RNA–Protein interactions for RNA: ENST00000611689.4

GRIA3-205, Transcript of glutamate ionotropic receptor AMPA type subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GRIA3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA3-205ENST00000611689 PRR27Q6MZM9 219 aa11.14□□□□□ -0.63
GRIA3-205ENST00000611689 IGKV3D-20A0A0C4DH25 116 aa11.13□□□□□ -0.63
GRIA3-205ENST00000611689 LINC00862A6NCI5 91 aa11.13□□□□□ -0.63
GRIA3-205ENST00000611689 FAM74A3Q4VXF1 159 aa11.13□□□□□ -0.63
GRIA3-205ENST00000611689 C11orf72Q8NBR9 251 aa11.13□□□□□ -0.63
GRIA3-205ENST00000611689 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 K7EN84 100 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 ORM1P02763 201 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 TYMSP04818 313 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 IBA57Q5T440 356 aaKnown RBP11.12□□□□□ -0.63
GRIA3-205ENST00000611689 SDF2L1Q9HCN8 221 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 BIN3Q9NQY0 253 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 GSN-AS1Q9NRJ2 163 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 MDFICQ9P1T7 246 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 LY96Q9Y6Y9 160 aa11.12□□□□□ -0.63
GRIA3-205ENST00000611689 TGP01266 2768 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 TRGV11A0A075B6L2 103 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 M0R036 132 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 OR5I1Q13606 314 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 LINC01559Q495D7 138 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 SOHLH1Q5JUK2 328 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 UQCC3Q6UW78 93 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 COMMD7Q86VX2 200 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 DKK2Q9UBU2 259 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 CELA1Q9UNI1 258 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 TIMM8BQ9Y5J9 83 aaPredicted RBP11.11□□□□□ -0.63
GRIA3-205ENST00000611689 STAB2Q8WWQ8 2551 aa11.11□□□□□ -0.63
GRIA3-205ENST00000611689 IGHV3-16A0A0C4DH30 117 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 C19orf71A6NCJ1 209 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 CXorf65A6NEN9 183 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 SNURFLB1AK76 121 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 B4DEV8 164 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 SFTA3P0C7M3 94 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 SPART-AS1P0CW21 52 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 TCL1AP56279 114 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 ZNF415Q09FC8 603 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 TMEM241Q24JQ0 296 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 FAM222AQ5U5X8 452 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 ZNF575Q86XF7 245 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 IL17DQ8TAD2 202 aa11.1□□□□□ -0.63
GRIA3-205ENST00000611689 NOP10Q9NPE3 64 aaKnown RBP11.1□□□□□ -0.63
GRIA3-205ENST00000611689 LYRM9A8MSI8 78 aa11.09□□□□□ -0.63
GRIA3-205ENST00000611689 DAZ2Q13117 558 aaKnown RBP11.09□□□□□ -0.63
GRIA3-205ENST00000611689 LINC01551Q86U37 167 aa11.09□□□□□ -0.63
GRIA3-205ENST00000611689 C11orf45Q8TAV5 145 aa11.09□□□□□ -0.63
GRIA3-205ENST00000611689 DAZAP1Q96EP5 407 aaKnown RBP11.09□□□□□ -0.63
GRIA3-205ENST00000611689 NAT8Q9UHE5 227 aa11.09□□□□□ -0.63
GRIA3-205ENST00000611689 TMSB15BA0A087X1C1 80 aa11.08□□□□□ -0.64
GRIA3-205ENST00000611689 RPL19P84098 196 aaKnown RBP11.08□□□□□ -0.64
GRIA3-205ENST00000611689 NUDT10Q8NFP7 164 aa11.08□□□□□ -0.64
GRIA3-205ENST00000611689 NUDT11Q96G61 164 aa11.08□□□□□ -0.64
GRIA3-205ENST00000611689 WWC2-AS2Q96NR7 200 aa11.08□□□□□ -0.64
GRIA3-205ENST00000611689 SPXQ9BT56 116 aa11.08□□□□□ -0.64
GRIA3-205ENST00000611689 TEX48A0A1B0GUV7 120 aa11.07□□□□□ -0.64
GRIA3-205ENST00000611689 GRIFINA4D1Z8 144 aa11.07□□□□□ -0.64
GRIA3-205ENST00000611689 P01737 135 aa11.07□□□□□ -0.64
GRIA3-205ENST00000611689 ASIPP42127 132 aa11.07□□□□□ -0.64
GRIA3-205ENST00000611689 NANOS2P60321 138 aaKnown RBP11.07□□□□□ -0.64
GRIA3-205ENST00000611689 RPL23P62829 140 aaKnown RBP11.07□□□□□ -0.64
GRIA3-205ENST00000611689 C12orf74Q32Q52 190 aa11.07□□□□□ -0.64
GRIA3-205ENST00000611689 DNLZQ5SXM8 178 aa11.07□□□□□ -0.64
GRIA3-205ENST00000611689 RNASE7Q9H1E1 156 aaKnown RBP11.07□□□□□ -0.64
GRIA3-205ENST00000611689 SPINK4O60575 86 aa11.06□□□□□ -0.64
GRIA3-205ENST00000611689 RNASE3P12724 160 aaKnown RBP11.06□□□□□ -0.64
GRIA3-205ENST00000611689 FAM231DQ6ZW35 169 aa11.06□□□□□ -0.64
GRIA3-205ENST00000611689 LINC00612Q8N6U2 182 aa11.06□□□□□ -0.64
GRIA3-205ENST00000611689 OR2D3Q8NGH3 330 aa11.06□□□□□ -0.64
GRIA3-205ENST00000611689 C9orf85Q96MD7 179 aa11.06□□□□□ -0.64
GRIA3-205ENST00000611689 TMEM218A2RU14 115 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 CXCL1P09341 107 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 DEFB130BP0DP73 79 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 DEFB130AP0DP74 79 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 S100A4P26447 101 aaKnown RBP11.05□□□□□ -0.64
GRIA3-205ENST00000611689 DAD1P61803 113 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 Q6ZTI0 123 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 ISOC2Q96AB3 205 aa11.05□□□□□ -0.64
GRIA3-205ENST00000611689 TRGV1A0A0A0MS02 117 aa11.04□□□□□ -0.64
GRIA3-205ENST00000611689 ARMS2P0C7Q2 107 aa11.04□□□□□ -0.64
GRIA3-205ENST00000611689 ERVFC1-1P60608 527 aa11.04□□□□□ -0.64
GRIA3-205ENST00000611689 RPS20P60866 119 aaKnown RBP11.04□□□□□ -0.64
GRIA3-205ENST00000611689 ADIRFQ15847 76 aa11.04□□□□□ -0.64
GRIA3-205ENST00000611689 LGALS9BQ3B8N2 356 aa11.04□□□□□ -0.64
GRIA3-205ENST00000611689 MRPL16Q9NX20 251 aaKnown RBP11.04□□□□□ -0.64
GRIA3-205ENST00000611689 IL36BQ9NZH7 164 aa11.04□□□□□ -0.64
GRIA3-205ENST00000611689 GAGE12BA1L429 117 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 H3BVH4 76 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 M0R2P5 195 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 GATCO43716 136 aaKnown RBP11.03□□□□□ -0.64
GRIA3-205ENST00000611689 GAGE7O76087 117 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 GAGE12FP0CL80 117 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 GAGE12GP0CL81 117 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 GAGE12IP0CL82 117 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 Q6ZTC4 211 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 RPP21Q9H633 154 aaKnown RBP11.03□□□□□ -0.64
GRIA3-205ENST00000611689 SCRT2Q9NQ03 307 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 OSTCQ9NRP0 149 aa11.03□□□□□ -0.64
GRIA3-205ENST00000611689 MED14OSP0DP75 135 aa11.02□□□□□ -0.65
GRIA3-205ENST00000611689 GZMBP10144 247 aa11.02□□□□□ -0.65
GRIA3-205ENST00000611689 ADCYAP1P18509 176 aa11.02□□□□□ -0.65
GRIA3-205ENST00000611689 RASL10AQ92737 203 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms