RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 PEA15Q15121 130 aa9.76□□□□□ -0.85
NEK3-210ENST00000620675 EIF4E3Q8N5X7 224 aaKnown RBP9.76□□□□□ -0.85
NEK3-210ENST00000620675 SMIM7Q9BQ49 75 aa9.76□□□□□ -0.85
NEK3-210ENST00000620675 GSN-AS1Q9NRJ2 163 aa9.76□□□□□ -0.85
NEK3-210ENST00000620675 TYMSP04818 313 aa9.75□□□□□ -0.85
NEK3-210ENST00000620675 PLECQ15149 4684 aaKnown RBP9.75□□□□□ -0.85
NEK3-210ENST00000620675 FAM162BQ5T6X4 162 aa9.75□□□□□ -0.85
NEK3-210ENST00000620675 LYSTQ99698 3801 aa9.75□□□□□ -0.85
NEK3-210ENST00000620675 TMSB15BA0A087X1C1 80 aa9.75□□□□□ -0.85
NEK3-210ENST00000620675 FABP5P3A8MUU1 101 aa9.75□□□□□ -0.85
NEK3-210ENST00000620675 FAM159AQ6UWV7 190 aa9.75□□□□□ -0.85
NEK3-210ENST00000620675 TMEM263Q8WUH6 116 aaKnown RBP9.75□□□□□ -0.85
NEK3-210ENST00000620675 C11orf68Q9H3H3 251 aaKnown RBP9.75□□□□□ -0.85
NEK3-210ENST00000620675 ZNF727A8MUV8 499 aa9.74□□□□□ -0.85
NEK3-210ENST00000620675 C9JCJ5 164 aa9.74□□□□□ -0.85
NEK3-210ENST00000620675 TDRG1Q3Y452 100 aa9.74□□□□□ -0.85
NEK3-210ENST00000620675 FAM222AQ5U5X8 452 aa9.74□□□□□ -0.85
NEK3-210ENST00000620675 LINC00467Q9BRT7 94 aa9.74□□□□□ -0.85
NEK3-210ENST00000620675 NOP10Q9NPE3 64 aaKnown RBP9.74□□□□□ -0.85
NEK3-210ENST00000620675 ORM1P02763 201 aa9.73□□□□□ -0.85
NEK3-210ENST00000620675 NANOS2P60321 138 aaKnown RBP9.73□□□□□ -0.85
NEK3-210ENST00000620675 COMMD7Q86VX2 200 aa9.73□□□□□ -0.85
NEK3-210ENST00000620675 GRIFINA4D1Z8 144 aa9.73□□□□□ -0.85
NEK3-210ENST00000620675 NDUFS6O75380 124 aaKnown RBP9.73□□□□□ -0.85
NEK3-210ENST00000620675 IL17DQ8TAD2 202 aa9.73□□□□□ -0.85
NEK3-210ENST00000620675 C16orf74Q96GX8 76 aa9.73□□□□□ -0.85
NEK3-210ENST00000620675 RNASE7Q9H1E1 156 aaKnown RBP9.73□□□□□ -0.85
NEK3-210ENST00000620675 DKK2Q9UBU2 259 aa9.73□□□□□ -0.85
NEK3-210ENST00000620675 IGHV3-16A0A0C4DH30 117 aa9.72□□□□□ -0.85
NEK3-210ENST00000620675 LINC00862A6NCI5 91 aa9.72□□□□□ -0.85
NEK3-210ENST00000620675 C19orf71A6NCJ1 209 aa9.72□□□□□ -0.85
NEK3-210ENST00000620675 B4DEV8 164 aa9.72□□□□□ -0.85
NEK3-210ENST00000620675 KRBOX1C9JBD0 128 aa9.72□□□□□ -0.85
NEK3-210ENST00000620675 SFTA3P0C7M3 94 aa9.72□□□□□ -0.85
NEK3-210ENST00000620675 LINC01551Q86U37 167 aa9.71□□□□□ -0.85
NEK3-210ENST00000620675 SMDT1Q9H4I9 107 aa9.71□□□□□ -0.85
NEK3-210ENST00000620675 GZMBP10144 247 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 RNASE3P12724 160 aaKnown RBP9.71□□□□□ -0.86
NEK3-210ENST00000620675 C12orf74Q32Q52 190 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 LINC01559Q495D7 138 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 SOHLH1Q5JUK2 328 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 ZNF493Q6ZR52 646 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 Q6ZTI0 123 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 SDF2L1Q9HCN8 221 aa9.71□□□□□ -0.86
NEK3-210ENST00000620675 ADCYAP1P18509 176 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 TCL1AP56279 114 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 NUDT10Q8NFP7 164 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 NUDT11Q96G61 164 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 TIMM8BQ9Y5J9 83 aaPredicted RBP9.7□□□□□ -0.86
NEK3-210ENST00000620675 DEFB130BP0DP73 79 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 DEFB130AP0DP74 79 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 RPL23P62829 140 aaKnown RBP9.7□□□□□ -0.86
NEK3-210ENST00000620675 Q6ZTC4 211 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 C11orf45Q8TAV5 145 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 SMIM12Q96EX1 92 aa9.7□□□□□ -0.86
NEK3-210ENST00000620675 MRPL16Q9NX20 251 aaKnown RBP9.7□□□□□ -0.86
NEK3-210ENST00000620675 SNURFLB1AK76 121 aa9.69□□□□□ -0.86
NEK3-210ENST00000620675 IBA57Q5T440 356 aaKnown RBP9.69□□□□□ -0.86
NEK3-210ENST00000620675 KCNS1Q96KK3 526 aa9.69□□□□□ -0.86
NEK3-210ENST00000620675 TRGV11A0A075B6L2 103 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 TMEM189A5PLL7 270 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 CXorf65A6NEN9 183 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 H3BVH4 76 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 ZNF415Q09FC8 603 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 TMEM241Q24JQ0 296 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 GAGE12BA1L429 117 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 GAGE7O76087 117 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 GAGE12FP0CL80 117 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 GAGE12GP0CL81 117 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 GAGE12IP0CL82 117 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 SPART-AS1P0CW21 52 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 DAZ2Q13117 558 aaKnown RBP9.68□□□□□ -0.86
NEK3-210ENST00000620675 C9orf85Q96MD7 179 aa9.68□□□□□ -0.86
NEK3-210ENST00000620675 TRGV1A0A0A0MS02 117 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 MUC21A0A0G2JKD1 596 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 MUC21A0A140T8X8 626 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 SPINK4O60575 86 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 ADIRFQ15847 76 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 OR2D3Q8NGH3 330 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 WWC2-AS2Q96NR7 200 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 NAT8Q9UHE5 227 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 LY96Q9Y6Y9 160 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 P01737 135 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 ARMS2P0C7Q2 107 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 FAM74A3Q4VXF1 159 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 ISOC2Q96AB3 205 aa9.67□□□□□ -0.86
NEK3-210ENST00000620675 DAZAP1Q96EP5 407 aaKnown RBP9.67□□□□□ -0.86
NEK3-210ENST00000620675 ASIPP42127 132 aa9.66□□□□□ -0.86
NEK3-210ENST00000620675 ZFAND6Q6FIF0 208 aa9.66□□□□□ -0.86
NEK3-210ENST00000620675 UQCC3Q6UW78 93 aa9.66□□□□□ -0.86
NEK3-210ENST00000620675 LINC00612Q8N6U2 182 aa9.66□□□□□ -0.86
NEK3-210ENST00000620675 S100A4P26447 101 aaKnown RBP9.65□□□□□ -0.86
NEK3-210ENST00000620675 ERVFC1-1P60608 527 aa9.65□□□□□ -0.86
NEK3-210ENST00000620675 SSTP61278 116 aa9.65□□□□□ -0.86
NEK3-210ENST00000620675 DAD1P61803 113 aa9.65□□□□□ -0.86
NEK3-210ENST00000620675 SLC7A5P1Q8MH63 180 aa9.65□□□□□ -0.86
NEK3-210ENST00000620675 POM121L12Q8N7R1 296 aa9.65□□□□□ -0.87
NEK3-210ENST00000620675 HTN3P15516 51 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms