RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 VPREB3Q9UKI3 123 aa13.34□□□□□ -0.27
FAM3A-222ENST00000621967 U3KQE9 123 aa13.34□□□□□ -0.27
FAM3A-222ENST00000621967 HBDP02042 147 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 COX8AP10176 69 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 LGALS9BQ3B8N2 356 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 LGALS9CQ6DKI2 356 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 CUBNO60494 3623 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 TRAV8-2A0A0B4J237 113 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 A6NDX4 124 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 LINC01546A6NGU7 62 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 CRIP2P52943 208 aaPredicted RBP13.33□□□□□ -0.28
FAM3A-222ENST00000621967 BVES-AS1Q5T3Y7 98 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 TMEM86BQ8N661 226 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 DUX5Q96PT3 197 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 MOB4Q9Y3A3 225 aa13.33□□□□□ -0.28
FAM3A-222ENST00000621967 SMKR1H3BMG3 65 aa13.32□□□□□ -0.28
FAM3A-222ENST00000621967 PPBPP02775 128 aa13.32□□□□□ -0.28
FAM3A-222ENST00000621967 Q6ZVH6 145 aa13.32□□□□□ -0.28
FAM3A-222ENST00000621967 METTL26Q96S19 204 aa13.32□□□□□ -0.28
FAM3A-222ENST00000621967 MSRB1Q9NZV6 116 aa13.32□□□□□ -0.28
FAM3A-222ENST00000621967 DNAJC9-AS1A6NH13 148 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 NUDT3O95989 172 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 HIST1H1AQ02539 215 aaPredicted RBP13.31□□□□□ -0.28
FAM3A-222ENST00000621967 C12orf54Q6X4T0 127 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 OR8A1Q8NGG7 326 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 AGPAT4-IT1Q9H0P7 198 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 IGHV3-66A0A0C4DH42 116 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 TCF21O43680 179 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 JMJD8Q96S16 334 aa13.31□□□□□ -0.28
FAM3A-222ENST00000621967 C8orf86Q6ZUL3 223 aa13.3□□□□□ -0.28
FAM3A-222ENST00000621967 PPP1R14DQ9NXH3 145 aa13.3□□□□□ -0.28
FAM3A-222ENST00000621967 IGKV3D-20A0A0C4DH25 116 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 CCL25O15444 150 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 HILS1P60008 231 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 ATP5G2Q06055 141 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 C9orf47Q6ZRZ4 202 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 C2orf91Q6ZV80 131 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 TRAV41A0A0B4J266 112 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 FAM223BA6NKX1 122 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 UBE2V1Q13404 147 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 FAM223AQ8IWN6 122 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 DEFB125Q8N687 156 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 OR1N2Q8NGR9 330 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 MAP1LC3AQ9H492 121 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 ESM1Q9NQ30 184 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 C11orf21Q9P2W6 132 aa13.29□□□□□ -0.28
FAM3A-222ENST00000621967 IGHV3OR16-13A0A075B7E8 117 aa13.28□□□□□ -0.28
FAM3A-222ENST00000621967 IGHV3-74A0A0B4J1X5 117 aa13.28□□□□□ -0.28
FAM3A-222ENST00000621967 FGF6P10767 208 aa13.28□□□□□ -0.28
FAM3A-222ENST00000621967 IFI27L1Q96BM0 104 aa13.28□□□□□ -0.28
FAM3A-222ENST00000621967 TAX1BP3O14907 124 aa13.27□□□□□ -0.28
FAM3A-222ENST00000621967 PTTG1IPP53801 180 aa13.27□□□□□ -0.28
FAM3A-222ENST00000621967 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.28
FAM3A-222ENST00000621967 TMEM78Q5T7P6 136 aa13.27□□□□□ -0.28
FAM3A-222ENST00000621967 ZNF207O43670 478 aaKnown RBP13.27□□□□□ -0.29
FAM3A-222ENST00000621967 FXYD7P58549 80 aa13.27□□□□□ -0.29
FAM3A-222ENST00000621967 CACNG7P62955 275 aa13.27□□□□□ -0.29
FAM3A-222ENST00000621967 GLMPQ8WWB7 406 aa13.27□□□□□ -0.29
FAM3A-222ENST00000621967 NIPBLQ6KC79 2804 aaeCLIP13.27□□□□□ -0.29
FAM3A-222ENST00000621967 IGHV3-49A0A0A0MS15 119 aa13.26□□□□□ -0.29
FAM3A-222ENST00000621967 GAS8-AS1O95177 125 aa13.26□□□□□ -0.29
FAM3A-222ENST00000621967 NXT2Q9NPJ8 142 aaKnown RBP13.26□□□□□ -0.29
FAM3A-222ENST00000621967 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
FAM3A-222ENST00000621967 TNFRSF6BO95407 300 aa13.25□□□□□ -0.29
FAM3A-222ENST00000621967 RNASE1P07998 156 aaKnown RBP13.25□□□□□ -0.29
FAM3A-222ENST00000621967 PPIFP30405 207 aaKnown RBP13.25□□□□□ -0.29
FAM3A-222ENST00000621967 FOXE3Q13461 319 aa13.24□□□□□ -0.29
FAM3A-222ENST00000621967 IGHV4-4A0A075B6R2 117 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 BRI3O95415 125 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 TRGV3P03979 118 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 IGF1P05019 195 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 FCER1GP30273 86 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 BOD1L2Q8IYS8 172 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 LENEPQ9Y5L5 61 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 SNAI2O43623 268 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 ARL3P36405 182 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 BLCAPP62952 87 aa13.23□□□□□ -0.29
FAM3A-222ENST00000621967 IGLV2-18A0A075B6J9 118 aa13.22□□□□□ -0.29
FAM3A-222ENST00000621967 PRSS47A8MTI9 375 aa13.22□□□□□ -0.29
FAM3A-222ENST00000621967 C16orf92Q96LL3 132 aa13.22□□□□□ -0.29
FAM3A-222ENST00000621967 LINC00527Q9UJ94 153 aa13.22□□□□□ -0.29
FAM3A-222ENST00000621967 Q8N8P6 123 aa13.21□□□□□ -0.29
FAM3A-222ENST00000621967 JMJD1CQ15652 2540 aa13.21□□□□□ -0.3
FAM3A-222ENST00000621967 NDUFA4O00483 81 aa13.21□□□□□ -0.3
FAM3A-222ENST00000621967 GATA1P15976 413 aaPredicted RBP13.21□□□□□ -0.3
FAM3A-222ENST00000621967 EVI2AP22794 236 aa13.21□□□□□ -0.3
FAM3A-222ENST00000621967 LEPP41159 167 aa13.21□□□□□ -0.3
FAM3A-222ENST00000621967 GPHB5Q86YW7 130 aa13.21□□□□□ -0.3
FAM3A-222ENST00000621967 C20orf173Q96LM9 149 aa13.21□□□□□ -0.3
FAM3A-222ENST00000621967 H3BUA1 57 aa13.2□□□□□ -0.3
FAM3A-222ENST00000621967 ZMAT4Q9H898 229 aa13.2□□□□□ -0.3
FAM3A-222ENST00000621967 NF1P21359 2839 aa13.2□□□□□ -0.3
FAM3A-222ENST00000621967 SOCS3O14543 225 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 SIVA1O15304 175 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 TRBV12-3P01733 135 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 IGHG2P01859 326 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 SEC11AP67812 179 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 TMEM97Q5BJF2 176 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 PRR9Q5T870 116 aa13.19□□□□□ -0.3
FAM3A-222ENST00000621967 UNQ9165/PRO28630Q6UXU0 137 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms