RNA–Protein interactions for RNA: ENST00000622656.1

PCDHGC3-207, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 632 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-207ENST00000622656 ICOSQ9Y6W8 199 aa6.95□□□□□ -1.3
PCDHGC3-207ENST00000622656 SMLR1H3BR10 107 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 NXPH4O95158 308 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 TCRAP04437 139 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 LINC00315P59091 139 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 KRTAP10-2P60368 255 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 SUMO1P63165 101 aaKnown RBP6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 FAM74A1Q5RGS3 127 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 LYPD5Q6UWN5 251 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 DPPA3Q6W0C5 159 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 Q6ZRN7 208 aaPredicted RBP6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 LINC00479Q96M42 142 aa6.94□□□□□ -1.3
PCDHGC3-207ENST00000622656 TRGV11A0A075B6L2 103 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 TRAV34A0A0B4J273 112 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 TRAV21A0A0B4J279 112 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 TRGV4A0A0C4DH28 118 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 C16orf90A8MZG2 172 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 K7EQD1 137 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 FUSP35637 526 aaKnown RBP eCLIP6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 SERF2P84101 59 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 ARL6IP6Q8N6S5 226 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 C5orf17Q8NAS9 161 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 OR2T35Q8NGX2 323 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 SPXQ9BT56 116 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 EPDR1Q9UM22 224 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 PSG8Q9UQ74 426 aa6.93□□□□□ -1.3
PCDHGC3-207ENST00000622656 SIVA1O15304 175 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 CXorf1O96002 111 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 GYPEP15421 78 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 FGF8P55075 233 aaPredicted RBP6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 TTC32Q5I0X7 151 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 SPATA12Q7Z6I5 190 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 PRNTQ86SH4 94 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 WFDC10BQ8IUB3 73 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 IQCF2Q8IXL9 164 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 ACTR3CQ9C0K3 210 aaPredicted RBP6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 CYTL1Q9NRR1 136 aa6.92□□□□□ -1.3
PCDHGC3-207ENST00000622656 TRAV4A0A0B4J268 109 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 A0A1W2PPQ1 181 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 M0R2P5 195 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 GCGP01275 180 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 UBE2G2P60604 165 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 FLI1Q01543 452 aaPredicted RBP6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 MRPL23Q16540 153 aaKnown RBP6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 NEGR1Q7Z3B1 354 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 INO80EQ8NBZ0 244 aaPredicted RBP6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 OR4C5Q8NGB2 326 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 ASB13Q8WXK3 278 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 SDF2L1Q9HCN8 221 aa6.91□□□□□ -1.3
PCDHGC3-207ENST00000622656 IGHV3-73A0A0B4J1V6 119 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 PGPEP1LA6NFU8 196 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 C9JCJ5 164 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 ARPC5O15511 151 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 MBP02144 154 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 RNASE3P12724 160 aaKnown RBP6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 GATA1P15976 413 aaPredicted RBP6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 SLAQ13239 276 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 CYB561D1Q8N8Q1 229 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 C9orf85Q96MD7 179 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 TMEM167BQ9NRX6 74 aa6.9□□□□□ -1.3
PCDHGC3-207ENST00000622656 BORCS7-ASMTA0A0B4J1R7 106 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 IGKV3D-20A0A0C4DH25 116 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 CTXND1A0A1B0GTU2 59 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 SERTM2A0A1B0GWG4 89 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 A0A1W2PRE2 83 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 FAM74A7A6NL05 159 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 SRIP30626 198 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 FHITP49789 147 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 RGS21Q2M5E4 152 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 ZNF876PQ49A33 203 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 SMUG1Q53HV7 270 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 CFAP126Q5VTH2 177 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 OR11H4Q8NGC9 324 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 KCNS1Q96KK3 526 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 NDFIP1Q9BT67 221 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 ARL2-SNX15V9GYD0 113 aa6.89□□□□□ -1.31
PCDHGC3-207ENST00000622656 TAAR5O14804 337 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 RS1O15537 224 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 PFN1P07737 140 aaKnown RBP6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 DNAH10OSP0CZ25 163 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 BTF3P20290 206 aaKnown RBP6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 CRIP1P50238 77 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 ZNF506Q5JVG8 444 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 Q6ZSN1 163 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 SLC25A29Q8N8R3 303 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 JPT2Q9H910 190 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 Q9UF83 564 aa6.88□□□□□ -1.31
PCDHGC3-207ENST00000622656 K7EQM0 130 aa6.87□□□□□ -1.31
PCDHGC3-207ENST00000622656 PEX7O00628 323 aa6.87□□□□□ -1.31
PCDHGC3-207ENST00000622656 IFNA7P01567 189 aa6.87□□□□□ -1.31
PCDHGC3-207ENST00000622656 AKR1C8PQ5T2L2 129 aa6.87□□□□□ -1.31
PCDHGC3-207ENST00000622656 Q86TA4 180 aa6.87□□□□□ -1.31
PCDHGC3-207ENST00000622656 MAP1LC3B2A6NCE7 125 aa6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 FBLL1A6NHQ2 334 aaKnown RBP6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 CDK2AP2O75956 126 aa6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 ORM1P02763 201 aa6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 NHLRC2Q8NBF2 726 aa6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 PCNPQ8WW12 178 aaKnown RBP6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 ZC2HC1AQ96GY0 325 aa6.86□□□□□ -1.31
PCDHGC3-207ENST00000622656 SAMD10Q9BYL1 202 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms