RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 LAGE3Q14657 143 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 SLC25A29Q8N8R3 303 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 OR5C1Q8NGR4 320 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 TMED6Q8WW62 240 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 NUDT15Q9NV35 164 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 NAGKQ9UJ70 344 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 BOLA1Q9Y3E2 137 aa6.6□□□□□ -1.35
LIG1-209ENST00000596104 OR7C2O60412 319 aa6.59□□□□□ -1.35
LIG1-209ENST00000596104 TYMSP04818 313 aa6.59□□□□□ -1.35
LIG1-209ENST00000596104 KRTAP10-4P60372 401 aaPredicted RBP6.59□□□□□ -1.35
LIG1-209ENST00000596104 UBE2L3P68036 154 aaKnown RBP6.59□□□□□ -1.35
LIG1-209ENST00000596104 OR10J3Q5JRS4 329 aa6.59□□□□□ -1.35
LIG1-209ENST00000596104 LELP1Q5T871 98 aa6.59□□□□□ -1.35
LIG1-209ENST00000596104 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
LIG1-209ENST00000596104 WDR61Q9GZS3 305 aaKnown RBP6.59□□□□□ -1.35
LIG1-209ENST00000596104 TRAV21A0A0B4J279 112 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 TRBV6-4A0A1B0GX49 114 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 FBLL1A6NHQ2 334 aaKnown RBP6.58□□□□□ -1.36
LIG1-209ENST00000596104 RHOHQ15669 191 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 SERTAD4-AS1Q5TG53 156 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 DPPA3Q6W0C5 159 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 Q8N3U1 123 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 TM2D2Q9BX73 214 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 KCNIP2Q9NS61 270 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 HMCN2Q8NDA2 5059 aa6.58□□□□□ -1.36
LIG1-209ENST00000596104 LRP1Q07954 4544 aaKnown RBP6.57□□□□□ -1.36
LIG1-209ENST00000596104 F6UZH7 168 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 LECT2O14960 151 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 RS1O15537 224 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 CFAP126Q5VTH2 177 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 SCXQ7RTU7 201 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 HYLS1Q96M11 299 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 PRADC1Q9BSG0 188 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 GTSF1LQ9H1H1 148 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 SDF2L1Q9HCN8 221 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 OTORQ9NRC9 128 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 OR5AC2Q9NZP5 309 aa6.57□□□□□ -1.36
LIG1-209ENST00000596104 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.56□□□□□ -1.36
LIG1-209ENST00000596104 TRAV8-1A0A0A6YYK1 113 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 PGPA6NDG6 321 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 H0YIZ8 118 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 CIDEAO60543 219 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 EIF3GO75821 320 aaKnown RBP eCLIP6.56□□□□□ -1.36
LIG1-209ENST00000596104 H2AFB2P0C5Z0 115 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 ZNF876PQ49A33 203 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 LINC01620Q4KN68 170 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 KHDC3LQ587J8 217 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 GOLT1AQ6ZVE7 132 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 ATP6V0E2Q8NHE4 81 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 KCNS1Q96KK3 526 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 ATP5SQ99766 215 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 TREM1Q9NP99 234 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 C11orf21Q9P2W6 132 aa6.56□□□□□ -1.36
LIG1-209ENST00000596104 TRAV8-3A0A0A6YYJ7 113 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 IGHV3-73A0A0B4J1V6 119 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 C17orf112F2Z3M2 114 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 LINC00694P0DN24 101 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 FFAR4Q5NUL3 377 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 ARL6IP6Q8N6S5 226 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 SYT8Q8NBV8 401 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 CMTM2Q8TAZ6 248 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 ASB13Q8WXK3 278 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 RPH3ALQ9UNE2 315 aa6.55□□□□□ -1.36
LIG1-209ENST00000596104 PGPEP1LA6NFU8 196 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 SIX6O95475 246 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 OXTP01178 125 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 MGST1P10620 155 aaKnown RBP6.54□□□□□ -1.36
LIG1-209ENST00000596104 ZNF80P51504 273 aaPredicted RBP6.54□□□□□ -1.36
LIG1-209ENST00000596104 TAS2R45P59539 299 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 DAZ4Q86SG3 579 aaKnown RBP6.54□□□□□ -1.36
LIG1-209ENST00000596104 BAALCQ8WXS3 180 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 PTH2Q96A98 100 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 CHAC1Q9BUX1 264 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 DAZ3Q9NR90 486 aaKnown RBP6.54□□□□□ -1.36
LIG1-209ENST00000596104 MBD2Q9UBB5 411 aa6.54□□□□□ -1.36
LIG1-209ENST00000596104 GNG5P63218 68 aa6.53□□□□□ -1.36
LIG1-209ENST00000596104 ASAH1Q13510 395 aa6.53□□□□□ -1.36
LIG1-209ENST00000596104 LRRC37A5PQ49AS3 106 aa6.53□□□□□ -1.36
LIG1-209ENST00000596104 ZNF506Q5JVG8 444 aa6.53□□□□□ -1.36
LIG1-209ENST00000596104 FAM74A1Q5RGS3 127 aa6.53□□□□□ -1.36
LIG1-209ENST00000596104 NMES1Q9C002 83 aa6.53□□□□□ -1.36
LIG1-209ENST00000596104 FAM240BA0A1B0GVZ2 78 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 RNF222A6NCQ9 220 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 RNASE3P12724 160 aaKnown RBP6.52□□□□□ -1.37
LIG1-209ENST00000596104 TOR2AQ5JU69 321 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 TMEM75Q8N9X5 138 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 CIRBP-AS1Q8TBR5 109 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 SGK494Q96LW2 274 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 PARLQ9H300 379 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 Q9UF83 564 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 PLA2G2DQ9UNK4 145 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 COX11Q9Y6N1 276 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 FAT3Q8TDW7 4589 aa6.52□□□□□ -1.37
LIG1-209ENST00000596104 GAGE12JA6NER3 117 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 RBFOX3A6NFN3 312 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 GGTLC3B5MD39 225 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 GAGE1Q13065 139 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 GAGE4Q13068 117 aa6.51□□□□□ -1.37
LIG1-209ENST00000596104 GAGE5Q13069 117 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms