RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 NDUFS6O75380 124 aaKnown RBP13.68□□□□□ -0.22
DDX39A-214ENST00000590556 CRIP1P50238 77 aa13.68□□□□□ -0.22
DDX39A-214ENST00000590556 C11orf72Q8NBR9 251 aa13.68□□□□□ -0.22
DDX39A-214ENST00000590556 GNRH2O43555 120 aa13.67□□□□□ -0.22
DDX39A-214ENST00000590556 SH2D1AO60880 128 aa13.67□□□□□ -0.22
DDX39A-214ENST00000590556 CEBPGP53567 150 aa13.67□□□□□ -0.22
DDX39A-214ENST00000590556 ZNF674Q2M3X9 581 aa13.67□□□□□ -0.22
DDX39A-214ENST00000590556 IBA57Q5T440 356 aaKnown RBP13.67□□□□□ -0.22
DDX39A-214ENST00000590556 ORM1P02763 201 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 SRP19P09132 144 aaKnown RBP13.66□□□□□ -0.22
DDX39A-214ENST00000590556 ZNF415Q09FC8 603 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 DAZ2Q13117 558 aaKnown RBP13.66□□□□□ -0.22
DDX39A-214ENST00000590556 PEA15Q15121 130 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 C12orf74Q32Q52 190 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 CLLU1Q5K131 121 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 PARLQ9H300 379 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 MDFICQ9P1T7 246 aa13.66□□□□□ -0.22
DDX39A-214ENST00000590556 TYMSP04818 313 aa13.65□□□□□ -0.22
DDX39A-214ENST00000590556 MGST1P10620 155 aaKnown RBP13.65□□□□□ -0.22
DDX39A-214ENST00000590556 TCL1AP56279 114 aa13.65□□□□□ -0.22
DDX39A-214ENST00000590556 DAD1P61803 113 aa13.65□□□□□ -0.22
DDX39A-214ENST00000590556 TRBV20OR9-2A0A075B6H5 130 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 IGHV3-16A0A0C4DH30 117 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 C3orf84H3BNL1 204 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 IGLV2-8P01709 118 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 DEFB130BP0DP73 79 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 DEFB130AP0DP74 79 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 ZFAND6Q6FIF0 208 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 PRR27Q6MZM9 219 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 SMIM12Q96EX1 92 aa13.64□□□□□ -0.23
DDX39A-214ENST00000590556 IGKV3D-20A0A0C4DH25 116 aa13.63□□□□□ -0.23
DDX39A-214ENST00000590556 B4DEV8 164 aa13.63□□□□□ -0.23
DDX39A-214ENST00000590556 SRSF3P84103 164 aaKnown RBP13.63□□□□□ -0.23
DDX39A-214ENST00000590556 Q6ZTC4 211 aa13.63□□□□□ -0.23
DDX39A-214ENST00000590556 PHLDA1Q8WV24 401 aaPredicted RBP13.63□□□□□ -0.23
DDX39A-214ENST00000590556 SMDT1Q9H4I9 107 aa13.63□□□□□ -0.23
DDX39A-214ENST00000590556 PGPEP1LA6NFU8 196 aa13.62□□□□□ -0.23
DDX39A-214ENST00000590556 KRBOX1C9JBD0 128 aa13.62□□□□□ -0.23
DDX39A-214ENST00000590556 C9JCJ5 164 aa13.62□□□□□ -0.23
DDX39A-214ENST00000590556 M0R036 132 aa13.62□□□□□ -0.23
DDX39A-214ENST00000590556 TRGV1A0A0A0MS02 117 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 GAGE12BA1L429 117 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 C9JQL5 133 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 SPINK4O60575 86 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 GAGE7O76087 117 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 GAGE12FP0CL80 117 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 GAGE12GP0CL81 117 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 GAGE12IP0CL82 117 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 LINC01559Q495D7 138 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 SMIM7Q9BQ49 75 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 SPXQ9BT56 116 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 BIN3Q9NQY0 253 aa13.61□□□□□ -0.23
DDX39A-214ENST00000590556 TRAV10A0A0B4J240 114 aa13.6□□□□□ -0.23
DDX39A-214ENST00000590556 OR5I1Q13606 314 aa13.6□□□□□ -0.23
DDX39A-214ENST00000590556 Q6ZTI0 123 aa13.6□□□□□ -0.23
DDX39A-214ENST00000590556 OCC1Q8TAD7 63 aa13.6□□□□□ -0.23
DDX39A-214ENST00000590556 DAZAP1Q96EP5 407 aaKnown RBP13.6□□□□□ -0.23
DDX39A-214ENST00000590556 TMSB15BA0A087X1C1 80 aa13.59□□□□□ -0.23
DDX39A-214ENST00000590556 ZNF727A8MUV8 499 aa13.59□□□□□ -0.23
DDX39A-214ENST00000590556 S100A4P26447 101 aaKnown RBP13.59□□□□□ -0.23
DDX39A-214ENST00000590556 ASIPP42127 132 aa13.59□□□□□ -0.23
DDX39A-214ENST00000590556 LGALS9BQ3B8N2 356 aa13.59□□□□□ -0.23
DDX39A-214ENST00000590556 CEMP1Q6PRD7 247 aaPredicted RBP13.59□□□□□ -0.23
DDX39A-214ENST00000590556 LINC00612Q8N6U2 182 aa13.59□□□□□ -0.23
DDX39A-214ENST00000590556 MRPL16Q9NX20 251 aaKnown RBP13.59□□□□□ -0.23
DDX39A-214ENST00000590556 GRIFINA4D1Z8 144 aa13.58□□□□□ -0.24
DDX39A-214ENST00000590556 NUPR2A6NF83 97 aa13.58□□□□□ -0.24
DDX39A-214ENST00000590556 HTN3P15516 51 aa13.58□□□□□ -0.24
DDX39A-214ENST00000590556 FAM74A3Q4VXF1 159 aa13.58□□□□□ -0.24
DDX39A-214ENST00000590556 CASC10Q5T4H9 136 aa13.58□□□□□ -0.24
DDX39A-214ENST00000590556 TRGV2A0A075B6R0 118 aa13.57□□□□□ -0.24
DDX39A-214ENST00000590556 DEFB131BA0A096LNP1 70 aa13.57□□□□□ -0.24
DDX39A-214ENST00000590556 K7EN84 100 aa13.57□□□□□ -0.24
DDX39A-214ENST00000590556 M0R2P5 195 aa13.57□□□□□ -0.24
DDX39A-214ENST00000590556 RPL19P84098 196 aaKnown RBP13.57□□□□□ -0.24
DDX39A-214ENST00000590556 C9orf85Q96MD7 179 aa13.57□□□□□ -0.24
DDX39A-214ENST00000590556 LY96Q9Y6Y9 160 aa13.57□□□□□ -0.24
DDX39A-214ENST00000590556 C19orf71A6NCJ1 209 aa13.56□□□□□ -0.24
DDX39A-214ENST00000590556 ATP5G1P05496 136 aa13.56□□□□□ -0.24
DDX39A-214ENST00000590556 RNASE3P12724 160 aaKnown RBP13.56□□□□□ -0.24
DDX39A-214ENST00000590556 DNLZQ5SXM8 178 aa13.56□□□□□ -0.24
DDX39A-214ENST00000590556 KLK5Q9Y337 293 aaPredicted RBP13.56□□□□□ -0.24
DDX39A-214ENST00000590556 CSMD3Q7Z407 3707 aa13.55□□□□□ -0.24
DDX39A-214ENST00000590556 P01737 135 aa13.55□□□□□ -0.24
DDX39A-214ENST00000590556 SOHLH1Q5JUK2 328 aa13.55□□□□□ -0.24
DDX39A-214ENST00000590556 ZNF575Q86XF7 245 aa13.55□□□□□ -0.24
DDX39A-214ENST00000590556 RASL10AQ92737 203 aa13.55□□□□□ -0.24
DDX39A-214ENST00000590556 H3BVH4 76 aa13.54□□□□□ -0.24
DDX39A-214ENST00000590556 TMEM241Q24JQ0 296 aa13.54□□□□□ -0.24
DDX39A-214ENST00000590556 NUDT10Q8NFP7 164 aa13.54□□□□□ -0.24
DDX39A-214ENST00000590556 OR2D3Q8NGH3 330 aa13.54□□□□□ -0.24
DDX39A-214ENST00000590556 NUDT11Q96G61 164 aa13.54□□□□□ -0.24
DDX39A-214ENST00000590556 IL36BQ9NZH7 164 aa13.54□□□□□ -0.24
DDX39A-214ENST00000590556 F5H768 121 aa13.53□□□□□ -0.24
DDX39A-214ENST00000590556 CXCL1P09341 107 aa13.53□□□□□ -0.24
DDX39A-214ENST00000590556 ARMS2P0C7Q2 107 aa13.53□□□□□ -0.24
DDX39A-214ENST00000590556 RPS20P60866 119 aaKnown RBP13.53□□□□□ -0.24
DDX39A-214ENST00000590556 ZNF876PQ49A33 203 aa13.53□□□□□ -0.24
DDX39A-214ENST00000590556 LINC01551Q86U37 167 aa13.53□□□□□ -0.24
DDX39A-214ENST00000590556 C18orf15Q96N68 181 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms