RNA–Protein interactions for RNA: ENST00000590559.2

CLIP3-204, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 4

Gene CLIP3, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-204ENST00000590559 IGHV3-38A0A0C4DH36 116 aa7.84□□□□□ -1.15
CLIP3-204ENST00000590559 LRRC37A5PQ49AS3 106 aa7.84□□□□□ -1.15
CLIP3-204ENST00000590559 KHDC3LQ587J8 217 aa7.84□□□□□ -1.15
CLIP3-204ENST00000590559 MZT2BQ6NZ67 158 aa7.84□□□□□ -1.15
CLIP3-204ENST00000590559 OTORQ9NRC9 128 aa7.84□□□□□ -1.15
CLIP3-204ENST00000590559 NDUFA13Q9P0J0 144 aa7.84□□□□□ -1.15
CLIP3-204ENST00000590559 CYCSP99999 105 aaKnown RBP7.83□□□□□ -1.16
CLIP3-204ENST00000590559 FFAR4Q5NUL3 377 aa7.83□□□□□ -1.16
CLIP3-204ENST00000590559 SLC25A29Q8N8R3 303 aa7.83□□□□□ -1.16
CLIP3-204ENST00000590559 PPP1R1CQ8WVI7 109 aa7.83□□□□□ -1.16
CLIP3-204ENST00000590559 FAM30AQ9NZY2 134 aa7.83□□□□□ -1.16
CLIP3-204ENST00000590559 HSPB11Q9Y547 144 aa7.83□□□□□ -1.16
CLIP3-204ENST00000590559 IGLV5-52A0A0A0MRZ9 124 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 TRAV8-1A0A0A6YYK1 113 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 TRAV21A0A0B4J279 112 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 PGPA6NDG6 321 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 FAM229AH3BQW9 127 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 EIF3GO75821 320 aaKnown RBP eCLIP7.82□□□□□ -1.16
CLIP3-204ENST00000590559 C1QBP02746 253 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 TAS2R45P59539 299 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 HAMPP81172 84 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 IFITM3Q01628 133 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 DPPA3Q6W0C5 159 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 Q8N814 137 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 HYLS1Q96M11 299 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 C11orf21Q9P2W6 132 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 MBD2Q9UBB5 411 aa7.82□□□□□ -1.16
CLIP3-204ENST00000590559 TRBV6-4A0A1B0GX49 114 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 RS1O15537 224 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 CIDEAO60543 219 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 MPC2O95563 127 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 CFAP126Q5VTH2 177 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 PQLC2Q6ZP29 291 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 GOLT1AQ6ZVE7 132 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 PTH2Q96A98 100 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 KCNS1Q96KK3 526 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 WFDC1Q9HC57 220 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 NAGKQ9UJ70 344 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 BOLA1Q9Y3E2 137 aa7.81□□□□□ -1.16
CLIP3-204ENST00000590559 FBLL1A6NHQ2 334 aaKnown RBP7.8□□□□□ -1.16
CLIP3-204ENST00000590559 F6UZH7 168 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 PFN1P07737 140 aaKnown RBP7.8□□□□□ -1.16
CLIP3-204ENST00000590559 ZNF80P51504 273 aaPredicted RBP7.8□□□□□ -1.16
CLIP3-204ENST00000590559 Q6ZSA8 131 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 Q6ZSN1 163 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 SUN5Q8TC36 379 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 S100ZQ8WXG8 99 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 ASB13Q8WXK3 278 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 C9orf85Q96MD7 179 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 MARVELD1Q9BSK0 173 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 SDF2L1Q9HCN8 221 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 TREM1Q9NP99 234 aa7.8□□□□□ -1.16
CLIP3-204ENST00000590559 HMCN2Q8NDA2 5059 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 PSCAO43653 123 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 UPK1BO75841 260 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 LINC00694P0DN24 101 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 RPL12P30050 165 aaKnown RBP7.79□□□□□ -1.16
CLIP3-204ENST00000590559 PPT1P50897 306 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 GNG5P63218 68 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 LAGE3Q14657 143 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 ZNF876PQ49A33 203 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 FAM74A1Q5RGS3 127 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 LELP1Q5T871 98 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 NHLRC2Q8NBF2 726 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 CMTM2Q8TAZ6 248 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 ENKURQ8TC29 256 aa7.79□□□□□ -1.16
CLIP3-204ENST00000590559 TRAV8-6A0A0B4J262 113 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 INMT-MINDY4F8WBC2 141 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 IGLV2-11P01706 119 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 RNASE3P12724 160 aaKnown RBP7.78□□□□□ -1.16
CLIP3-204ENST00000590559 RAB2AP61019 212 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 WFDC2Q14508 124 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 RHOHQ15669 191 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 SCGB1C1Q8TD33 95 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 SMIM3Q9BZL3 60 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 GTSF1LQ9H1H1 148 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 RPH3ALQ9UNE2 315 aa7.78□□□□□ -1.16
CLIP3-204ENST00000590559 SERTM2A0A1B0GWG4 89 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 PGPEP1LA6NFU8 196 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 ACOT6Q3I5F7 207 aaPredicted RBP7.77□□□□□ -1.17
CLIP3-204ENST00000590559 OR10J3Q5JRS4 329 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 ZNF506Q5JVG8 444 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 Q8N3U1 123 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 SGK494Q96LW2 274 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 PRADC1Q9BSG0 188 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 Q9HAA7 133 aa7.77□□□□□ -1.17
CLIP3-204ENST00000590559 A0A1W2PPV4 95 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 TAAR5O14804 337 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 IGHV3-30P01768 117 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 IGHV3-33P01772 117 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 TCRAP04437 139 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 STAG3L2P0CL84 134 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 STAG3L3P0CL85 134 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 PET100P0DJ07 73 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 ARL14EPLP0DKL9 152 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 IGHV3-30-3P0DP02 117 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 IGHV3-30-5P0DP03 117 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 MGST1P10620 155 aaKnown RBP7.76□□□□□ -1.17
CLIP3-204ENST00000590559 TMEM75Q8N9X5 138 aa7.76□□□□□ -1.17
CLIP3-204ENST00000590559 IGHV3-73A0A0B4J1V6 119 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms