RNA–Protein interactions for RNA: ENST00000611457.4

CBWD1-219, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 3,324 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-219ENST00000611457 SSBP4Q9BWG4 385 aaPredicted RBP5.34□□□□□ -1.55
CBWD1-219ENST00000611457 PLEKHA3Q9HB20 300 aa5.34□□□□□ -1.55
CBWD1-219ENST00000611457 SCRT2Q9NQ03 307 aa5.34□□□□□ -1.55
CBWD1-219ENST00000611457 ZNF207O43670 478 aaKnown RBP5.33□□□□□ -1.56
CBWD1-219ENST00000611457 GATA2P23769 480 aaPredicted RBP5.33□□□□□ -1.56
CBWD1-219ENST00000611457 CD69Q07108 199 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 SMAGPQ0VAQ4 97 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 C15orf32Q32M92 178 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 NPVFQ9HCQ7 196 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 C21orf62Q9NYP8 219 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 HSPB8Q9UJY1 196 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 IGKV1D-37A0A075B6S9 117 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 TEX48A0A1B0GUV7 120 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 H3BUT2 72 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 ERHP84090 104 aaKnown RBP5.33□□□□□ -1.56
CBWD1-219ENST00000611457 HSD52Q0P140 79 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 FA2HQ7L5A8 372 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 APRG1Q8IVJ8 170 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 PTH2Q96A98 100 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 PRR25Q96S07 402 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 IGHV3-72A0A0B4J1Y9 119 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 CHEK1O14757 476 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 OR2J3O76001 311 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 FABP2P12104 132 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 ARL3P36405 182 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 MIC13Q5XKP0 118 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 GTSF1LQ9H1H1 148 aa5.33□□□□□ -1.56
CBWD1-219ENST00000611457 HEYLQ9NQ87 328 aaPredicted RBP5.33□□□□□ -1.56
CBWD1-219ENST00000611457 K7EQG2 157 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 MRPS12O15235 138 aaKnown RBP5.32□□□□□ -1.56
CBWD1-219ENST00000611457 COX8AP10176 69 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 CKS1BP61024 79 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 PRB3Q04118 309 aaPredicted RBP5.32□□□□□ -1.56
CBWD1-219ENST00000611457 NSUN5P1Q3KNT7 163 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 ATP5L2Q7Z4Y8 100 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 GGTLC1Q9BX51 225 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 SPCS1Q9Y6A9 102 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 SMAD5-AS1Q9Y6J3 95 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 VPS13DQ5THJ4 4388 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 SMIM9A6NGZ8 99 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 CD24P25063 80 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 PRR20EP86478 221 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 PRR20CP86479 221 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 PRR20DP86480 221 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 PRR20BP86481 221 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 PRR20AP86496 221 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 CD300EQ496F6 205 aaPredicted RBP5.32□□□□□ -1.56
CBWD1-219ENST00000611457 TMEM14CQ9P0S9 112 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 U3KQK5 164 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 FRAS1Q86XX4 4008 aa5.32□□□□□ -1.56
CBWD1-219ENST00000611457 TAS2R45P59539 299 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 TEPPQ6URK8 271 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 LINC00612Q8N6U2 182 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 RNF183Q96D59 192 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 TRAV3A0A0B4J244 114 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 CAMPP49913 170 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 SLURP1P55000 103 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 FAM231DQ6ZW35 169 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 MRAPQ8TCY5 172 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 DCANP1Q8TF63 244 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 FAM19A4Q96LR4 140 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 MGST2Q99735 147 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 ACANP16112 2415 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 IGKV1-17P01599 117 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 LTC4SQ16873 150 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 SPINK9Q5DT21 86 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 SPATA12Q7Z6I5 190 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 TRPT1Q86TN4 253 aaKnown RBP5.31□□□□□ -1.56
CBWD1-219ENST00000611457 OR4A16Q8NH70 328 aa5.31□□□□□ -1.56
CBWD1-219ENST00000611457 NOTCH2Q04721 2471 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 GAGE12HA6NDE8 117 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 CSNK1G2-AS1Q8NCQ2 148 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 IGHV1-24A0A0C4DH33 117 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 A0A1W2PPM0 123 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 TMEM189A5PLL7 270 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 STPG3Q8N7X2 389 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 NUP35Q8NFH5 326 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 IGF2BP2-AS1Q96M15 143 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 ZNF355PQ9NSJ1 428 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 A0A1W2PRE2 83 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 A6NJY4 79 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 H0Y8G0 127 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 K7EQM0 130 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 KIR3DS1Q14943 382 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 ECSCRQ19T08 205 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 NHLRC2Q8NBF2 726 aa5.3□□□□□ -1.56
CBWD1-219ENST00000611457 MRPL32Q9BYC8 188 aaKnown RBP5.3□□□□□ -1.56
CBWD1-219ENST00000611457 CNIH1O95406 144 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 CRYBA4P53673 196 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 APOC4P55056 127 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 HBBP68871 147 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 PLGLAQ15195 96 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 MRAP2Q96G30 205 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 TP73-AS1Q9UF72 201 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 CA1P00915 261 aaPredicted RBP5.29□□□□□ -1.56
CBWD1-219ENST00000611457 COX8CQ7Z4L0 72 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 ZNF329Q86UD4 541 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 GATD1Q8NB37 220 aa5.29□□□□□ -1.56
CBWD1-219ENST00000611457 RYR2Q92736 4967 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms