RNA–Protein interactions for RNA: ENST00000622176.4

SLC6A6-209, Transcript of solute carrier family 6 member 6, humanhuman

TSL 1 (best)

Gene SLC6A6, Length 1,116 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A6-209ENST00000622176 C11orf45Q8TAV5 145 aa12.49□□□□□ -0.41
SLC6A6-209ENST00000622176 KCNS1Q96KK3 526 aa12.49□□□□□ -0.41
SLC6A6-209ENST00000622176 PARLQ9H300 379 aa12.49□□□□□ -0.41
SLC6A6-209ENST00000622176 CELA1Q9UNI1 258 aa12.49□□□□□ -0.41
SLC6A6-209ENST00000622176 TRGV11A0A075B6L2 103 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 TEX48A0A1B0GUV7 120 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 CXorf65A6NEN9 183 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 C9JCJ5 164 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 C9JQL5 133 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 SRSF3P84103 164 aaKnown RBP12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 FAM222AQ5U5X8 452 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 SDF2L1Q9HCN8 221 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 GSN-AS1Q9NRJ2 163 aa12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 TIMM8BQ9Y5J9 83 aaPredicted RBP12.48□□□□□ -0.41
SLC6A6-209ENST00000622176 LYRM9A8MSI8 78 aa12.47□□□□□ -0.41
SLC6A6-209ENST00000622176 TCL1AP56279 114 aa12.47□□□□□ -0.41
SLC6A6-209ENST00000622176 DAZ2Q13117 558 aaKnown RBP12.47□□□□□ -0.41
SLC6A6-209ENST00000622176 IGKV3D-20A0A0C4DH25 116 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 IGHV3-16A0A0C4DH30 117 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 SNURFLB1AK76 121 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 GNRH2O43555 120 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 TYMSP04818 313 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 CEBPGP53567 150 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 NANOS2P60321 138 aaKnown RBP12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 C12orf74Q32Q52 190 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 NOP10Q9NPE3 64 aaKnown RBP12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 MDFICQ9P1T7 246 aa12.46□□□□□ -0.41
SLC6A6-209ENST00000622176 PGPEP1LA6NFU8 196 aa12.45□□□□□ -0.42
SLC6A6-209ENST00000622176 ORM1P02763 201 aa12.45□□□□□ -0.42
SLC6A6-209ENST00000622176 ZNF415Q09FC8 603 aa12.45□□□□□ -0.42
SLC6A6-209ENST00000622176 MUC7Q8TAX7 377 aa12.45□□□□□ -0.42
SLC6A6-209ENST00000622176 KRBOX1C9JBD0 128 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 MGST1P10620 155 aaKnown RBP12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 LINC01559Q495D7 138 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 PRR27Q6MZM9 219 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 LINC00612Q8N6U2 182 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 OCC1Q8TAD7 63 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 SMIM7Q9BQ49 75 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 BIN3Q9NQY0 253 aa12.44□□□□□ -0.42
SLC6A6-209ENST00000622176 ZNF727A8MUV8 499 aa12.43□□□□□ -0.42
SLC6A6-209ENST00000622176 B4DEV8 164 aa12.43□□□□□ -0.42
SLC6A6-209ENST00000622176 ZNF575Q86XF7 245 aa12.43□□□□□ -0.42
SLC6A6-209ENST00000622176 LY96Q9Y6Y9 160 aa12.43□□□□□ -0.42
SLC6A6-209ENST00000622176 C19orf71A6NCJ1 209 aa12.42□□□□□ -0.42
SLC6A6-209ENST00000622176 M0R036 132 aa12.42□□□□□ -0.42
SLC6A6-209ENST00000622176 SPINK4O60575 86 aa12.42□□□□□ -0.42
SLC6A6-209ENST00000622176 FAM74A3Q4VXF1 159 aa12.42□□□□□ -0.42
SLC6A6-209ENST00000622176 DNLZQ5SXM8 178 aa12.42□□□□□ -0.42
SLC6A6-209ENST00000622176 SPXQ9BT56 116 aa12.42□□□□□ -0.42
SLC6A6-209ENST00000622176 K7EN84 100 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 DEFB130BP0DP73 79 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 DEFB130AP0DP74 79 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 DAD1P61803 113 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 OR5I1Q13606 314 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 LGALS9BQ3B8N2 356 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 Q6ZTC4 211 aa12.41□□□□□ -0.42
SLC6A6-209ENST00000622176 C3orf84H3BNL1 204 aa12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 CXCL1P09341 107 aa12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 RNASE3P12724 160 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 ASIPP42127 132 aa12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 Q6ZTI0 123 aa12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 DAZAP1Q96EP5 407 aaKnown RBP12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 C9orf85Q96MD7 179 aa12.4□□□□□ -0.42
SLC6A6-209ENST00000622176 DYNC2H1Q8NCM8 4307 aaKnown RBP12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 TRGV1A0A0A0MS02 117 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 GAGE12BA1L429 117 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 GAGE7O76087 117 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 GAGE12FP0CL80 117 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 GAGE12GP0CL81 117 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 GAGE12IP0CL82 117 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 SOHLH1Q5JUK2 328 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 LINC01551Q86U37 167 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 PHLDA1Q8WV24 401 aaPredicted RBP12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 C18orf15Q96N68 181 aa12.39□□□□□ -0.43
SLC6A6-209ENST00000622176 TMSB15BA0A087X1C1 80 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 GRIFINA4D1Z8 144 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 M0R2P5 195 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 S100A4P26447 101 aaKnown RBP12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 RPL19P84098 196 aaKnown RBP12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 TMEM241Q24JQ0 296 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 RASL10AQ92737 203 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 PTH2Q96A98 100 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 MRPL16Q9NX20 251 aaKnown RBP12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 IL36BQ9NZH7 164 aa12.38□□□□□ -0.43
SLC6A6-209ENST00000622176 TRAV10A0A0B4J240 114 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 LINC00862A6NCI5 91 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 P01737 135 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 ZFAND6Q6FIF0 208 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 CEMP1Q6PRD7 247 aaPredicted RBP12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 UQCC3Q6UW78 93 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 NUDT10Q8NFP7 164 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 NUDT11Q96G61 164 aa12.37□□□□□ -0.43
SLC6A6-209ENST00000622176 STARD9Q9P2P6 4700 aa12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 CSMD3Q7Z407 3707 aa12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 SFTA3P0C7M3 94 aa12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 MED14OSP0DP75 135 aa12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 RPS20P60866 119 aaKnown RBP12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 FAM231DQ6ZW35 169 aa12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 OR2D3Q8NGH3 330 aa12.36□□□□□ -0.43
SLC6A6-209ENST00000622176 RNASE7Q9H1E1 156 aaKnown RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms