RNA–Protein interactions for RNA: ENST00000080059.11

HDAC7-201, Transcript of histone deacetylase 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HDAC7, Length 4,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-201ENST00000080059 LENEPQ9Y5L5 61 aa10.1□□□□□ -0.79
HDAC7-201ENST00000080059 LINC01549A6NIU2 74 aa10.1□□□□□ -0.79
HDAC7-201ENST00000080059 H3BRM9 83 aa10.1□□□□□ -0.79
HDAC7-201ENST00000080059 LGALS1P09382 135 aaKnown RBP10.1□□□□□ -0.79
HDAC7-201ENST00000080059 RPL36AP83881 106 aaKnown RBP10.1□□□□□ -0.79
HDAC7-201ENST00000080059 RPL36ALQ969Q0 106 aaKnown RBP10.1□□□□□ -0.79
HDAC7-201ENST00000080059 MRPL53Q96EL3 112 aaKnown RBP10.1□□□□□ -0.79
HDAC7-201ENST00000080059 CHCHD5Q9BSY4 110 aa10.1□□□□□ -0.79
HDAC7-201ENST00000080059 MLST8Q9BVC4 326 aa10.1□□□□□ -0.79
HDAC7-201ENST00000080059 MRPS16Q9Y3D3 137 aaKnown RBP10.1□□□□□ -0.79
HDAC7-201ENST00000080059 ZNF48Q96MX3 618 aaPredicted RBP10.09□□□□□ -0.79
HDAC7-201ENST00000080059 MRPL35Q9NZE8 188 aaKnown RBP10.09□□□□□ -0.79
HDAC7-201ENST00000080059 ANKRD17O75179 2603 aaKnown RBP10.09□□□□□ -0.79
HDAC7-201ENST00000080059 DKK2Q9UBU2 259 aa10.09□□□□□ -0.79
HDAC7-201ENST00000080059 EBI3Q14213 229 aa10.08□□□□□ -0.8
HDAC7-201ENST00000080059 ZNF80P51504 273 aaPredicted RBP10.08□□□□□ -0.8
HDAC7-201ENST00000080059 ATP6V0BQ99437 205 aa10.08□□□□□ -0.8
HDAC7-201ENST00000080059 TET2Q6N021 2002 aaPredicted RBP10.08□□□□□ -0.8
HDAC7-201ENST00000080059 A6NDX4 124 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 DEFB130BP0DP73 79 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 DEFB130AP0DP74 79 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 PCSK5Q92824 1860 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 LGALS9BQ3B8N2 356 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 LGALS9CQ6DKI2 356 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 TRPT1Q86TN4 253 aaKnown RBP10.07□□□□□ -0.8
HDAC7-201ENST00000080059 IGHV4OR15-8A0A075B7B6 117 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 A0A087WW49 117 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 A0A1B0GWB2 263 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 GDF5OSQ5U4N7 250 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 CMC4P56277 68 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-201ENST00000080059 CFHR3Q02985 330 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 SPXQ9BT56 116 aa10.07□□□□□ -0.8
HDAC7-201ENST00000080059 ZNF292O60281 2723 aa10.06□□□□□ -0.8
HDAC7-201ENST00000080059 APRG1Q8IVJ8 170 aa10.06□□□□□ -0.8
HDAC7-201ENST00000080059 OR13C6PQ8NH95 151 aa10.06□□□□□ -0.8
HDAC7-201ENST00000080059 IGHV3-38A0A0C4DH36 116 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 KIR2DL5BA0A0G2JN68 375 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 KIR2DL5BA0A0G2JPC4 375 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 KIR3DS1Q14943 382 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 SAMD5Q5TGI4 173 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 KIR2DL5AQ8N109 375 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 CHAC1Q9BUX1 264 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 C1QTNF4Q9BXJ3 329 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 ADARB2-AS1A8MUL3 147 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 MBD6Q96DN6 1003 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 MEGF9Q9H1U4 602 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 TRAV13-1A0A0B4J241 112 aa10.05□□□□□ -0.8
HDAC7-201ENST00000080059 RPL39LQ96EH5 51 aaKnown RBP10.05□□□□□ -0.8
HDAC7-201ENST00000080059 C9orf47Q6ZRZ4 202 aa10.04□□□□□ -0.8
HDAC7-201ENST00000080059 NPC2P61916 151 aa10.04□□□□□ -0.8
HDAC7-201ENST00000080059 A0A1B0GXF2 115 aa10.04□□□□□ -0.8
HDAC7-201ENST00000080059 COX8AP10176 69 aa10.04□□□□□ -0.8
HDAC7-201ENST00000080059 FOXI2Q6ZQN5 318 aa10.04□□□□□ -0.8
HDAC7-201ENST00000080059 RAI1Q7Z5J4 1906 aaPredicted RBP10.03□□□□□ -0.8
HDAC7-201ENST00000080059 CCL24O00175 119 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 RNF114Q9Y508 228 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 ESDP10768 282 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 MYCNOSP40205 109 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 FLNBO75369 2602 aaKnown RBP10.03□□□□□ -0.8
HDAC7-201ENST00000080059 F8VRH5 84 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 CD5LO43866 347 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 GPHB5Q86YW7 130 aa10.03□□□□□ -0.8
HDAC7-201ENST00000080059 TNRC6BQ9UPQ9 1833 aaKnown RBP10.03□□□□□ -0.8
HDAC7-201ENST00000080059 A8MWV9 139 aa10.02□□□□□ -0.8
HDAC7-201ENST00000080059 ZNF124Q15973 351 aa10.02□□□□□ -0.8
HDAC7-201ENST00000080059 GAGE12JA6NER3 117 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 C2orf70A6NJV1 201 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 RHODO00212 210 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE1Q13065 139 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE4Q13068 117 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE5Q13069 117 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE13Q4V321 117 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 Q6ZVH6 145 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 COX11Q9Y6N1 276 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 SPEGQ15772 3267 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 IGF1P05019 195 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 CRIP1P50238 77 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 C10orf99Q6UWK7 81 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 Q8N6K4 173 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 ZNRF2Q8NHG8 242 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 C20orf78Q9BR46 151 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 K7EMT4 169 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 PMVKQ15126 192 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 MRPL52Q86TS9 123 aaKnown RBP10.02□□□□□ -0.81
HDAC7-201ENST00000080059 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 ZFAND3Q9H8U3 227 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 EYSQ5T1H1 3165 aa10.02□□□□□ -0.81
HDAC7-201ENST00000080059 TRBV6-1A0A0K0K1D8 114 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE12BA1L429 117 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE7O76087 117 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE12FP0CL80 117 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE12GP0CL81 117 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 GAGE12IP0CL82 117 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 AZU1P20160 251 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 CTRLP40313 264 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 PCP2Q8IVA1 136 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 OR5A1Q8NGJ0 315 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 I3L3M4 83 aa10.01□□□□□ -0.81
HDAC7-201ENST00000080059 UBE2V1Q13404 147 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms