RNA–Protein interactions for RNA: ENST00000599563.5

SH2D3A-208, Transcript of SH2 domain containing 3A, humanhuman

TSL 3

Gene SH2D3A, Length 845 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-208ENST00000599563 SMUG1Q53HV7 270 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 SAPCD1Q5SSQ6 148 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 Q6AWC8 147 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 TMEM183AQ8IXX5 376 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 FAM210BQ96KR6 192 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 SMIM7Q9BQ49 75 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 SMDT1Q9H4I9 107 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 C11orf21Q9P2W6 132 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 CELA1Q9UNI1 258 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 ZFP30Q9Y2G7 519 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 MUC4Q99102 2169 aa9.16□□□□□ -0.94
SH2D3A-208ENST00000599563 IGHV4-4A0A075B6R2 117 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 ZNF727A8MUV8 499 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 K7EN84 100 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 OR5I1Q13606 314 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 PRR27Q6MZM9 219 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 COX8CQ7Z4L0 72 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 TMEM256Q8N2U0 113 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 OCC1Q8TAD7 63 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 APLNQ9ULZ1 77 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 NACAE9PAV3 2078 aa9.15□□□□□ -0.94
SH2D3A-208ENST00000599563 ZNF705GA8MUZ8 300 aaPredicted RBP9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 SH2D1AO60880 128 aa9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 MGST1P10620 155 aaKnown RBP9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 EMP1P54849 157 aa9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 EIF4E3Q8N5X7 224 aaKnown RBP9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 NIPSNAP3BQ9BS92 247 aa9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 NDUFAF3Q9BU61 184 aa9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 DKK2Q9UBU2 259 aa9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 TP53TG3Q9ULZ0 132 aa9.14□□□□□ -0.95
SH2D3A-208ENST00000599563 HYDINQ4G0P3 5121 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 AZU1P20160 251 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 RPL19P84098 196 aaKnown RBP9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 FAM222AQ5U5X8 452 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 UQCC3Q6UW78 93 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 SLC7A5P1Q8MH63 180 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 LINC01587Q99440 93 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 C20orf144Q9BQM9 153 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 NAGKQ9UJ70 344 aa9.13□□□□□ -0.95
SH2D3A-208ENST00000599563 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 PFN1P07737 140 aaKnown RBP9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 P0DMU3 169 aa9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 FAM231AP0DMU4 169 aa9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 FAM231CP0DMU5 169 aa9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 ANXA2RQ3ZCQ2 193 aa9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 SOHLH1Q5JUK2 328 aa9.12□□□□□ -0.95
SH2D3A-208ENST00000599563 IGHV1OR15-1A0A075B7D0 117 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 IGKV3D-20A0A0C4DH25 116 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 C19orf71A6NCJ1 209 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 LYRM9A8MSI8 78 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 H7BYZ3 331 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 M0R036 132 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 TYMSP04818 313 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 HTN1P15515 57 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 LINC01551Q86U37 167 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 SMIM12Q96EX1 92 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 SDF2L1Q9HCN8 221 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 NAT8Q9UHE5 227 aa9.11□□□□□ -0.95
SH2D3A-208ENST00000599563 TMSB15BA0A087X1C1 80 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 GNRH2O43555 120 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 DAD1P61803 113 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 ADIRFQ15847 76 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 FAM74A3Q4VXF1 159 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 FAM162BQ5T6X4 162 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 ZNF493Q6ZR52 646 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 ZNF575Q86XF7 245 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 PYGO2Q9BRQ0 406 aa9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
SH2D3A-208ENST00000599563 PLAC8L1A1L4L8 177 aa9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 F8W036 122 aa9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 RNASE8Q8TDE3 154 aaKnown RBP9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 ISOC2Q96AB3 205 aa9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 C16orf74Q96GX8 76 aa9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 LY96Q9Y6Y9 160 aa9.09□□□□□ -0.95
SH2D3A-208ENST00000599563 GRIFINA4D1Z8 144 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 CBY3A6NI87 242 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 KRBOX1C9JBD0 128 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 ORM1P02763 201 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 LINC01559Q495D7 138 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 C11orf72Q8NBR9 251 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 NUDT10Q8NFP7 164 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 NUDT11Q96G61 164 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 LINC00467Q9BRT7 94 aa9.08□□□□□ -0.96
SH2D3A-208ENST00000599563 B4DEV8 164 aa9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 GZMBP10144 247 aa9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 TDRG1Q3Y452 100 aa9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 POM121L12Q8N7R1 296 aa9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 GSN-AS1Q9NRJ2 163 aa9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 MDFICQ9P1T7 246 aa9.07□□□□□ -0.96
SH2D3A-208ENST00000599563 EPPK1P58107 5090 aaKnown RBP9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 IGHV3-16A0A0C4DH30 117 aa9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 RNASE3P12724 160 aaKnown RBP9.06□□□□□ -0.96
SH2D3A-208ENST00000599563 HTN3P15516 51 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms