RNA–Protein interactions for RNA: ENST00000640388.1

ATM-230, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-230ENST00000640388 C1QBP02746 253 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 PRM2P04554 102 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 SERPINE1P05121 402 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 CBR1P16152 277 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 GZMHP20718 246 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 G6PCP35575 357 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 PPP1R2P41236 205 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 SERPINB9P50453 376 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 SNRPFP62306 86 aaKnown RBP1.23□□□□□ -2.21
ATM-230ENST00000640388 RPL30P62888 115 aaKnown RBP1.23□□□□□ -2.21
ATM-230ENST00000640388 KRR1Q13601 381 aaKnown RBP1.23□□□□□ -2.21
ATM-230ENST00000640388 POU6F1Q14863 301 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 KCNJ8Q15842 424 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 PABPC1L2AQ5JQF8 200 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 PPP1R2P3Q6NXS1 205 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 LYZL1Q6UWQ5 148 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 TMED4Q7Z7H5 227 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 LHFPL1Q86WI0 220 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 ANKRD29Q8N6D5 301 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 OR5C1Q8NGR4 320 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 FAM172AQ8WUF8 416 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 TOMM6Q96B49 74 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 ERMAPQ96PL5 475 aaPredicted RBP1.23□□□□□ -2.21
ATM-230ENST00000640388 TTTY13Q9BZ97 58 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 DPH3P1Q9H4G8 78 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 MINOS1-NBL1R4GNA1 71 aa1.23□□□□□ -2.21
ATM-230ENST00000640388 TMEM269A0A1B0GVZ9 245 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 CRYZL1O95825 349 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 IGKV1-5P01602 117 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 NFYAP23511 347 aaPredicted RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BOP23527 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BBP33778 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BDP58876 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 RPS20P60866 119 aaKnown RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 HSPE1P61604 102 aaKnown RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 CNBPP62633 177 aaKnown RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BCP62807 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 CDK5R1Q15078 307 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 TAF1AQ15573 450 aaPredicted RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST2H2BEQ16778 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 HACD4Q5VWC8 232 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 OR11H6Q8NGC7 330 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 OR5J2Q8NH18 312 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 ACOT12Q8WYK0 555 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 SLC7A6Q92536 515 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BHQ93079 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 GPR146Q96CH1 333 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 CEP19Q96LK0 163 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 DNAJC30Q96LL9 226 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 PHB2Q99623 299 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BNQ99877 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 HIST1H2BMQ99879 126 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 DERL1Q9BUN8 251 aa1.22□□□□□ -2.21
ATM-230ENST00000640388 RBM7Q9Y580 266 aaKnown RBP1.22□□□□□ -2.21
ATM-230ENST00000640388 TRAV9-1A0A075B6T8 112 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 TRAV38-1A0A0B4J264 116 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 FABP5P3A8MUU1 101 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 TMEM238C9JI98 176 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 CCL22O00626 93 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 MRPL33O75394 65 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 ZNF189O75820 626 aaPredicted RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 IGHV3-7P01780 117 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 C8GP07360 202 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 BPGMP07738 259 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 LGALS1P09382 135 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 PPIBP23284 216 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 VBP1P61758 197 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 HBA1P69905 142 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 RPL19P84098 196 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 ZNF90Q03938 601 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 RPL18Q07020 188 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 FOXF1Q12946 379 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 SS18Q15532 418 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 SPANXN3Q5MJ09 141 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 AADACL3Q5VUY0 350 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 FAM173BQ6P4H8 233 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 AGTRAPQ6RW13 159 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 STX12Q86Y82 276 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 PACRGLQ8N7B6 248 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 MYOZ3Q8TDC0 251 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 GNPDA2Q8TDQ7 276 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 MRPS24Q96EL2 167 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 C2orf50Q96LR7 162 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 CCDC90BQ9GZT6 254 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 NDUFB11Q9NX14 153 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 PRO2289Q9P1D8 64 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 HHLA3Q9XRX5 114 aa1.21□□□□□ -2.22
ATM-230ENST00000640388 FAM32AQ9Y421 112 aaKnown RBP1.21□□□□□ -2.22
ATM-230ENST00000640388 IGHV3-64A0A075B6Q5 118 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 TRAV7A0A075B6U4 112 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 IGKV1D-43A0A0B4J1Z2 117 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 GGT3PA6NGU5 568 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 J3QRK9 145 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 CREBL2O60519 120 aaPredicted RBP1.2□□□□□ -2.22
ATM-230ENST00000640388 SULT1A3P0DMM9 295 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 SULT1A4P0DMN0 295 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 MSNP26038 577 aaKnown RBP1.2□□□□□ -2.22
ATM-230ENST00000640388 SDC4P31431 198 aa1.2□□□□□ -2.22
ATM-230ENST00000640388 RPL28P46779 137 aaKnown RBP1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms