RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 FAM159AQ6UWV7 190 aa14.35□□□□□ -0.11
SHKBP1-222ENST00000600320 C11orf72Q8NBR9 251 aa14.35□□□□□ -0.11
SHKBP1-222ENST00000600320 TMEM263Q8WUH6 116 aaKnown RBP14.35□□□□□ -0.11
SHKBP1-222ENST00000600320 K7EN84 100 aa14.34□□□□□ -0.11
SHKBP1-222ENST00000600320 TYMSP04818 313 aa14.34□□□□□ -0.11
SHKBP1-222ENST00000600320 C16orf74Q96GX8 76 aa14.34□□□□□ -0.11
SHKBP1-222ENST00000600320 M0R036 132 aa14.33□□□□□ -0.12
SHKBP1-222ENST00000600320 ZNF493Q6ZR52 646 aa14.33□□□□□ -0.12
SHKBP1-222ENST00000600320 GSN-AS1Q9NRJ2 163 aa14.33□□□□□ -0.12
SHKBP1-222ENST00000600320 MDFICQ9P1T7 246 aa14.33□□□□□ -0.12
SHKBP1-222ENST00000600320 CELA1Q9UNI1 258 aa14.33□□□□□ -0.12
SHKBP1-222ENST00000600320 C19orf71A6NCJ1 209 aa14.32□□□□□ -0.12
SHKBP1-222ENST00000600320 ORM1P02763 201 aa14.32□□□□□ -0.12
SHKBP1-222ENST00000600320 SOHLH1Q5JUK2 328 aa14.32□□□□□ -0.12
SHKBP1-222ENST00000600320 ZNF575Q86XF7 245 aa14.32□□□□□ -0.12
SHKBP1-222ENST00000600320 SDF2L1Q9HCN8 221 aa14.32□□□□□ -0.12
SHKBP1-222ENST00000600320 TRGV11A0A075B6L2 103 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 IGHV3-16A0A0C4DH30 117 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 TMEM189A5PLL7 270 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 KRBOX1C9JBD0 128 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 SFTA3P0C7M3 94 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 RPL19P84098 196 aaKnown RBP14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 LINC01559Q495D7 138 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 FAM74A3Q4VXF1 159 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 UQCC3Q6UW78 93 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 IL17DQ8TAD2 202 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 KCNS1Q96KK3 526 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 LY96Q9Y6Y9 160 aa14.31□□□□□ -0.12
SHKBP1-222ENST00000600320 TMSB15BA0A087X1C1 80 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 B4DEV8 164 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 TCL1AP56279 114 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 IBA57Q5T440 356 aaKnown RBP14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 FAM222AQ5U5X8 452 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 LINC01551Q86U37 167 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 DKK2Q9UBU2 259 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 COL7A1Q02388 2944 aa14.3□□□□□ -0.12
SHKBP1-222ENST00000600320 GRIFINA4D1Z8 144 aa14.29□□□□□ -0.12
SHKBP1-222ENST00000600320 ZNF415Q09FC8 603 aa14.29□□□□□ -0.12
SHKBP1-222ENST00000600320 TMEM241Q24JQ0 296 aa14.29□□□□□ -0.12
SHKBP1-222ENST00000600320 NOP10Q9NPE3 64 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-222ENST00000600320 RPL23P62829 140 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-222ENST00000600320 RNASE7Q9H1E1 156 aaKnown RBP14.28□□□□□ -0.12
SHKBP1-222ENST00000600320 BIN3Q9NQY0 253 aa14.28□□□□□ -0.12
SHKBP1-222ENST00000600320 NAT8Q9UHE5 227 aa14.28□□□□□ -0.12
SHKBP1-222ENST00000600320 SNURFLB1AK76 121 aa14.27□□□□□ -0.13
SHKBP1-222ENST00000600320 RNASE3P12724 160 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-222ENST00000600320 NUDT10Q8NFP7 164 aa14.27□□□□□ -0.13
SHKBP1-222ENST00000600320 DAZAP1Q96EP5 407 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-222ENST00000600320 NUDT11Q96G61 164 aa14.27□□□□□ -0.13
SHKBP1-222ENST00000600320 TIMM8BQ9Y5J9 83 aaPredicted RBP14.27□□□□□ -0.13
SHKBP1-222ENST00000600320 TMEM218A2RU14 115 aa14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 CXorf65A6NEN9 183 aa14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 SPART-AS1P0CW21 52 aa14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 ADCYAP1P18509 176 aa14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 NANOS2P60321 138 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 DAZ2Q13117 558 aaKnown RBP14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 C11orf45Q8TAV5 145 aa14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 C9orf85Q96MD7 179 aa14.26□□□□□ -0.13
SHKBP1-222ENST00000600320 P01737 135 aa14.25□□□□□ -0.13
SHKBP1-222ENST00000600320 C12orf74Q32Q52 190 aa14.25□□□□□ -0.13
SHKBP1-222ENST00000600320 DNLZQ5SXM8 178 aa14.25□□□□□ -0.13
SHKBP1-222ENST00000600320 OR2D3Q8NGH3 330 aa14.25□□□□□ -0.13
SHKBP1-222ENST00000600320 LYRM9A8MSI8 78 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 SPINK4O60575 86 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 ASIPP42127 132 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 ADIRFQ15847 76 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 Q6ZTI0 123 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 FAM231DQ6ZW35 169 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 ISOC2Q96AB3 205 aa14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 MRPL16Q9NX20 251 aaKnown RBP14.24□□□□□ -0.13
SHKBP1-222ENST00000600320 H3BVH4 76 aa14.23□□□□□ -0.13
SHKBP1-222ENST00000600320 CXCL1P09341 107 aa14.23□□□□□ -0.13
SHKBP1-222ENST00000600320 GZMBP10144 247 aa14.23□□□□□ -0.13
SHKBP1-222ENST00000600320 LINC00612Q8N6U2 182 aa14.23□□□□□ -0.13
SHKBP1-222ENST00000600320 STAB2Q8WWQ8 2551 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 TRGV1A0A0A0MS02 117 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 GAGE12BA1L429 117 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 GAGE7O76087 117 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 ARMS2P0C7Q2 107 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 GAGE12FP0CL80 117 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 GAGE12GP0CL81 117 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 GAGE12IP0CL82 117 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 DEFB130BP0DP73 79 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 DEFB130AP0DP74 79 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 S100A4P26447 101 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 ERVFC1-1P60608 527 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 WWC2-AS2Q96NR7 200 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 SPXQ9BT56 116 aa14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 RPP21Q9H633 154 aaKnown RBP14.22□□□□□ -0.13
SHKBP1-222ENST00000600320 TEX48A0A1B0GUV7 120 aa14.21□□□□□ -0.13
SHKBP1-222ENST00000600320 GATCO43716 136 aaKnown RBP14.21□□□□□ -0.13
SHKBP1-222ENST00000600320 OSTCQ9NRP0 149 aa14.21□□□□□ -0.13
SHKBP1-222ENST00000600320 IL36BQ9NZH7 164 aa14.21□□□□□ -0.13
SHKBP1-222ENST00000600320 MUC4Q99102 2169 aa14.2□□□□□ -0.14
SHKBP1-222ENST00000600320 F8W036 122 aa14.2□□□□□ -0.14
SHKBP1-222ENST00000600320 M0R2P5 195 aa14.2□□□□□ -0.14
SHKBP1-222ENST00000600320 RPS20P60866 119 aaKnown RBP14.2□□□□□ -0.14
SHKBP1-222ENST00000600320 DAD1P61803 113 aa14.2□□□□□ -0.14
SHKBP1-222ENST00000600320 Q6ZTC4 211 aa14.2□□□□□ -0.14
SHKBP1-222ENST00000600320 SCRT2Q9NQ03 307 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms