RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 OR51G1Q8NGK1 321 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 CIRBP-AS1Q8TBR5 109 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 RAB2BQ8WUD1 216 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 C15orf40Q8WUR7 153 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 CHCHD10Q8WYQ3 142 aaPredicted RBP1.87□□□□□ -2.11
CDKL5-208ENST00000624953 AP3S1Q92572 193 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 FAM104AQ969W3 186 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TMEM230Q96A57 120 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 C16orf74Q96GX8 76 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 SLC35E1Q96K37 410 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 CNBD2Q96M20 576 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TP53RKQ96S44 253 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 LINC00467Q9BRT7 94 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 MND1Q9BWT6 205 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 DOK5Q9P104 306 aa1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TIMM8BQ9Y5J9 83 aaPredicted RBP1.87□□□□□ -2.11
CDKL5-208ENST00000624953 TRAV1-2A0A0B4J238 106 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 CCDC160A6NGH7 325 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ISLRO14498 428 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ARL6IP5O75915 188 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 RAB3BP20337 219 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 EIF2B2P49770 351 aaKnown RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 AQP4P55087 323 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 GNG2P59768 71 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ARPC4P59998 168 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 SUPT4H1P63272 117 aaKnown RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ERHP84090 104 aaKnown RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 MLLT11Q13015 90 aaPredicted RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 SAPCD1Q5SSQ6 148 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 Q6ZQT7 251 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ACOT7LQ6ZUV0 252 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 C11orf72Q8NBR9 251 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 LHFPL5Q8TAF8 219 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 RNASEH2CQ8TDP1 164 aaKnown RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 TMEM263Q8WUH6 116 aaKnown RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 S100ZQ8WXG8 99 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF2Q9BSG1 426 aaPredicted RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 TMEM208Q9BTX3 173 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 SRRQ9GZT4 340 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 ACOT13Q9NPJ3 140 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 RHBDL2Q9NX52 303 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 FKBP11Q9NYL4 201 aa1.86□□□□□ -2.11
CDKL5-208ENST00000624953 RSL24D1Q9UHA3 163 aaKnown RBP1.86□□□□□ -2.11
CDKL5-208ENST00000624953 FSIP2Q5CZC0 6907 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TRAV30A0A087WSZ9 112 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 PIGBOS1A0A0B4J2F0 54 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 E9PLD3 99 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 SMKR1H3BMG3 65 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 CORTO00230 105 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 GPR31O00270 319 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 PDCD5O14737 125 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 LECT2O14960 151 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 MPDU1O75352 247 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF324O75467 553 aaPredicted RBP1.85□□□□□ -2.11
CDKL5-208ENST00000624953 PTTG1O95997 202 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 IGLV2-8P01709 118 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 PMP2P02689 132 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 HTN1P15515 57 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 GPX4P36969 197 aaPredicted RBP1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TAS2R20P59543 309 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TAS2R60P59551 318 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TAL2Q16559 108 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 ATP6V1FQ16864 119 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 SP6Q3SY56 376 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 GCSAMLQ5JQS6 135 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 SPATA31B1PQ5VZV4 182 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 EBLN2Q6P2I7 272 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TMEM144Q7Z5S9 345 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 SLC35G3Q8N808 338 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 OR8A1Q8NGG7 326 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 COQ8AQ8NI60 647 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 Q8WTZ3 238 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 DNAJC30Q96LL9 226 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 LINC01587Q99440 93 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TSC22D3Q99576 134 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 MGLLQ99685 303 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 RSG1Q9BU20 258 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 CHAC1Q9BUX1 264 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 PBDC1Q9BVG4 233 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 CCDC90BQ9GZT6 254 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 DUSP21Q9H596 190 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 IFT46Q9NQC8 304 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 RPRMQ9NS64 109 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 NDUFB11Q9NX14 153 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 CCDC59Q9P031 241 aaKnown RBP1.85□□□□□ -2.11
CDKL5-208ENST00000624953 SSR3Q9UNL2 185 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 LY96Q9Y6Y9 160 aa1.85□□□□□ -2.11
CDKL5-208ENST00000624953 TRDV1A0A1B0GX56 115 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 ZNF98A6NK75 572 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 IBA57-AS1B1ANH7 110 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 SPINK4O60575 86 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 HSBP1O75506 76 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 IGHV3-53P01767 116 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 OR5AC1P0C628 307 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 SFTA3P0C7M3 94 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 SLC25A4P12235 298 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 CXCL3P19876 107 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 MYL9P24844 172 aa1.84□□□□□ -2.11
CDKL5-208ENST00000624953 PSMB9P28065 219 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms