RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 NUTF2P61970 127 aaKnown RBP3.78□□□□□ -1.8
VRK3-226ENST00000602029 UBE2G1P62253 170 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 PDE6HQ13956 83 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 USF2Q15853 346 aaPredicted RBP3.78□□□□□ -1.8
VRK3-226ENST00000602029 TMEM183BQ1AE95 376 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 PSMG4Q5JS54 123 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 C1orf194Q5T5A4 169 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 Q6AWC8 147 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 MORN3Q6PF18 240 aaPredicted RBP3.78□□□□□ -1.8
VRK3-226ENST00000602029 MIR17HGQ75NE6 70 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 OR4B1Q8NGF8 309 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 CMTM2Q8TAZ6 248 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 TMEM37Q8WXS4 190 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 FAM167A-AS1Q96KT0 104 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 C20orf144Q9BQM9 153 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 ATG101Q9BSB4 218 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 C2orf88Q9BSF0 95 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 PAXXQ9BUH6 204 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 SLC25A2Q9BXI2 301 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 MRPL18Q9H0U6 180 aaKnown RBP3.78□□□□□ -1.8
VRK3-226ENST00000602029 ZFAND3Q9H8U3 227 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 NAT8BQ9UHF3 227 aa3.78□□□□□ -1.8
VRK3-226ENST00000602029 C20orf202A1L168 122 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 SNURFLB1AK76 121 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 F8W735 103 aaPredicted RBP3.77□□□□□ -1.81
VRK3-226ENST00000602029 K7EQM0 130 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 HYPMO75409 117 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 TOMM40O96008 361 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 IGKV3-20P01619 116 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 IGLV2-8P01709 118 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 APOHP02749 345 aaPredicted RBP3.77□□□□□ -1.81
VRK3-226ENST00000602029 CTSGP08311 255 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 RBMY1A1P0DJD3 496 aaKnown RBP3.77□□□□□ -1.81
VRK3-226ENST00000602029 RBMY1CP0DJD4 496 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 PMCHP20382 165 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 RBMY1FQ15415 496 aaKnown RBP3.77□□□□□ -1.81
VRK3-226ENST00000602029 GFI1BQ5VTD9 330 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 ZNF600Q6ZNG1 722 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 POM121L12Q8N7R1 296 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 LINC00469Q8N7U9 141 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 TSKUQ8WUA8 353 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 ZNF503Q96F45 646 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 KCNS1Q96KK3 526 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 GPR82Q96P67 336 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 ATP6V0BQ99437 205 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 TXN2Q99757 166 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 MLST8Q9BVC4 326 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 C1QTNF4Q9BXJ3 329 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 ZNF331Q9NQX6 463 aaPredicted RBP3.77□□□□□ -1.81
VRK3-226ENST00000602029 OTORQ9NRC9 128 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 ZNF586Q9NXT0 402 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 XCL2Q9UBD3 114 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 NAGKQ9UJ70 344 aa3.77□□□□□ -1.81
VRK3-226ENST00000602029 IGKV1D-37A0A075B6S9 117 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 A8MWL6 223 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 C16orf90A8MZG2 172 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 NPIPB6E9PJ23 425 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 ZNF253O75346 499 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 SPART-AS1P0CW21 52 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 CRYBB3P26998 211 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 FXYD7P58549 80 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 SNRPD3P62318 126 aaKnown RBP3.76□□□□□ -1.81
VRK3-226ENST00000602029 SUMO1P63165 101 aaKnown RBP3.76□□□□□ -1.81
VRK3-226ENST00000602029 OR5I1Q13606 314 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 PMCHL1Q16048 86 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 KLK9Q2XQG4 91 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 PDZD11Q5EBL8 140 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 C1orf134Q5TEV5 83 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 SPATA31B1PQ5VZV4 182 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 TMEM136Q6ZRR5 245 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 LINC00305Q7Z4B0 112 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 ZNF575Q86XF7 245 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 BAGE3Q86Y29 109 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 BAGE2Q86Y30 109 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 OR8I2Q8N0Y5 310 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 TMEM75Q8N9X5 138 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 Q8NAQ8 132 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 GATD1Q8NB37 220 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 FXYD5Q96DB9 178 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 C14orf144Q96I85 54 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 ZNF414Q96IQ9 312 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 TMEM208Q9BTX3 173 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 KLK9Q9UKQ9 250 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 EPDR1Q9UM22 224 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 CELA1Q9UNI1 258 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 HIGD1AQ9Y241 93 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 ZFP30Q9Y2G7 519 aa3.76□□□□□ -1.81
VRK3-226ENST00000602029 DMBT1Q9UGM3 2413 aaPredicted RBP3.76□□□□□ -1.81
VRK3-226ENST00000602029 ZNF705GA8MUZ8 300 aaPredicted RBP3.75□□□□□ -1.81
VRK3-226ENST00000602029 I3L2K1 104 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 ZNF324O75467 553 aaPredicted RBP3.75□□□□□ -1.81
VRK3-226ENST00000602029 LTAP01374 205 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 APCSP02743 223 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 GPX1P07203 203 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 OR5AL1P0C617 328 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 NBEAP1P0C6P0 100 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 FOXA3P55318 350 aaPredicted RBP3.75□□□□□ -1.81
VRK3-226ENST00000602029 C12orf74Q32Q52 190 aa3.75□□□□□ -1.81
VRK3-226ENST00000602029 COX8CQ7Z4L0 72 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms