38A-201ENST00000187762 B9A039 149 aa11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 LY6HO94772 140 aa11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 Q6ZS46 218 aa11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 RNF125Q96EQ8 232 aa11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 TIMM23O14925 209 aa11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 DUSP14O95147 198 aaKnown RBP11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 IL17RELQ6ZVW7 336 aa11.37□□□□□ -0.59
TMEM38A-201ENST00000187762 MRPL23Q16540 153 aaKnown RBP11.36□□□□□ -0.59
TMEM38A-201ENST00000187762 BAALCQ8WXS3 180 aa11.36□□□□□ -0.59
TMEM38A-201ENST00000187762 TOMM6Q96B49 74 aa11.36□□□□□ -0.59
TMEM38A-201ENST00000187762 PTPRQQ9UMZ3 2332 aa11.35□□□□□ -0.59
TMEM38A-201ENST00000187762 LGALS9O00182 355 aa11.35□□□□□ -0.59
TMEM38A-201ENST00000187762 ERCC8Q13216 396 aa11.35□□□□□ -0.59
TMEM38A-201ENST00000187762 LINC01620Q4KN68 170 aa11.35□□□□□ -0.59
TMEM38A-201ENST00000187762 SMIM2Q9BVW6 85 aa11.35□□□□□ -0.59
TMEM38A-201ENST00000187762 H3BMM0 161 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 UBE2WQ96B02 151 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 TIMD4Q96H15 378 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 LINC01600Q96MT4 127 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 S4R3C0 116 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 ANKHD1Q8IWZ3 2542 aaKnown RBP11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 SVEP1Q4LDE5 3571 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 LOC107984640A0A0U1RRK4 108 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 SMIM9A6NGZ8 99 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 IGHV3-33P01772 117 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 P0DMU3 169 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 FAM231AP0DMU4 169 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 FAM231CP0DMU5 169 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 ZNF672Q499Z4 452 aaPredicted RBP11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 ORMDL2Q53FV1 153 aa11.34□□□□□ -0.59
TMEM38A-201ENST00000187762 NBASA2RRP1 2371 aa11.33□□□□□ -0.59
TMEM38A-201ENST00000187762 RPL7P18124 248 aaKnown RBP11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 LY6DQ14210 128 aa11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 ATXN8Q156A1 80 aa11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 SLC25A29Q8N8R3 303 aa11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 EIF4EBP3O60516 100 aaPredicted RBP11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 ELANEP08246 267 aa11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 ZNF56Q15929 161 aa11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 CFHR4Q92496 578 aa11.33□□□□□ -0.6
TMEM38A-201ENST00000187762 H7C2G1 150 aa11.32□□□□□ -0.6
TMEM38A-201ENST00000187762 SPTA1P02549 2419 aa11.32□□□□□ -0.6
TMEM38A-201ENST00000187762 HRNRQ86YZ3 2850 aaPredicted RBP11.32□□□□□ -0.6
TMEM38A-201ENST00000187762 TRBV10-2A0A0K0K1G8 114 aa11.32□□□□□ -0.6
TMEM38A-201ENST00000187762 LY6LH3BQJ8 138 aa11.32□□□□□ -0.6
TMEM38A-201ENST00000187762 IGFL4Q6B9Z1 124 aa11.32□□□□□ -0.6
TMEM38A-201ENST00000187762 TRBV7-7A0A0K0K1E9 115 aa11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 K7EIM0 57 aa11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 M0R2P5 195 aa11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 CDSNQ15517 529 aa11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 IGHV4-39P01824 125 aa11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 NBL1P41271 181 aa11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 TMEM263Q8WUH6 116 aaKnown RBP11.31□□□□□ -0.6
TMEM38A-201ENST00000187762 IGKV3D-20A0A0C4DH25 116 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 A4D1N5 150 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 HERVK_113P61574 105 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 HES1Q14469 280 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 C2orf66Q6UXQ4 117 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 C11orf86A6NJI1 115 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 NDUFA7O95182 113 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
TMEM38A-201ENST00000187762 OOSP1A8MZH6 123 aa11.29□□□□□ -0.6
TMEM38A-201ENST00000187762 K7ENP7 123 aa11.29□□□□□ -0.6
TMEM38A-201ENST00000187762 C9orf153Q5TBE3 101 aa11.29□□□□□ -0.6
TMEM38A-201ENST00000187762 NPFFO15130 113 aa11.29□□□□□ -0.6
TMEM38A-201ENST00000187762 PF4V1P10720 104 aa11.29□□□□□ -0.6
TMEM38A-201ENST00000187762 C11orf21Q9P2W6 132 aa11.29□□□□□ -0.6
TMEM38A-201ENST00000187762 FAM236AA0A1B0GUQ0 79 aa11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 FAM236BA0A1B0GV22 79 aa11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 EMP1P54849 157 aa11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 FAM19A5Q7Z5A7 132 aaPredicted RBP11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 CRYGDP07320 174 aa11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 LRRC75A-AS1Q8N1F1 130 aa11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 DYNAPQ8N1N2 210 aa11.28□□□□□ -0.6
TMEM38A-201ENST00000187762 IGLV4-69A0A075B6H9 119 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 A0A0B4J2C4 111 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 IGHV7-4-1A0A0J9YVY3 117 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 NBR2O15453 112 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 EBI3Q14213 229 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 Q1RN00 199 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 C3orf22Q8N5N4 141 aa11.27□□□□□ -0.6
TMEM38A-201ENST00000187762 ASH1LQ9NR48 2969 aaKnown RBP11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 FAM240AA0A1B0GVK7 77 aa11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 J3KT08 172 aa11.27□□□□□ -0.61
TMEM38A-201ENST00000187762 WIPF1O43516 503 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms