RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 TYMSP04818 313 aa13.89□□□□□ -0.19
HLA-A-209ENST00000638375 MGST1P10620 155 aaKnown RBP13.89□□□□□ -0.19
HLA-A-209ENST00000638375 PRR27Q6MZM9 219 aa13.89□□□□□ -0.19
HLA-A-209ENST00000638375 SMIM7Q9BQ49 75 aa13.89□□□□□ -0.19
HLA-A-209ENST00000638375 OCC1Q8TAD7 63 aa13.88□□□□□ -0.19
HLA-A-209ENST00000638375 KCNS1Q96KK3 526 aa13.88□□□□□ -0.19
HLA-A-209ENST00000638375 SDF2L1Q9HCN8 221 aa13.88□□□□□ -0.19
HLA-A-209ENST00000638375 GSN-AS1Q9NRJ2 163 aa13.88□□□□□ -0.19
HLA-A-209ENST00000638375 DKK2Q9UBU2 259 aa13.88□□□□□ -0.19
HLA-A-209ENST00000638375 TRGV11A0A075B6L2 103 aa13.87□□□□□ -0.19
HLA-A-209ENST00000638375 ZNF727A8MUV8 499 aa13.87□□□□□ -0.19
HLA-A-209ENST00000638375 IBA57Q5T440 356 aaKnown RBP13.87□□□□□ -0.19
HLA-A-209ENST00000638375 FAM222AQ5U5X8 452 aa13.87□□□□□ -0.19
HLA-A-209ENST00000638375 IL17DQ8TAD2 202 aa13.87□□□□□ -0.19
HLA-A-209ENST00000638375 MDFICQ9P1T7 246 aa13.87□□□□□ -0.19
HLA-A-209ENST00000638375 IGHV3-16A0A0C4DH30 117 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 K7EN84 100 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 M0R036 132 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 ORM1P02763 201 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 TCL1AP56279 114 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 OR5I1Q13606 314 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 LINC01559Q495D7 138 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 WWC2-AS2Q96NR7 200 aa13.86□□□□□ -0.19
HLA-A-209ENST00000638375 NOP10Q9NPE3 64 aaKnown RBP13.86□□□□□ -0.19
HLA-A-209ENST00000638375 TIMM8BQ9Y5J9 83 aaPredicted RBP13.86□□□□□ -0.19
HLA-A-209ENST00000638375 DNAH7Q8WXX0 4024 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 CXorf65A6NEN9 183 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 SNURFLB1AK76 121 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 KRBOX1C9JBD0 128 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 NANOS2P60321 138 aaKnown RBP13.85□□□□□ -0.19
HLA-A-209ENST00000638375 ZNF415Q09FC8 603 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 ZNF575Q86XF7 245 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 C11orf45Q8TAV5 145 aa13.85□□□□□ -0.19
HLA-A-209ENST00000638375 LINC00862A6NCI5 91 aa13.84□□□□□ -0.19
HLA-A-209ENST00000638375 C19orf71A6NCJ1 209 aa13.84□□□□□ -0.19
HLA-A-209ENST00000638375 B4DEV8 164 aa13.84□□□□□ -0.19
HLA-A-209ENST00000638375 SPART-AS1P0CW21 52 aa13.84□□□□□ -0.19
HLA-A-209ENST00000638375 RPL19P84098 196 aaKnown RBP13.84□□□□□ -0.19
HLA-A-209ENST00000638375 DAZ2Q13117 558 aaKnown RBP13.84□□□□□ -0.19
HLA-A-209ENST00000638375 LY96Q9Y6Y9 160 aa13.84□□□□□ -0.19
HLA-A-209ENST00000638375 TMSB15BA0A087X1C1 80 aa13.83□□□□□ -0.2
HLA-A-209ENST00000638375 LYRM9A8MSI8 78 aa13.83□□□□□ -0.2
HLA-A-209ENST00000638375 C12orf74Q32Q52 190 aa13.83□□□□□ -0.2
HLA-A-209ENST00000638375 FAM74A3Q4VXF1 159 aa13.83□□□□□ -0.2
HLA-A-209ENST00000638375 SOHLH1Q5JUK2 328 aa13.83□□□□□ -0.2
HLA-A-209ENST00000638375 COMMD7Q86VX2 200 aa13.83□□□□□ -0.2
HLA-A-209ENST00000638375 TEX48A0A1B0GUV7 120 aa13.82□□□□□ -0.2
HLA-A-209ENST00000638375 SFTA3P0C7M3 94 aa13.82□□□□□ -0.2
HLA-A-209ENST00000638375 LINC01551Q86U37 167 aa13.82□□□□□ -0.2
HLA-A-209ENST00000638375 BIN3Q9NQY0 253 aa13.82□□□□□ -0.2
HLA-A-209ENST00000638375 GRIFINA4D1Z8 144 aa13.81□□□□□ -0.2
HLA-A-209ENST00000638375 RNASE3P12724 160 aaKnown RBP13.81□□□□□ -0.2
HLA-A-209ENST00000638375 UQCC3Q6UW78 93 aa13.81□□□□□ -0.2
HLA-A-209ENST00000638375 LINC00612Q8N6U2 182 aa13.81□□□□□ -0.2
HLA-A-209ENST00000638375 DAZAP1Q96EP5 407 aaKnown RBP13.81□□□□□ -0.2
HLA-A-209ENST00000638375 C9orf85Q96MD7 179 aa13.81□□□□□ -0.2
HLA-A-209ENST00000638375 SPINK4O60575 86 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 ASIPP42127 132 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 TMEM241Q24JQ0 296 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 DNLZQ5SXM8 178 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 Q6ZTI0 123 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 NUDT10Q8NFP7 164 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 NUDT11Q96G61 164 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 SPXQ9BT56 116 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 RNASE7Q9H1E1 156 aaKnown RBP13.8□□□□□ -0.2
HLA-A-209ENST00000638375 NAT8Q9UHE5 227 aa13.8□□□□□ -0.2
HLA-A-209ENST00000638375 P01737 135 aa13.79□□□□□ -0.2
HLA-A-209ENST00000638375 DEFB130BP0DP73 79 aa13.79□□□□□ -0.2
HLA-A-209ENST00000638375 DEFB130AP0DP74 79 aa13.79□□□□□ -0.2
HLA-A-209ENST00000638375 DAD1P61803 113 aa13.79□□□□□ -0.2
HLA-A-209ENST00000638375 RPL23P62829 140 aaKnown RBP13.79□□□□□ -0.2
HLA-A-209ENST00000638375 Q6ZTC4 211 aa13.79□□□□□ -0.2
HLA-A-209ENST00000638375 MRPL16Q9NX20 251 aaKnown RBP13.79□□□□□ -0.2
HLA-A-209ENST00000638375 TRGV1A0A0A0MS02 117 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 GAGE12BA1L429 117 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 GAGE7O76087 117 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 GAGE12FP0CL80 117 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 GAGE12GP0CL81 117 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 GAGE12IP0CL82 117 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 S100A4P26447 101 aaKnown RBP13.78□□□□□ -0.2
HLA-A-209ENST00000638375 OR2D3Q8NGH3 330 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 MUC7Q8TAX7 377 aa13.78□□□□□ -0.2
HLA-A-209ENST00000638375 H3BVH4 76 aa13.77□□□□□ -0.21
HLA-A-209ENST00000638375 CXCL1P09341 107 aa13.77□□□□□ -0.21
HLA-A-209ENST00000638375 FAM231DQ6ZW35 169 aa13.77□□□□□ -0.21
HLA-A-209ENST00000638375 IL36BQ9NZH7 164 aa13.77□□□□□ -0.21
HLA-A-209ENST00000638375 M0R2P5 195 aa13.76□□□□□ -0.21
HLA-A-209ENST00000638375 ARMS2P0C7Q2 107 aa13.76□□□□□ -0.21
HLA-A-209ENST00000638375 ADIRFQ15847 76 aa13.76□□□□□ -0.21
HLA-A-209ENST00000638375 LGALS9BQ3B8N2 356 aa13.76□□□□□ -0.21
HLA-A-209ENST00000638375 ISOC2Q96AB3 205 aa13.76□□□□□ -0.21
HLA-A-209ENST00000638375 TMEM218A2RU14 115 aa13.75□□□□□ -0.21
HLA-A-209ENST00000638375 GZMBP10144 247 aa13.75□□□□□ -0.21
HLA-A-209ENST00000638375 ADCYAP1P18509 176 aa13.75□□□□□ -0.21
HLA-A-209ENST00000638375 RASL10AQ92737 203 aa13.75□□□□□ -0.21
HLA-A-209ENST00000638375 RPP21Q9H633 154 aaKnown RBP13.75□□□□□ -0.21
HLA-A-209ENST00000638375 SCRT2Q9NQ03 307 aa13.75□□□□□ -0.21
HLA-A-209ENST00000638375 ERVFC1-1P60608 527 aa13.74□□□□□ -0.21
HLA-A-209ENST00000638375 RPS20P60866 119 aaKnown RBP13.74□□□□□ -0.21
HLA-A-209ENST00000638375 PHLDA1Q8WV24 401 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms