RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 RBAKDNA6NC62 111 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 L7N2F9 121 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 FGF7P21781 194 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 ASIPP42127 132 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 VAMP2P63027 116 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 CFAP126Q5VTH2 177 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 DEDD2Q8WXF8 326 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 OR51M1Q9H341 326 aa10.37□□□□□ -0.75
SSBP4-211ENST00000601614 C5orf51A6NDU8 294 aa10.36□□□□□ -0.75
SSBP4-211ENST00000601614 IGSF23A1L1A6 192 aa10.35□□□□□ -0.75
SSBP4-211ENST00000601614 LINC00694P0DN24 101 aa10.35□□□□□ -0.75
SSBP4-211ENST00000601614 Q9UF83 564 aa10.35□□□□□ -0.75
SSBP4-211ENST00000601614 LENEPQ9Y5L5 61 aa10.35□□□□□ -0.75
SSBP4-211ENST00000601614 IGKV2D-24A0A075B6R9 120 aa10.34□□□□□ -0.75
SSBP4-211ENST00000601614 GGTLC3B5MD39 225 aa10.34□□□□□ -0.75
SSBP4-211ENST00000601614 RANP62826 216 aaKnown RBP10.34□□□□□ -0.75
SSBP4-211ENST00000601614 MITD1Q8WV92 249 aa10.34□□□□□ -0.75
SSBP4-211ENST00000601614 PAXXQ9BUH6 204 aa10.34□□□□□ -0.75
SSBP4-211ENST00000601614 NPCDR1Q9BY65 106 aa10.34□□□□□ -0.75
SSBP4-211ENST00000601614 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
SSBP4-211ENST00000601614 DIRC3C9JPN6 131 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 F6UZH7 168 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 CSN1S1P47710 185 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 ZNF876PQ49A33 203 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 TOR2AQ5JU69 321 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 TMEM252Q8N6L7 170 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 TVP23CQ96ET8 276 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 MRPS26Q9BYN8 205 aaKnown RBP10.33□□□□□ -0.76
SSBP4-211ENST00000601614 RPH3ALQ9UNE2 315 aa10.33□□□□□ -0.76
SSBP4-211ENST00000601614 GAGE12JA6NER3 117 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 S100A11P31949 105 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 BTCP35070 178 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 SULT1A1P50225 295 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 GAGE1Q13065 139 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 GAGE4Q13068 117 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 GAGE5Q13069 117 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 ODF1Q14990 250 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 GAGE13Q4V321 117 aa10.32□□□□□ -0.76
SSBP4-211ENST00000601614 TRAV21A0A0B4J279 112 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 H3BMQ9 156 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 PANO1I0J062 215 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 TMBIM6P55061 237 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 Q6ZRU5 148 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 SDF2L1Q9HCN8 221 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 LYRM2Q9NU23 88 aaPredicted RBP10.31□□□□□ -0.76
SSBP4-211ENST00000601614 C11orf21Q9P2W6 132 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
SSBP4-211ENST00000601614 PGPEP1LA6NFU8 196 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 CIDEAO60543 219 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 MGST1P10620 155 aaKnown RBP10.3□□□□□ -0.76
SSBP4-211ENST00000601614 INPP1P49441 399 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 THAP6Q8TBB0 222 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 TMED6Q8WW62 240 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 RMI2Q96E14 147 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 BCL7BQ9BQE9 202 aa10.3□□□□□ -0.76
SSBP4-211ENST00000601614 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.3□□□□□ -0.76
SSBP4-211ENST00000601614 TRAV8-1A0A0A6YYK1 113 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 FAM25EA8MYX2 175 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 ZNF506Q5JVG8 444 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 NIT1Q86X76 327 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 ASB13Q8WXK3 278 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 HYLS1Q96M11 299 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 C9orf85Q96MD7 179 aa10.29□□□□□ -0.76
SSBP4-211ENST00000601614 NAP1L6A6NFF2 107 aa10.28□□□□□ -0.76
SSBP4-211ENST00000601614 OR7C2O60412 319 aa10.28□□□□□ -0.76
SSBP4-211ENST00000601614 ATRAIDQ6UW56 229 aa10.28□□□□□ -0.76
SSBP4-211ENST00000601614 UBE2WQ96B02 151 aa10.28□□□□□ -0.76
SSBP4-211ENST00000601614 KCNS1Q96KK3 526 aa10.28□□□□□ -0.76
SSBP4-211ENST00000601614 SAMD10Q9BYL1 202 aa10.28□□□□□ -0.76
SSBP4-211ENST00000601614 EIF3GO75821 320 aaKnown RBP eCLIP10.27□□□□□ -0.77
SSBP4-211ENST00000601614 UBE2L3P68036 154 aaKnown RBP10.27□□□□□ -0.77
SSBP4-211ENST00000601614 HBG1P69891 147 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 HBG2P69892 147 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 ATP6V1FQ16864 119 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 SPANXN2Q5MJ10 180 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 STX12Q86Y82 276 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 CYB561D1Q8N8Q1 229 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 TMEM75Q8N9X5 138 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 ATP5SQ99766 215 aa10.27□□□□□ -0.77
SSBP4-211ENST00000601614 ZNF80P51504 273 aaPredicted RBP10.26□□□□□ -0.77
SSBP4-211ENST00000601614 S100A10P60903 97 aa10.26□□□□□ -0.77
SSBP4-211ENST00000601614 IL15RAQ13261 267 aa10.26□□□□□ -0.77
SSBP4-211ENST00000601614 RAB32Q13637 225 aa10.26□□□□□ -0.77
SSBP4-211ENST00000601614 PARLQ9H300 379 aa10.26□□□□□ -0.77
SSBP4-211ENST00000601614 TREM1Q9NP99 234 aa10.26□□□□□ -0.77
SSBP4-211ENST00000601614 RNASE3P12724 160 aaKnown RBP10.25□□□□□ -0.77
SSBP4-211ENST00000601614 PVALBP20472 110 aaPredicted RBP10.25□□□□□ -0.77
SSBP4-211ENST00000601614 NHLH2Q02577 135 aa10.25□□□□□ -0.77
SSBP4-211ENST00000601614 GOLT1AQ6ZVE7 132 aa10.25□□□□□ -0.77
SSBP4-211ENST00000601614 C14orf178Q8N769 122 aaPredicted RBP10.25□□□□□ -0.77
SSBP4-211ENST00000601614 OR2T35Q8NGX2 323 aa10.25□□□□□ -0.77
SSBP4-211ENST00000601614 C2orf50Q96LR7 162 aa10.25□□□□□ -0.77
SSBP4-211ENST00000601614 A0A087WWC5 75 aa10.24□□□□□ -0.77
SSBP4-211ENST00000601614 PTH2Q96A98 100 aa10.24□□□□□ -0.77
SSBP4-211ENST00000601614 SGK494Q96LW2 274 aa10.24□□□□□ -0.77
SSBP4-211ENST00000601614 LINC00479Q96M42 142 aa10.24□□□□□ -0.77
SSBP4-211ENST00000601614 SH3BGRL3Q9H299 93 aa10.24□□□□□ -0.77
SSBP4-211ENST00000601614 URGCP-MRPS24S4R325 110 aa10.24□□□□□ -0.77
SSBP4-211ENST00000601614 PGPA6NDG6 321 aa10.23□□□□□ -0.77
SSBP4-211ENST00000601614 PRSS1P07477 247 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms