RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 Q8TAT8 98 aa9.92□□□□□ -0.82
SHKBP1-218ENST00000598907 ZFP30Q9Y2G7 519 aa9.92□□□□□ -0.82
SHKBP1-218ENST00000598907 C9JCJ5 164 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 IGKV3-20P01619 116 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 IGLV2-8P01709 118 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 GIG44P09565 113 aaPredicted RBP9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 NDUFA5Q16718 116 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 SAPCD1Q5SSQ6 148 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 PRNTQ86SH4 94 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 ZFAND2AQ8N6M9 145 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 MLST8Q9BVC4 326 aa9.91□□□□□ -0.82
SHKBP1-218ENST00000598907 TMEM218A2RU14 115 aa9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 KLLNB2CW77 178 aa9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 CRXO43186 299 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 FAM74A3Q4VXF1 159 aa9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 MORN3Q6PF18 240 aaPredicted RBP9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 TMEM183AQ8IXX5 376 aa9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 C18orf15Q96N68 181 aa9.9□□□□□ -0.82
SHKBP1-218ENST00000598907 SFTA3P0C7M3 94 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 TSPOP30536 169 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 LEPP41159 167 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 CDKN1BP46527 198 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 CENPWQ5EE01 88 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 BAGE2Q86Y30 109 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 SLC7A5P1Q8MH63 180 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 SMIM12Q96EX1 92 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 C8orf49Q96NF6 230 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 CELA1Q9UNI1 258 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 LY96Q9Y6Y9 160 aa9.89□□□□□ -0.83
SHKBP1-218ENST00000598907 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 M0R2Z0 102 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 GNG4P50150 75 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 CEBPGP53567 150 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 NUTF2P61970 127 aaKnown RBP9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 KIR3DS1Q14943 382 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 SPINK13Q1W4C9 94 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 ZNF674Q2M3X9 581 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 PRR9Q5T870 116 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 SMIM7Q9BQ49 75 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 NDFIP1Q9BT67 221 aa9.88□□□□□ -0.83
SHKBP1-218ENST00000598907 PGPEP1LA6NFU8 196 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 ADCYAP1P18509 176 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 CRIP1P50238 77 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 FXYD7P58549 80 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 SMUG1Q53HV7 270 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 C10orf91Q5T1B1 145 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 GFI1BQ5VTD9 330 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 SPATA12Q7Z6I5 190 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 CSNK1G2-AS1Q8NCQ2 148 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 OCC1Q8TAD7 63 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 ZC2HC1AQ96GY0 325 aa9.87□□□□□ -0.83
SHKBP1-218ENST00000598907 TRAV12-2A0A075B6T6 113 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 ZNF324O75467 553 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 GPX1P07203 203 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 ZNF80P51504 273 aaPredicted RBP9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 TMEM241Q24JQ0 296 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 Q6AWC8 147 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 NHLRC2Q8NBF2 726 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 NAT8Q9UHE5 227 aa9.86□□□□□ -0.83
SHKBP1-218ENST00000598907 C7orf71A4D174 169 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 K7EN84 100 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 GCGP01275 180 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 BTN1A1Q13410 526 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 C12orf74Q32Q52 190 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 LINC01551Q86U37 167 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 C20orf144Q9BQM9 153 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 SEC11CQ9BY50 192 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 SDF2L1Q9HCN8 221 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 XCL2Q9UBD3 114 aa9.85□□□□□ -0.83
SHKBP1-218ENST00000598907 J3KRW8 73 aa9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 MIFP14174 115 aa9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 RNASE4P34096 147 aaKnown RBP9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 RPL23P62829 140 aaKnown RBP9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 Q6ZQT7 251 aa9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 C1orf158Q8N1D5 194 aa9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 FAT1Q14517 4588 aa9.84□□□□□ -0.83
SHKBP1-218ENST00000598907 FLG2Q5D862 2391 aaPredicted RBP9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 SRRM2Q9UQ35 2752 aaKnown RBP9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 NACAE9PAV3 2078 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 C19orf71A6NCJ1 209 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 FABP5P3A8MUU1 101 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 F8W036 122 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 INSP01308 110 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 PFN1P07737 140 aaKnown RBP9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 NIPSNAP3BQ9BS92 247 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 BIN3Q9NQY0 253 aa9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 CARHSP1Q9Y2V2 147 aaKnown RBP9.83□□□□□ -0.84
SHKBP1-218ENST00000598907 HMCN2Q8NDA2 5059 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 TRAV12-3A0A0B4J271 114 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 TRAV21A0A0B4J279 112 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 OR5I1Q13606 314 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 FAM162BQ5T6X4 162 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 Q5VSD8 79 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 ZNF705AQ6ZN79 300 aaPredicted RBP9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 LINC00467Q9BRT7 94 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 C11orf21Q9P2W6 132 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 X6R8D5 127 aa9.82□□□□□ -0.84
SHKBP1-218ENST00000598907 KRBOX1C9JBD0 128 aa9.81□□□□□ -0.84
SHKBP1-218ENST00000598907 J3QL48 77 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms