RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 CD7P09564 240 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 NDUFV3P56181 108 aaKnown RBP6.41□□□□□ -1.38
GPC6-202ENST00000617456 LINC00310P59036 64 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 MUC21Q5SSG8 566 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 KCNIP4Q6PIL6 250 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 RPP25LQ8N5L8 163 aaKnown RBP6.41□□□□□ -1.38
GPC6-202ENST00000617456 OR10G7Q8NGN6 311 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 EEF1AKMT3Q96AZ1 226 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 FANCD2OSQ96PS1 177 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 MS4A6AQ9H2W1 248 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 CCL28Q9NRJ3 127 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 TP53TG3Q9ULZ0 132 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 YTHDF2Q9Y5A9 579 aaKnown RBP6.41□□□□□ -1.38
GPC6-202ENST00000617456 DNAH10Q8IVF4 4471 aa6.41□□□□□ -1.38
GPC6-202ENST00000617456 IGLV11-55A0A075B6I3 123 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 C9JAW5 83 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 FAM90A26D6RGX4 464 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 TMEM262E9PQX1 116 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 FNDC10F2Z333 226 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 UPK2O00526 184 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 DEFA4P12838 97 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 PRSS3P35030 304 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 HSPE1P61604 102 aaKnown RBP6.4□□□□□ -1.38
GPC6-202ENST00000617456 DEFB114Q30KQ6 69 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 CYP2G1PQ6ZSU1 146 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 VKORC1L1Q8N0U8 176 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 GVQW1Q8N7I0 195 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 DYNLRB2Q8TF09 96 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 HIGD1AQ9Y241 93 aa6.4□□□□□ -1.38
GPC6-202ENST00000617456 RYR1P21817 5038 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 LOC102723971A0A1B0GUV8 181 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 C2orf70A6NJV1 201 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 E7EUB6 86 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 CCDC179H3BU77 68 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 DEDDO75618 318 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 MYOD1P15172 320 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 RPL7P18124 248 aaKnown RBP6.39□□□□□ -1.39
GPC6-202ENST00000617456 EDN2P20800 178 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 GALR1P47211 349 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 HERV-K104P61576 105 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 OR10J3Q5JRS4 329 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 SLC25A34Q6PIV7 304 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 FAM159AQ6UWV7 190 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 ZNF818PQ6ZRF7 136 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 LINC00336Q6ZUF6 198 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 SEC22AQ96IW7 307 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 C2orf50Q96LR7 162 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 VGLL1Q99990 258 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 SPCS1Q9Y6A9 102 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 SELENOKQ9Y6D0 94 aa6.39□□□□□ -1.39
GPC6-202ENST00000617456 NUPR2A6NF83 97 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 ZNF785A8K8V0 405 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 HSBP1O75506 76 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 PGLYRP1O75594 196 aaPredicted RBP6.38□□□□□ -1.39
GPC6-202ENST00000617456 PRH1P02810 166 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 APELAP0DMC3 54 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 FABP2P12104 132 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 CBLN1P23435 193 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 ERVK-16P61578 105 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 ID3Q02535 119 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 C10orf55Q5SWW7 151 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 OR1L8Q8NGR8 309 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 C20orf173Q96LM9 149 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 CCDC140Q96MF4 163 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 LINC01587Q99440 93 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 RARRES2Q99969 163 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 OVOL2Q9BRP0 275 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 MLST8Q9BVC4 326 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 SH3BGRL3Q9H299 93 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 NRN1Q9NPD7 142 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 NDUFA4L2Q9NRX3 87 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 PRNDQ9UKY0 176 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 TRAPPC1Q9Y5R8 145 aa6.38□□□□□ -1.39
GPC6-202ENST00000617456 HECTD4Q9Y4D8 3996 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 A0A0J9YWU9 116 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 CGB1A6NKQ9 187 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 K7EMT4 169 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 CRXO43186 299 aaPredicted RBP6.37□□□□□ -1.39
GPC6-202ENST00000617456 TNFSF12O43508 249 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 IFITM1P13164 125 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 XGP55808 180 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 LRRC37A5PQ49AS3 106 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 RNASE12Q5GAN4 147 aaKnown RBP6.37□□□□□ -1.39
GPC6-202ENST00000617456 CEMP1Q6PRD7 247 aaPredicted RBP6.37□□□□□ -1.39
GPC6-202ENST00000617456 RASL10AQ92737 203 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 LSM10Q969L4 123 aaKnown RBP6.37□□□□□ -1.39
GPC6-202ENST00000617456 PRADC1Q9BSG0 188 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 C5orf66Q9H5L9 145 aa6.37□□□□□ -1.39
GPC6-202ENST00000617456 TEX50A0A1B0GTY4 177 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 INS-IGF2F8WCM5 200 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 K7EN84 100 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 MT-ATP8P03928 68 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 C3orf79P0CE67 100 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 RPL12P30050 165 aaKnown RBP6.36□□□□□ -1.39
GPC6-202ENST00000617456 FXYD4P59646 89 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 ZNF415Q09FC8 603 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 MEIG1Q5JSS6 88 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 CLEC19AQ6UXS0 136 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 ZNF114Q8NC26 417 aa6.36□□□□□ -1.39
GPC6-202ENST00000617456 BAALCQ8WXS3 180 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms