RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 C5orf17Q8NAS9 161 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 TVP23CQ96ET8 276 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 C18orf15Q96N68 181 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 TMEM167BQ9NRX6 74 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 RPH3ALQ9UNE2 315 aa7.84□□□□□ -1.15
SMAD4-211ENST00000590499 CTXND1A0A1B0GTU2 59 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 SERTM2A0A1B0GWG4 89 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 GAGE12BA1L429 117 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 HMSDA8MTL9 139 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 SPINK4O60575 86 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 GAGE7O76087 117 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 TCRAP04437 139 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 GAGE12FP0CL80 117 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 GAGE12GP0CL81 117 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 GAGE12IP0CL82 117 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 KLF12Q9Y4X4 402 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 DYNC1H1Q14204 4646 aaKnown RBP7.83□□□□□ -1.16
SMAD4-211ENST00000590499 PKHD1P08F94 4074 aa7.83□□□□□ -1.16
SMAD4-211ENST00000590499 A0A1W2PRE2 83 aa7.82□□□□□ -1.16
SMAD4-211ENST00000590499 IGLV2-11P01706 119 aa7.82□□□□□ -1.16
SMAD4-211ENST00000590499 TDRG1Q3Y452 100 aa7.82□□□□□ -1.16
SMAD4-211ENST00000590499 RNF212Q495C1 297 aa7.82□□□□□ -1.16
SMAD4-211ENST00000590499 AKR1C8PQ5T2L2 129 aa7.82□□□□□ -1.16
SMAD4-211ENST00000590499 ARPC5LQ9BPX5 153 aa7.82□□□□□ -1.16
SMAD4-211ENST00000590499 DNAH11Q96DT5 4516 aa7.81□□□□□ -1.16
SMAD4-211ENST00000590499 TRGV1A0A0A0MS02 117 aa7.81□□□□□ -1.16
SMAD4-211ENST00000590499 SUMO1P63165 101 aaKnown RBP7.81□□□□□ -1.16
SMAD4-211ENST00000590499 MUC21Q5SSG8 566 aa7.81□□□□□ -1.16
SMAD4-211ENST00000590499 SGK494Q96LW2 274 aa7.81□□□□□ -1.16
SMAD4-211ENST00000590499 TREM1Q9NP99 234 aa7.81□□□□□ -1.16
SMAD4-211ENST00000590499 EPDR1Q9UM22 224 aa7.81□□□□□ -1.16
SMAD4-211ENST00000590499 PKD1P98161 4303 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 TRAV26-1A0A087WT03 109 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 F6UZH7 168 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 BCL2L11O43521 198 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 FGF8P55075 233 aaPredicted RBP7.8□□□□□ -1.16
SMAD4-211ENST00000590499 ZNF415Q09FC8 603 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 LGALS9BQ3B8N2 356 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 CYB561D1Q8N8Q1 229 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 TMEM75Q8N9X5 138 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 ATG101Q9BSB4 218 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 MDFICQ9P1T7 246 aa7.8□□□□□ -1.16
SMAD4-211ENST00000590499 TRGV2A0A075B6R0 118 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 TRAV21A0A0B4J279 112 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 A0A0D9SG52 128 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 MAP1LC3B2A6NCE7 125 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 FAM74A7A6NL05 159 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 H3BNG1 76 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 NUDT3O95989 172 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 SEC11BP0C7V7 166 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 FHITP49789 147 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 ZNF80P51504 273 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-211ENST00000590499 FAM3BP58499 235 aaPredicted RBP7.79□□□□□ -1.16
SMAD4-211ENST00000590499 OR5I1Q13606 314 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 TMEM183BQ1AE95 376 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 FAM159AQ6UWV7 190 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 Q6ZR54 194 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 IQCF2Q8IXL9 164 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 TMEM183AQ8IXX5 376 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 VSIG2Q96IQ7 327 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 MAP1LC3BQ9GZQ8 125 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 MRPL16Q9NX20 251 aaKnown RBP7.79□□□□□ -1.16
SMAD4-211ENST00000590499 PSG8Q9UQ74 426 aa7.79□□□□□ -1.16
SMAD4-211ENST00000590499 TRGV11A0A075B6L2 103 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 IGHV3-16A0A0C4DH30 117 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 FBLL1A6NHQ2 334 aaKnown RBP7.78□□□□□ -1.16
SMAD4-211ENST00000590499 K7EQM0 130 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 UBE2G2P60604 165 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 FLI1Q01543 452 aaPredicted RBP7.78□□□□□ -1.16
SMAD4-211ENST00000590499 Q6ZNX1 250 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 RASL10AQ92737 203 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 NDFIP1Q9BT67 221 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 C11orf21Q9P2W6 132 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 NAGKQ9UJ70 344 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 HERC2O95714 4834 aa7.78□□□□□ -1.16
SMAD4-211ENST00000590499 IGLV2-18A0A075B6J9 118 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 A0A0J9YY99 117 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 KANTRA0A1W2PQU2 76 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 GNRH2O43555 120 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 TYMSP04818 313 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 TMUB2Q71RG4 321 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 TCTE3Q8IZS6 198 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 ZNRF2Q8NHG8 242 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 LINC00479Q96M42 142 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 SPXQ9BT56 116 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 ZNF471Q9BX82 626 aaPredicted RBP7.77□□□□□ -1.17
SMAD4-211ENST00000590499 NKX6-2Q9C056 277 aaPredicted RBP7.77□□□□□ -1.17
SMAD4-211ENST00000590499 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.17
SMAD4-211ENST00000590499 TRAV34A0A0B4J273 112 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 UMAD1C9J7I0 102 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 M0R2N4 97 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 PEX7O00628 323 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 RTL8CO15255 209 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 GCGP01275 180 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 PFN1P07737 140 aaKnown RBP7.76□□□□□ -1.17
SMAD4-211ENST00000590499 SMUG1Q53HV7 270 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 PRNTQ86SH4 94 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 Q86TA4 180 aa7.76□□□□□ -1.17
SMAD4-211ENST00000590499 STOML3Q8TAV4 291 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 414.3 ms